Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06221 Corylus avellana HOM05D005676 ORTHO05D007375 2.2e-154 548.9 274 100.0
Haze_15661 Corylus avellana HOM05D005676 ORTHO05D007375 3.3e-65 252.7 144 86.8
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 2.4e-63 246.5 144 84.0
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 7.4e-25 118.6 148 47.3
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 9.7e-25 118.2 141 51.1
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 1.2e-22 111.3 122 51.6
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 2.0e-22 110.5 136 47.8
Gohir.D11G101600 Gossypium hirsutum HOM05D005676 ORTHO05D007375 3.4e-22 109.8 117 52.1
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 4.5e-22 109.4 117 52.1
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 2.9e-21 106.7 145 47.6
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 7.2e-20 102.1 140 46.4
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 1.2e-19 101.3 138 50.0
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 2.1e-19 100.5 137 45.3
Ciclev10023383m.g Citrus clementina HOM05D005676 ORTHO05D007375 2.7e-19 100.1 136 44.1
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 2.7e-19 100.1 135 49.6
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 4.6e-19 99.4 155 45.8
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 4.6e-19 99.4 155 45.2
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 7.9e-19 98.6 155 45.2
COL.COLO4_06282 Corchorus olitorius HOM05D005676 ORTHO05D007375 1.0e-18 98.2 136 46.3
Lj9A598G65 Lonicera japonica HOM05D005676 ORTHO05D007375 1.0e-18 98.2 144 43.8
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.4e-18 97.8 155 45.2
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 1.8e-18 97.4 179 40.2
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 2.3e-18 97.1 155 44.5
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 6.7e-18 95.5 155 43.9
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 2.8e-16 90.1 126 45.2
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 3.7e-16 89.7 139 46.0
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 4.8e-16 89.4 133 47.4
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 8.2e-16 88.6 138 45.7
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 1.4e-15 87.8 138 39.9
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 5.3e-15 85.9 139 43.2
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 9.1e-15 85.1 150 38.7
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 1.5e-14 84.3 139 43.2
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 1.5e-14 84.3 135 45.9
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 2.0e-14 84.0 139 42.4
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 4.5e-14 82.8 134 42.5
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 1.0e-13 81.6 126 44.4
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 1.3e-13 81.3 139 43.9
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 2.2e-13 80.5 142 41.5
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 3.8e-13 79.7 139 37.4
Peaxi162Scf00786g00018 Petunia axillaris HOM05D005676 ORTHO05D007375 6.5e-13 79.0 143 40.6
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 1.9e-12 77.4 129 41.1
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 1.9e-12 77.4 120 41.7
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 5.5e-12 75.9 140 37.9
Glyma.07G055366 Glycine max HOM05D005676 ORTHO05D007375 5.5e-12 75.9 131 42.0
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 7.2e-12 75.5 149 38.3
SalBow3G4648 Salvia bowleyana HOM05D005676 ORTHO05D007375 7.2e-12 75.5 148 37.2
MD07G1150300 Malus domestica HOM05D005676 ORTHO05D007375 9.4e-12 75.1 126 41.3
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 1.2e-11 74.7 148 37.8
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 2.1e-11 73.9 121 39.7
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 7.9e-11 72.0 143 38.5
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 1.0e-10 71.6 115 43.5
Cpa.g.sc96.24 Carica papaya HOM05D005676 ORTHO05D007375 2.3e-10 70.5 142 40.1
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 3.0e-10 70.1 139 36.7
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 6.7e-10 68.9 124 37.1
Migut.B01876 Erythranthe guttata HOM05D005676 ORTHO05D007375 6.7e-10 68.9 159 35.2
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 1.1e-09 68.2 142 37.3
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 2.0e-09 67.4 134 34.3
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 2.0e-09 67.4 138 37.7
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 5.7e-09 65.9 140 34.3
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 1.7e-08 64.3 124 36.3
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 2.8e-08 63.5 130 37.7
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 1.8e-07 60.8 137 35.0
Potri.014G099100 Populus trichocarpa HOM05D005676 ORTHO05D007375 2.4e-07 60.5 128 35.9
Sabra14G0072700 Salix brachista HOM05D005676 ORTHO05D007375 6.9e-07 58.9 119 38.7
FAN06G3424 Fragaria x ananassa HOM05D005676 ORTHO05D007375 9.1e-07 58.5 138 37.7
MBI06_g46582_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 9.1e-07 58.5 128 39.1
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 1.5e-06 57.8 134 36.6
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 2.6e-06 57.0 137 32.8
Thhalv10005757m.g Eutrema salsugineum HOM05D005676 ORTHO05D007375 7.7e-06 55.5 135 33.3


User provided reference genes

Program Settings