Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06406 Corylus avellana HOM05D005633 ORTHO05D007003 1.2e-118 429.9 219 100.0
Cfa000508 Carpinus fangiana HOM05D005633 ORTHO05D007003 4.7e-91 338.2 204 87.3
CiPaw.09G062100 Carya illinoinensis HOM05D005633 ORTHO05D007003 6.4e-80 301.2 204 78.9
QL05p041669 Quercus lobata HOM05D005633 ORTHO05D007003 1.4e-79 300.1 203 78.8
RcHm_v2.0_Chr5g0008891 Rosa chinensis HOM05D005633 ORTHO05D007003 5.8e-73 278.1 204 72.1
FAN11G1234 Fragaria x ananassa HOM05D005633 ORTHO05D007003 3.9e-69 265.4 204 70.1
FvH4_3g08860 Fragaria vesca HOM05D005633 ORTHO05D007003 1.5e-68 263.5 204 69.1
FAN21G3099 Fragaria x ananassa HOM05D005633 ORTHO05D007003 1.9e-68 263.1 204 69.1
MD10G1291600 Malus domestica HOM05D005633 ORTHO05D007003 9.6e-68 260.8 205 67.8
FAN25G1993 Fragaria x ananassa HOM05D005633 ORTHO05D007003 8.1e-67 257.7 204 68.6
CANSAT35G1988 Cannabis sativa HOM05D005633 ORTHO05D007003 1.3e-64 250.4 206 66.0
Duzib235G0140 Durio zibethinus HOM05D005633 ORTHO05D007003 7.1e-63 244.6 205 67.3
Sabra04G0029300 Salix brachista HOM05D005633 ORTHO05D007003 7.1e-63 244.6 186 69.9
Lj2C290G9 Lonicera japonica HOM05D005633 ORTHO05D007003 6.0e-62 241.5 200 66.5
Thecc.06G183700 Theobroma cacao HOM05D005633 ORTHO05D007003 1.0e-61 240.7 205 66.8
Potri.004G046900 Populus trichocarpa HOM05D005633 ORTHO05D007003 2.3e-61 239.6 186 69.9
Actinidia07591 Actinidia chinensis HOM05D005633 ORTHO05D007003 3.9e-61 238.8 185 70.8
TAR629G0889 Trochodendron aralioides HOM05D005633 ORTHO05D007003 6.7e-61 238.0 193 69.9
Atru.chr10.1839_Atru.chr10.1840 Acer truncatum HOM05D005633 ORTHO05D007003 1.1e-60 237.3 205 64.4
TWI63G0225 Tripterygium wilfordii HOM05D005633 ORTHO05D007003 1.9e-60 236.5 209 64.1
ClCG01G023110 Citrullus lanatus HOM05D005633 ORTHO05D007003 4.3e-60 235.3 186 67.7
Cc02_g13630 Coffea canephora HOM05D005633 ORTHO05D007003 9.6e-60 234.2 185 68.1
Gohir.D06G133500 Gossypium hirsutum HOM05D005633 ORTHO05D007003 2.1e-59 233.0 205 64.9
GSVIVG01021090001 Vitis vinifera HOM05D005633 ORTHO05D007003 2.8e-59 232.6 208 64.9
Ca_00349_v3 Cicer arietinum L. HOM05D005633 ORTHO05D007003 6.3e-59 231.5 206 62.1
Gohir.A06G129500 Gossypium hirsutum HOM05D005633 ORTHO05D007003 1.4e-58 230.3 205 64.4
Hma1.2p1_0208F.1_g088340 Hydrangea macrophylla HOM05D005633 ORTHO05D007003 1.8e-58 229.9 186 68.8
Hma1.2p1_0208F.1_g088350 Hydrangea macrophylla HOM05D005633 ORTHO05D007003 1.8e-58 229.9 186 68.8
Oeu029366.1 Olea europaea HOM05D005633 ORTHO05D007003 2.4e-58 229.6 210 62.9
Gorai.010G155400 Gossypium raimondii HOM05D005633 ORTHO05D007003 4.1e-58 228.8 205 63.9
Manes.17G047800 Manihot esculenta HOM05D005633 ORTHO05D007003 1.2e-57 227.3 186 66.1
Potri.011G056100 Populus trichocarpa HOM05D005633 ORTHO05D007003 1.2e-57 227.3 205 62.0
DCAR_004057 Daucus carota HOM05D005633 ORTHO05D007003 1.5e-57 226.9 185 65.4
Medtr2g014210 Medicago truncatula HOM05D005633 ORTHO05D007003 5.9e-57 224.9 206 60.7
Rhsim02G0132600 Rhododendron simsii HOM05D005633 ORTHO05D007003 7.6e-57 224.6 209 59.8
arahy.Tifrunner.gnm1.ann1.U0Q0B6 Arachis hypogaea HOM05D005633 ORTHO05D007003 1.3e-56 223.8 204 61.3
arahy.Tifrunner.gnm1.ann1.QNV263 Arachis hypogaea HOM05D005633 ORTHO05D007003 1.7e-56 223.4 204 61.3
FAN16G2481 Fragaria x ananassa HOM05D005633 ORTHO05D007003 1.7e-56 223.4 204 61.3
Cpa.g.sc373.8 Carica papaya HOM05D005633 ORTHO05D007003 2.9e-56 222.6 205 59.5
Psat1g203720 Pisum sativum HOM05D005633 ORTHO05D007003 2.9e-56 222.6 206 59.7
MELO3C007272.2 Cucumis melo HOM05D005633 ORTHO05D007003 5.0e-56 221.9 187 64.7
CsaV3_6G050250 Cucumis sativus L. HOM05D005633 ORTHO05D007003 8.5e-56 221.1 187 64.7
Lj6g0019345 Lotus japonicus HOM05D005633 ORTHO05D007003 1.1e-55 220.7 220 56.8
COL.COLO4_31438 Corchorus olitorius HOM05D005633 ORTHO05D007003 1.9e-55 219.9 233 57.9
Sed0020009 Sechium edule HOM05D005633 ORTHO05D007003 1.9e-55 219.9 186 64.0
SalBow8G0351 Salvia bowleyana HOM05D005633 ORTHO05D007003 4.2e-55 218.8 184 63.0
Lalb_Chr18g0059461 Lupinus albus HOM05D005633 ORTHO05D007003 7.2e-55 218.0 206 58.7
Migut.M01122 Erythranthe guttata HOM05D005633 ORTHO05D007003 3.6e-54 215.7 187 63.1
vmacro15920 Vaccinium macrocarpon HOM05D005633 ORTHO05D007003 4.6e-54 215.3 195 61.5
Nitab4.5_0016285g0010 Nicotiana tabacum HOM05D005633 ORTHO05D007003 7.9e-54 214.5 185 64.3
Sopen02g022750 Solanum pennellii HOM05D005633 ORTHO05D007003 7.9e-54 214.5 185 63.8
Nitab4.5_0002219g0050 Nicotiana tabacum HOM05D005633 ORTHO05D007003 1.3e-53 213.8 185 64.3
Solyc02g077900.4 Solanum lycopersicum HOM05D005633 ORTHO05D007003 2.3e-53 213.0 185 63.8
TPR.G16498 Trifolium pratense HOM05D005633 ORTHO05D007003 3.9e-53 212.2 186 61.3
Nn1g04161 Nelumbo nucifera HOM05D005633 ORTHO05D007003 5.1e-53 211.8 185 67.0
Phvul.006G183800 Phaseolus vulgaris HOM05D005633 ORTHO05D007003 6.7e-53 211.5 206 59.7
PGSC0003DMG400029731 Solanum tuberosum HOM05D005633 ORTHO05D007003 1.9e-52 209.9 190 62.1
Peaxi162Scf01100g00118 Petunia axillaris HOM05D005633 ORTHO05D007003 4.3e-52 208.8 180 62.8
Glyma.13G237200 Glycine max HOM05D005633 ORTHO05D007003 5.7e-52 208.4 206 58.7
Sabra11G0038100 Salix brachista HOM05D005633 ORTHO05D007003 1.6e-51 206.8 197 59.4
CARHR027810 Cardamine hirsuta HOM05D005633 ORTHO05D007003 2.2e-51 206.5 209 58.4
THA.LOC104820553 Tarenaya hassleriana HOM05D005633 ORTHO05D007003 2.2e-51 206.5 210 58.6
CAN.G529.25 Capsicum annuum HOM05D005633 ORTHO05D007003 4.8e-51 205.3 185 60.5
PSO675G0497 Papaver somniferum HOM05D005633 ORTHO05D007003 8.2e-51 204.5 193 61.7
Sp1g24540 Schrenkiella parvula HOM05D005633 ORTHO05D007003 1.1e-50 204.1 211 57.8
A09p37740 Brassica napus HOM05D005633 ORTHO05D007003 1.4e-50 203.8 214 56.5
BraA09t39286Z Brassica rapa HOM05D005633 ORTHO05D007003 1.4e-50 203.8 211 57.3
VMungo0540G1564 Vigna mungo HOM05D005633 ORTHO05D007003 1.4e-50 203.8 207 58.0
Atru.chr10.1822_Atru.chr10.1823 Acer truncatum HOM05D005633 ORTHO05D007003 1.8e-50 203.4 168 63.7
Dinv17333 Davidia involucrata HOM05D005633 ORTHO05D007003 2.4e-50 203.0 136 79.4
Thhalv10007180m.g Eutrema salsugineum HOM05D005633 ORTHO05D007003 2.4e-50 203.0 220 54.5
Sc05g0007520 Simmondsia chinensis HOM05D005633 ORTHO05D007003 3.1e-50 202.6 165 64.2
AT1G28320 Arabidopsis thaliana HOM05D005633 ORTHO05D007003 4.1e-50 202.2 209 57.4
C05p27200 Brassica napus HOM05D005633 ORTHO05D007003 4.1e-50 202.2 210 57.6
BcaB07g32447 Brassica carinata HOM05D005633 ORTHO05D007003 5.3e-50 201.8 214 57.5
BolC5t31434H Brassica oleracea HOM05D005633 ORTHO05D007003 6.9e-50 201.4 211 56.9
Carub.0001s2677 Capsella rubella HOM05D005633 ORTHO05D007003 1.5e-49 200.3 172 63.4
Aqoxy1G02351 Aquilegia oxysepala HOM05D005633 ORTHO05D007003 2.0e-49 199.9 211 57.3
AUR62017045 Chenopodium quinoa HOM05D005633 ORTHO05D007003 2.6e-49 199.5 205 55.6
Thhalv10006942m.g Eutrema salsugineum HOM05D005633 ORTHO05D007003 3.4e-49 199.1 211 55.9
AL1G41900 Arabidopsis lyrata HOM05D005633 ORTHO05D007003 4.5e-49 198.7 209 56.0
Glyma.15G076300 Glycine max HOM05D005633 ORTHO05D007003 4.5e-49 198.7 156 68.6
PGR042G0490 Punica granatum HOM05D005633 ORTHO05D007003 1.0e-48 197.6 184 60.3
HanXRQChr01g0004651 Helianthus annuus HOM05D005633 ORTHO05D007003 1.7e-48 196.8 185 62.2
EL10Ac8g20419 Beta vulgaris HOM05D005633 ORTHO05D007003 1.1e-47 194.1 205 55.1
Aa31sc86G40 Aethionema arabicum HOM05D005633 ORTHO05D007003 2.5e-47 193.0 216 54.6
ECA248G0126 Erigeron canadensis HOM05D005633 ORTHO05D007003 9.4e-47 191.0 183 59.6
AUR62014850 Chenopodium quinoa HOM05D005633 ORTHO05D007003 1.2e-46 190.7 205 53.7
Lsat_1_v5_gn_1_124421 Lactuca sativa HOM05D005633 ORTHO05D007003 2.7e-46 189.5 204 55.9
ATR0752G234 Amborella trichopoda HOM05D005633 ORTHO05D007003 2.0e-44 183.3 184 58.7
Hund21211 Selenicereus undatus HOM05D005633 ORTHO05D007003 4.4e-44 182.2 228 47.4
Ah.14g089640 Amaranthus hybridus HOM05D005633 ORTHO05D007003 4.8e-43 178.7 185 54.1
SEGI_06204 Sequoiadendron giganteum HOM05D005633 ORTHO05D007003 1.4e-42 177.2 199 53.3
unitig_27.g24969 Utricularia gibba HOM05D005633 ORTHO05D007003 1.3e-40 170.6 188 48.9
Mapoly0045s0140 Marchantia polymorpha HOM05D005633 ORTHO05D007003 1.9e-39 166.8 192 55.2
HPP92_025316 Vanilla planifolia HOM05D005633 ORTHO05D007003 1.0e-37 161.0 179 54.7
AagrBONN_evm.TU.Sc2ySwM_228.2766 Anthoceros agrestis HOM05D005633 ORTHO05D007003 6.7e-37 158.3 207 49.8
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 5.3e-34 148.7 161 54.7
Pp3c24_9210 Physcomitrium patens HOM05D005633 ORTHO05D007003 1.2e-33 147.5 215 45.6
Os05g0497700 Oryza sativa ssp. japonica HOM05D005633 ORTHO05D007003 1.7e-32 143.7 166 51.2
SGA_v2.0_scaffold100G29699 Striga asiatica HOM05D005633 ORTHO05D007003 2.9e-32 142.9 205 45.4
Zm00001eb291760 Zea mays HOM05D005633 ORTHO05D007003 6.5e-32 141.7 180 47.2
MD05G1312100 Malus domestica HOM05D005633 ORTHO05D007003 6.5e-24 115.2 59 91.5
CBR_g49783 Chara braunii HOM05D005633 ORTHO05D001702 1.1e-23 114.4 170 44.7
MBI02_g35619_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 3.1e-18 96.3 180 40.0
MBI02_g35622_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 3.1e-18 96.3 182 41.8
Actinidia39471 Actinidia chinensis HOM05D005633 ORTHO05D007003 2.7e-17 93.2 117 51.3
Actinidia26133 Actinidia chinensis HOM05D005633 ORTHO05D007003 3.8e-16 89.4 110 50.0
Ciclev10014582m.g Citrus clementina HOM05D005633 ORTHO05D007003 4.2e-15 85.9 93 55.9
CDE05G1605 Ceratophyllum demersum HOM05D005633 ORTHO05D007003 9.5e-15 84.7 82 53.7
MCO12G111 Micromonas commoda HOM05D005633 ORTHO05D007003 3.7e-11 72.8 126 41.3
BolC3t19753H Brassica oleracea HOM05D005633 ORTHO05D007003 5.4e-10 68.9 43 65.1
Cre12.g548200 Chlamydomonas reinhardtii HOM05D005633 ORTHO05D007003 1.2e-09 67.8 61 45.9
A08p25680 Brassica napus HOM05D005633 ORTHO05D007003 2.9e-08 63.2 43 60.5


User provided reference genes

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