Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06298 Corylus avellana HOM05D003129 ORTHO05D004326 3.3e-84 315.1 168 100.0
Haze_06300 Corylus avellana HOM05D003129 ORTHO05D004326 5.7e-60 234.6 158 83.5
CiPaw.10G055300 Carya illinoinensis HOM05D003129 ORTHO05D004326 6.3e-59 231.1 145 85.5
CiPaw.09G066600 Carya illinoinensis HOM05D003129 ORTHO05D004326 5.9e-57 224.6 159 79.9
GSVIVG01021154001 Vitis vinifera HOM05D003129 ORTHO05D004326 3.8e-56 221.9 144 79.2
Manes.17G052000 Manihot esculenta HOM05D003129 ORTHO05D004326 3.2e-55 218.8 159 79.2
TAR624G0766 Trochodendron aralioides HOM05D003129 ORTHO05D004326 1.2e-54 216.9 159 74.8
RcHm_v2.0_Chr5g0009911 Rosa chinensis HOM05D003129 ORTHO05D004326 4.6e-54 214.9 145 82.1
TWI63G0550 Tripterygium wilfordii HOM05D003129 ORTHO05D004326 4.6e-54 214.9 142 78.9
Thecc.06G176900 Theobroma cacao HOM05D003129 ORTHO05D004326 6.1e-54 214.5 140 78.6
Ciclev10014801m.g Citrus clementina HOM05D003129 ORTHO05D004326 3.9e-53 211.8 146 76.0
Gohir.D10G029900 Gossypium hirsutum HOM05D003129 ORTHO05D004326 3.9e-53 211.8 140 76.4
CANSAT35G1487 Cannabis sativa HOM05D003129 ORTHO05D004326 5.1e-53 211.5 145 77.2
Gohir.A10G029400 Gossypium hirsutum HOM05D003129 ORTHO05D004326 6.7e-53 211.1 140 76.4
Gorai.011G031800 Gossypium raimondii HOM05D003129 ORTHO05D004326 6.7e-53 211.1 140 76.4
Potri.004G052300 Populus trichocarpa HOM05D003129 ORTHO05D004326 8.8e-53 210.7 143 77.6
Atru.chr10.1742 Acer truncatum HOM05D003129 ORTHO05D004326 1.5e-52 209.9 145 75.9
FAN16G1697 Fragaria x ananassa HOM05D003129 ORTHO05D004326 2.0e-52 209.5 146 80.8
Potri.011G062500 Populus trichocarpa HOM05D003129 ORTHO05D004326 3.3e-52 208.8 143 77.6
ClCG01G023490 Citrullus lanatus HOM05D003129 ORTHO05D004326 7.4e-52 207.6 143 75.5
Duzib192G0848 Durio zibethinus HOM05D003129 ORTHO05D004326 1.3e-51 206.8 140 77.1
FvH4_3g08240 Fragaria vesca HOM05D003129 ORTHO05D004326 1.3e-51 206.8 146 80.1
FAN11G2423 Fragaria x ananassa HOM05D003129 ORTHO05D004326 1.3e-51 206.8 146 80.1
MD05G1306200 Malus domestica HOM05D003129 ORTHO05D004326 1.3e-51 206.8 142 77.5
Prupe.4G056400 Prunus persica HOM05D003129 ORTHO05D004326 1.3e-51 206.8 140 79.3
MELO3C007237.2 Cucumis melo HOM05D003129 ORTHO05D004326 4.8e-51 204.9 146 74.0
CsaV3_6G050610 Cucumis sativus L. HOM05D003129 ORTHO05D004326 4.8e-51 204.9 146 74.0
PGR004G1912 Punica granatum HOM05D003129 ORTHO05D004326 6.3e-51 204.5 159 73.6
Eucgr.D00571 Eucalyptus grandis HOM05D003129 ORTHO05D004326 8.2e-51 204.1 140 76.4
FAN21G0899 Fragaria x ananassa HOM05D003129 ORTHO05D004326 8.2e-51 204.1 146 79.5
FAN25G1535 Fragaria x ananassa HOM05D003129 ORTHO05D004326 8.2e-51 204.1 146 79.5
MD10G1285200 Malus domestica HOM05D003129 ORTHO05D004326 4.1e-50 201.8 165 73.9
Sed0013050 Sechium edule HOM05D003129 ORTHO05D004326 4.1e-50 201.8 143 73.4
TWI38G0456 Tripterygium wilfordii HOM05D003129 ORTHO05D004326 6.9e-50 201.1 140 77.1
Sabra04G0033100 Salix brachista HOM05D003129 ORTHO05D004326 1.2e-49 200.3 131 80.2
Duzib235G0248 Durio zibethinus HOM05D003129 ORTHO05D004326 2.0e-49 199.5 140 72.9
THA.LOC104814245 Tarenaya hassleriana HOM05D003129 ORTHO05D004326 2.6e-49 199.1 144 71.5
Rhsim02G0138500 Rhododendron simsii HOM05D003129 ORTHO05D004326 4.5e-49 198.4 161 71.4
Hma1.2p1_0155F.1_g068510 Hydrangea macrophylla HOM05D003129 ORTHO05D004326 7.7e-49 197.6 143 72.7
Lalb_Chr05g0218661 Lupinus albus HOM05D003129 ORTHO05D004326 1.0e-48 197.2 142 72.5
Rhsim02G0138200 Rhododendron simsii HOM05D003129 ORTHO05D000043 1.0e-48 197.2 161 70.8
Nn1g04301 Nelumbo nucifera HOM05D003129 ORTHO05D004326 1.3e-48 196.8 159 73.6
Sabra11G0044300 Salix brachista HOM05D003129 ORTHO05D004326 1.7e-48 196.4 131 78.6
Cpa.g.sc7.28 Carica papaya HOM05D003129 ORTHO05D004326 5.0e-48 194.9 160 72.5
Sed0018741 Sechium edule HOM05D003129 ORTHO05D004326 1.9e-47 193.0 150 70.0
vmacro15954 Vaccinium macrocarpon HOM05D003129 ORTHO05D004326 1.9e-47 193.0 143 73.4
Oeu062329.1 Olea europaea HOM05D003129 ORTHO05D004326 2.5e-47 192.6 145 69.0
Glyma.07G203600 Glycine max HOM05D003129 ORTHO05D004326 3.2e-47 192.2 142 71.1
Aqoxy1G02212 Aquilegia oxysepala HOM05D003129 ORTHO05D004326 4.2e-47 191.8 143 71.3
Glyma.13G172200 Glycine max HOM05D003129 ORTHO05D004326 4.2e-47 191.8 142 71.1
Lalb_Chr09g0327941 Lupinus albus HOM05D003129 ORTHO05D004326 7.2e-47 191.0 142 69.7
COL.COLO4_31382 Corchorus olitorius HOM05D003129 ORTHO05D004326 9.4e-47 190.7 132 75.0
Eucgr.D00557 Eucalyptus grandis HOM05D003129 ORTHO05D004326 4.7e-46 188.3 128 77.3
Lj4g0011162 Lotus japonicus HOM05D003129 ORTHO05D004326 4.7e-46 188.3 141 70.2
Dinv14957 Davidia involucrata HOM05D003129 ORTHO05D004326 7.9e-46 187.6 142 68.3
TAR627G0274 Trochodendron aralioides HOM05D003129 ORTHO05D004326 5.1e-45 184.9 159 67.9
Gorai.010G242700 Gossypium raimondii HOM05D003129 ORTHO05D004326 6.7e-45 184.5 159 69.8
Haze_06313 Corylus avellana HOM05D003129 ORTHO05D004326 1.5e-44 183.3 131 75.6
Phvul.003G057200 Phaseolus vulgaris HOM05D003129 ORTHO05D004326 1.5e-44 183.3 145 69.7
Cc02_g14350 Coffea canephora HOM05D003129 ORTHO05D004326 2.6e-44 182.6 144 68.1
Gohir.D06G208800 Gossypium hirsutum HOM05D003129 ORTHO05D004326 7.4e-44 181.0 159 68.6
Ca_25382_v3 Cicer arietinum L. HOM05D003129 ORTHO05D004326 1.7e-43 179.9 139 68.3
DCAR_006587 Daucus carota HOM05D003129 ORTHO05D004326 1.7e-43 179.9 143 67.8
Gohir.A06G200950 Gossypium hirsutum HOM05D003129 ORTHO05D004326 1.7e-43 179.9 159 67.9
Gohir.A06G201000 Gossypium hirsutum HOM05D003129 ORTHO05D004326 1.7e-43 179.9 159 67.9
VMungo0251G0702 Vigna mungo HOM05D003129 ORTHO05D004326 2.2e-43 179.5 145 69.0
Lj2A294T71 Lonicera japonica HOM05D003129 ORTHO05D004326 2.8e-43 179.1 147 68.0
C03p22160 Brassica napus HOM05D003129 ORTHO05D004326 1.4e-42 176.8 145 65.5
BolC3t14601H Brassica oleracea HOM05D003129 ORTHO05D004326 1.4e-42 176.8 145 65.5
Psat7g118240 Pisum sativum HOM05D003129 ORTHO05D004326 1.4e-42 176.8 137 66.4
Solyc10g008800.4 Solanum lycopersicum HOM05D003129 ORTHO05D004326 1.4e-42 176.8 145 66.2
Sopen10g004580 Solanum pennellii HOM05D003129 ORTHO05D004326 1.4e-42 176.8 145 66.2
BcaC01g05811 Brassica carinata HOM05D003129 ORTHO05D004326 1.8e-42 176.4 145 65.5
Medtr4g087935 Medicago truncatula HOM05D003129 ORTHO05D004326 1.8e-42 176.4 136 66.9
TWI38G1536 Tripterygium wilfordii HOM05D003129 ORTHO05D004326 1.8e-42 176.4 140 66.4
GSVIVG01014247001 Vitis vinifera HOM05D003129 ORTHO05D004326 4.1e-42 175.3 137 67.9
Carub.0004s1567 Capsella rubella HOM05D003129 ORTHO05D004326 5.3e-42 174.9 149 64.4
BcaB01g03907 Brassica carinata HOM05D003129 ORTHO05D004326 9.1e-42 174.1 141 66.7
A03p19000 Brassica napus HOM05D003129 ORTHO05D004326 9.1e-42 174.1 145 64.8
BraA03t11158Z Brassica rapa HOM05D003129 ORTHO05D004326 9.1e-42 174.1 145 64.8
Hma1.2p1_0608F.1_g188220 Hydrangea macrophylla HOM05D003129 ORTHO05D004326 1.2e-41 173.7 143 67.8
TPR.G16267 Trifolium pratense HOM05D003129 ORTHO05D004326 1.6e-41 173.3 134 66.4
Thhalv10016466m.g Eutrema salsugineum HOM05D003129 ORTHO05D004326 2.0e-41 172.9 138 68.1
AT2G34040 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 2.6e-41 172.6 145 65.5
arahy.Tifrunner.gnm1.ann1.X0U75U Arachis hypogaea HOM05D003129 ORTHO05D004326 4.5e-41 171.8 138 66.7
Rhsim04G0023800 Rhododendron simsii HOM05D003129 ORTHO05D004326 7.7e-41 171.0 143 62.9
CAN.G361.6 Capsicum annuum HOM05D003129 ORTHO05D004326 1.3e-40 170.2 144 64.6
vmacro09507 Vaccinium macrocarpon HOM05D003129 ORTHO05D004326 1.7e-40 169.9 142 63.4
Nitab4.5_0002114g0030 Nicotiana tabacum HOM05D003129 ORTHO05D004326 2.2e-40 169.5 140 66.4
Sc05g0007260 Simmondsia chinensis HOM05D003129 ORTHO05D004326 2.2e-40 169.5 142 65.5
MSTRG.15833 Avicennia marina HOM05D003129 ORTHO05D004326 1.9e-39 166.4 138 66.7
DCAR_019584 Daucus carota HOM05D003129 ORTHO05D004326 4.2e-39 165.2 159 62.3
Aa31LG9G13850 Aethionema arabicum HOM05D003129 ORTHO05D004326 9.4e-39 164.1 151 59.6
CSS0050257 Camellia sinensis var. sinensis HOM05D003129 ORTHO05D004326 9.4e-39 164.1 144 61.1
Sp4g16390 Schrenkiella parvula HOM05D003129 ORTHO05D004326 9.4e-39 164.1 143 63.6
HanXRQChr11g0327221 Helianthus annuus HOM05D003129 ORTHO05D004326 1.6e-38 163.3 139 64.0
arahy.Tifrunner.gnm1.ann1.32PFVB Arachis hypogaea HOM05D003129 ORTHO05D004326 2.1e-38 162.9 143 61.5
SalBow7G0623 Salvia bowleyana HOM05D003129 ORTHO05D004326 2.7e-38 162.5 141 62.4
SalBow7G1178 Salvia bowleyana HOM05D003129 ORTHO05D004326 2.7e-38 162.5 141 62.4
Actinidia18785 Actinidia chinensis HOM05D003129 ORTHO05D004326 3.6e-38 162.2 160 58.1
CAN.G1119.14 Capsicum annuum HOM05D003129 ORTHO05D004326 4.7e-38 161.8 159 56.0
Cc05_g11500 Coffea canephora HOM05D003129 ORTHO05D004326 6.1e-38 161.4 159 57.2
Lsat_1_v5_gn_4_50661 Lactuca sativa HOM05D003129 ORTHO05D004326 8.0e-38 161.0 144 60.4
Solyc10g007150.4 Solanum lycopersicum HOM05D003129 ORTHO05D004326 8.0e-38 161.0 159 57.2
ECA234G1267 Erigeron canadensis HOM05D003129 ORTHO05D004326 1.4e-37 160.2 144 61.1
Sopen10g003050 Solanum pennellii HOM05D003129 ORTHO05D004326 1.8e-37 159.8 159 56.6
MSTRG.14212 Avicennia marina HOM05D003129 ORTHO05D004326 2.3e-37 159.5 160 60.0
Nn1g06337 Nelumbo nucifera HOM05D003129 ORTHO05D004326 2.3e-37 159.5 114 73.7
EL10Ac8g20476 Beta vulgaris HOM05D003129 ORTHO05D004326 3.0e-37 159.1 149 61.7
Peaxi162Scf00027g00106 Petunia axillaris HOM05D003129 ORTHO05D004326 3.0e-37 159.1 147 59.9
Actinidia35228 Actinidia chinensis HOM05D003129 ORTHO05D004326 5.2e-37 158.3 142 59.2
ATR0602G129 Amborella trichopoda HOM05D003129 ORTHO05D004326 1.5e-36 156.8 147 59.9
Thhalv10007287m.g Eutrema salsugineum HOM05D003129 ORTHO05D004326 2.0e-36 156.4 139 61.9
AUR62031128 Chenopodium quinoa HOM05D003129 ORTHO05D004326 3.3e-36 155.6 132 66.7
Ca_26044_v3 Cicer arietinum L. HOM05D003129 ORTHO05D004326 3.3e-36 155.6 121 68.6
MBI07_g06431_MAGBIO Magnolia biondii HOM05D003129 ORTHO05D000022 5.7e-36 154.8 147 59.9
Migut.H01970 Erythranthe guttata HOM05D003129 ORTHO05D004326 7.5e-36 154.5 148 60.8
HanXRQChr15g0481311 Helianthus annuus HOM05D003129 ORTHO05D004326 7.5e-36 154.5 140 60.7
CSS0027425 Camellia sinensis var. sinensis HOM05D003129 ORTHO05D004326 1.3e-35 153.7 144 58.3
Sp1g24960 Schrenkiella parvula HOM05D003129 ORTHO05D004326 1.7e-35 153.3 138 60.9
CARHR128120 Cardamine hirsuta HOM05D003129 ORTHO05D004326 2.8e-35 152.5 149 58.4
AUR62014921 Chenopodium quinoa HOM05D003129 ORTHO05D004326 2.8e-35 152.5 132 65.9
Oeu043093.1 Olea europaea HOM05D003129 ORTHO05D004326 2.8e-35 152.5 129 62.0
CARHR028240 Cardamine hirsuta HOM05D003129 ORTHO05D004326 6.3e-35 151.4 138 60.9
Lj1C835G5 Lonicera japonica HOM05D003129 ORTHO05D004326 6.3e-35 151.4 132 61.4
Ah.10g033800 Amaranthus hybridus HOM05D003129 ORTHO05D004326 1.1e-34 150.6 141 59.6
BolC4t23083H Brassica oleracea HOM05D003129 ORTHO05D004326 1.1e-34 150.6 153 56.2
AL1G42740 Arabidopsis lyrata HOM05D003129 ORTHO05D004326 1.4e-34 150.2 138 58.7
SGA_v2.0_scaffold130G34337 Striga asiatica HOM05D003129 ORTHO05D004326 1.8e-34 149.8 149 60.4
AT1G29030 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 4.1e-34 148.7 141 59.6
ECA236G4078 Erigeron canadensis HOM05D003129 ORTHO05D004326 5.3e-34 148.3 141 60.3
Carub.0001s2722 Capsella rubella HOM05D003129 ORTHO05D004326 1.2e-33 147.1 135 62.2
Dinv40631 Davidia involucrata HOM05D003129 ORTHO05D004326 1.2e-33 147.1 100 75.0
Nitab4.5_0001208g0080 Nicotiana tabacum HOM05D003129 ORTHO05D004326 1.2e-33 147.1 180 48.9
Nitab4.5_0000383g0360 Nicotiana tabacum HOM05D003129 ORTHO05D004326 1.6e-33 146.7 191 47.6
HPP92_002946 Vanilla planifolia HOM05D003129 ORTHO05D004326 1.6e-33 146.7 141 57.4
Hund21191 Selenicereus undatus HOM05D003129 ORTHO05D004326 3.5e-33 145.6 162 54.3
HanXRQChr04g0117191 Helianthus annuus HOM05D003129 ORTHO05D004326 4.5e-33 145.2 155 56.8
SalBow8G3208 Salvia bowleyana HOM05D003129 ORTHO05D004326 1.7e-32 143.3 143 58.7
A05p11620 Brassica napus HOM05D003129 ORTHO05D004326 3.8e-32 142.1 164 51.8
BraA05t20109Z Brassica rapa HOM05D003129 ORTHO05D004326 3.8e-32 142.1 164 51.8
AL4G29920 Arabidopsis lyrata HOM05D003129 ORTHO05D004326 6.5e-32 141.4 146 54.8
SGA_v2.0_scaffold70G23706 Striga asiatica HOM05D003129 ORTHO05D004326 8.5e-32 141.0 181 50.8
THA.LOC104812630 Tarenaya hassleriana HOM05D003129 ORTHO05D004326 1.1e-31 140.6 123 62.6
unitig_0.g2268 Utricularia gibba HOM05D003129 ORTHO05D004326 1.9e-31 139.8 158 53.8
unitig_52.g17399 Utricularia gibba HOM05D003129 ORTHO05D004326 2.5e-31 139.4 150 52.7
Haze_06317 Corylus avellana HOM05D003129 ORTHO05D004326 7.2e-31 137.9 120 70.0
unitig_699.g19233 Utricularia gibba HOM05D003129 ORTHO05D004326 7.2e-31 137.9 148 54.7
Aqoxy4G00539 Aquilegia oxysepala HOM05D003129 ORTHO05D004326 9.4e-31 137.5 144 53.5
Actinidia07677 Actinidia chinensis HOM05D003129 ORTHO05D004326 2.7e-30 136.0 104 70.2
Migut.M01074 Erythranthe guttata HOM05D003129 ORTHO05D004326 2.3e-29 132.9 87 75.9
PSO675G6268 Papaver somniferum HOM05D003129 ORTHO05D004326 4.0e-29 132.1 144 56.9
Os02g0313400 Oryza sativa ssp. japonica HOM05D003129 ORTHO05D004326 4.4e-28 128.6 136 52.9
PSO541G6176 Papaver somniferum HOM05D003129 ORTHO05D004326 9.8e-28 127.5 143 55.2
Cfa000558 Carpinus fangiana HOM05D003129 ORTHO05D004326 1.3e-27 127.1 158 57.6
CSS0027507 Camellia sinensis var. sinensis HOM05D003129 ORTHO05D004326 2.2e-27 126.3 89 73.0
Haze_06301 Corylus avellana HOM05D003129 ORTHO05D004326 3.1e-26 122.5 90 76.7
Zm00001eb203280 Zea mays HOM05D003129 ORTHO05D004326 4.1e-26 122.1 135 51.1
Mapoly0091s0056 Marchantia polymorpha HOM05D003129 ORTHO05D004326 1.6e-25 120.2 162 48.8
Zm00001eb235260 Zea mays HOM05D003129 ORTHO05D004326 2.9e-24 115.9 156 46.2
SHI34908 Sapria himalayana HOM05D003129 ORTHO05D004326 2.1e-22 109.8 87 62.1
Lsat_1_v5_gn_2_1061 Lactuca sativa HOM05D003129 ORTHO05D004326 1.0e-21 107.5 111 56.8
CDE02G2353 Ceratophyllum demersum HOM05D003129 ORTHO05D004326 6.8e-21 104.8 89 59.6
Sabra04G0033600 Salix brachista HOM05D003129 ORTHO05D004326 2.0e-20 103.2 61 85.2
BcaC05g26915 Brassica carinata HOM05D003129 ORTHO05D016405 2.8e-19 99.4 139 45.3
AagrBONN_evm.TU.Sc2ySwM_228.5751 Anthoceros agrestis HOM05D003129 ORTHO05D004326 4.9e-19 98.6 142 43.0
Peaxi162Scf00269g00314 Petunia axillaris HOM05D003129 ORTHO05D004326 2.4e-18 96.3 159 45.3
Pp3c3_22040 Physcomitrium patens HOM05D003129 ORTHO05D004326 1.0e-16 90.9 164 42.1
MBI06_g25719_MAGBIO Magnolia biondii HOM05D003129 ORTHO05D004326 1.7e-16 90.1 61 73.8
BolC5t31489H Brassica oleracea HOM05D003129 ORTHO05D016405 4.3e-15 85.5 127 44.1
Hma1.2p1_0660F.1_g197740 Hydrangea macrophylla HOM05D003129 ORTHO05D004326 9.5e-15 84.3 60 71.7
C04p15070 Brassica napus HOM05D003129 ORTHO05D004326 2.8e-14 82.8 153 39.2
MBI06_g25720_MAGBIO Magnolia biondii HOM05D003129 ORTHO05D004326 3.0e-13 79.3 147 45.6
SGA_v2.0_scaffold66G22240 Striga asiatica HOM05D003129 ORTHO05D004326 4.0e-13 79.0 53 75.5
CBR_g34638 Chara braunii HOM05D003129 ORTHO05D004326 2.6e-12 76.3 151 37.7
Haze_06304 Corylus avellana HOM05D003129 ORTHO05D004326 4.4e-12 75.5 38 100.0
AT3G19515 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 3.7e-11 72.4 96 43.8
GSVIVG01021158001 Vitis vinifera HOM05D003129 ORTHO05D004326 1.4e-10 70.5 40 80.0
RcHm_v2.0_Chr1g0362691 Rosa chinensis HOM05D003129 ORTHO05D004326 2.0e-09 66.6 117 41.9
SMO364G0322 Selaginella moellendorffii HOM05D003129 ORTHO05D004326 6.2e-06 55.1 159 33.3


User provided reference genes

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