Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 2.4e-28 130.6 61 100.0
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 3.1e-15 87.0 49 81.6
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 1.2e-14 85.1 49 77.6
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 2.2e-13 80.9 59 62.7
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 5.0e-13 79.7 58 63.8
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 8.5e-13 79.0 58 63.8
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 8.5e-13 79.0 56 64.3
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 1.1e-12 78.6 59 61.0
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 1.1e-12 78.6 59 61.0
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 2.5e-12 77.4 58 60.3
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 4.2e-12 76.6 58 60.3
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 1.6e-11 74.7 47 70.2
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 1.6e-11 74.7 58 60.3
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 2.1e-11 74.3 56 60.7
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 2.7e-11 73.9 58 58.6
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 2.7e-11 73.9 56 60.7
Glyma.10G279850 Glycine max HOM05D006866 ORTHO05D008689 4.6e-11 73.2 45 73.3
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 4.6e-11 73.2 42 78.6
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 4.6e-11 73.2 42 78.6
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 4.6e-11 73.2 42 78.6
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 6.1e-11 72.8 42 78.6
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 7.9e-11 72.4 39 94.9
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 7.9e-11 72.4 41 75.6
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 1.0e-10 72.0 42 78.6
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 1.3e-10 71.6 42 78.6
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 1.3e-10 71.6 42 78.6
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 1.3e-10 71.6 42 78.6
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.8e-10 71.2 42 76.2
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 1.8e-10 71.2 41 75.6
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 2.3e-10 70.9 42 71.4
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 2.3e-10 70.9 42 76.2
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 2.3e-10 70.9 42 76.2
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.0e-10 70.5 40 75.0
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 3.0e-10 70.5 40 75.0
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 3.0e-10 70.5 41 80.5
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 3.0e-10 70.5 41 78.0
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 6.7e-10 69.3 40 75.0
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 6.7e-10 69.3 43 69.8
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.5e-09 68.2 42 73.8
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 1.9e-09 67.8 40 72.5
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 2.5e-09 67.4 42 71.4
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 2.5e-09 67.4 44 70.5
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 2.5e-09 67.4 39 76.9
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 3.3e-09 67.0 42 73.8
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 4.3e-09 66.6 42 69.0
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 9.7e-09 65.5 39 71.8
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 1.3e-08 65.1 38 81.6
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 1.7e-08 64.7 42 66.7
MD05G1251100 Malus domestica HOM05D006866 ORTHO05D008689 2.2e-08 64.3 42 71.4
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 2.8e-08 63.9 39 69.2
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 2.8e-08 63.9 39 69.2
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 3.7e-08 63.5 34 79.4
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 3.7e-08 63.5 39 69.2
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 6.3e-08 62.8 36 75.0
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 8.2e-08 62.4 42 64.3
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 8.2e-08 62.4 42 66.7
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 1.8e-07 61.2 39 64.1
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 5.3e-07 59.7 35 74.3
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 5.3e-07 59.7 42 59.5
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 6.9e-07 59.3 36 72.2
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 6.9e-07 59.3 38 65.8
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 6.9e-07 59.3 36 66.7
EL10Ac8g19311 Beta vulgaris HOM05D006866 ORTHO05D008689 9.1e-07 58.9 33 75.8
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 1.2e-06 58.5 37 83.8
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 2.0e-06 57.8 35 77.1
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 2.6e-06 57.4 36 69.4
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 2.6e-06 57.4 37 70.3
Lj5g0020884 Lotus japonicus HOM05D000132 ORTHO05D000058 2.6e-06 57.4 38 68.4
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 2.6e-06 57.4 36 69.4
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 2.6e-06 57.4 35 77.1
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 2.6e-06 57.4 34 70.6
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 2.6e-06 57.4 37 73.0
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 3.4e-06 57.0 36 69.4
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 3.4e-06 57.0 36 72.2


User provided reference genes

Program Settings