Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06041 Corylus avellana HOM05D026316 ORTHO05D029154 3.0e-111 406.4 468 100.0
Haze_06040 Corylus avellana HOM05D026316 ORTHO05D029154 3.7e-32 143.7 73 97.3
Nitab4.5_0000029g0140 Nicotiana tabacum HOM05D026316 ORTHO05D029154 4.2e-20 103.6 80 83.8
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 1.8e-18 98.2 69 91.3
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 9.7e-17 92.4 78 76.9
Glyma.18G252502 Glycine max HOM05D026316 ORTHO05D029154 1.2e-14 85.5 107 59.8
QL11p017794 Quercus lobata HOM05D001622 ORTHO05D002989 1.2e-11 75.5 40 82.5
Cfa000714 Carpinus fangiana HOM05D001622 ORTHO05D002989 1.6e-11 75.1 39 87.2
FAN16G2364 Fragaria x ananassa HOM05D001622 ORTHO05D002989 3.6e-11 73.9 40 82.5
FAN25G2269 Fragaria x ananassa HOM05D001622 ORTHO05D002989 3.6e-11 73.9 40 82.5
CiPaw.09G077800 Carya illinoinensis HOM05D001622 ORTHO05D002989 4.7e-11 73.6 40 80.0
FvH4_3g12240 Fragaria vesca HOM05D001622 ORTHO05D002989 4.7e-11 73.6 40 82.5
Prupe.4G111500 Prunus persica HOM05D001622 ORTHO05D002989 7.9e-11 72.8 56 62.5
COL.COLO4_30988 Corchorus olitorius HOM05D001622 ORTHO05D002989 2.3e-10 71.2 40 82.5
FAN21G0494 Fragaria x ananassa HOM05D001622 ORTHO05D002989 3.0e-10 70.9 40 80.0
GSVIVG01012074001 Vitis vinifera HOM05D001622 ORTHO05D002989 3.0e-10 70.9 40 80.0
CANSAT35G0696 Cannabis sativa HOM05D001622 ORTHO05D002989 6.7e-10 69.7 42 78.6
Dinv01069 Davidia involucrata HOM05D001622 ORTHO05D002989 1.1e-09 68.9 40 80.0
TAR626G1712 Trochodendron aralioides HOM05D001622 ORTHO05D002989 1.1e-09 68.9 40 77.5
CiPaw.10G064900 Carya illinoinensis HOM05D001622 ORTHO05D002989 2.0e-09 68.2 40 77.5
CDE07G1407 Ceratophyllum demersum HOM05D000186 ORTHO05D006806 2.0e-09 68.2 94 42.6
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.0e-09 68.2 107 53.3
Gohir.D06G144800 Gossypium hirsutum HOM05D001622 ORTHO05D002989 2.0e-09 68.2 40 77.5
Gorai.010G168600 Gossypium raimondii HOM05D001622 ORTHO05D002989 2.0e-09 68.2 40 77.5
Oeu050053.1 Olea europaea HOM05D001622 ORTHO05D002989 2.0e-09 68.2 52 63.5
Duzib192G0449 Durio zibethinus HOM05D001622 ORTHO05D002989 2.6e-09 67.8 40 80.0
Nn7g38155 Nelumbo nucifera HOM05D001622 ORTHO05D002989 2.6e-09 67.8 40 80.0
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 3.3e-09 67.4 58 58.6
Atru.chr10.508 Acer truncatum HOM05D001622 ORTHO05D002989 4.4e-09 67.0 40 72.5
Atru.chr10.523 Acer truncatum HOM05D001622 ORTHO05D002989 4.4e-09 67.0 40 72.5
Cpa.g.sc135.14 Carica papaya HOM05D001622 ORTHO05D002989 9.7e-09 65.9 40 75.0
Ciclev10014649m.g Citrus clementina HOM05D001622 ORTHO05D002989 2.2e-08 64.7 40 75.0
Gorai.009G151600 Gossypium raimondii HOM05D001622 ORTHO05D002989 2.2e-08 64.7 40 75.0
TWI63G0735 Tripterygium wilfordii HOM05D001622 ORTHO05D002989 2.2e-08 64.7 50 62.0
Potri.015G121400 Populus trichocarpa HOM05D001622 ORTHO05D002989 2.8e-08 64.3 40 75.0
Thecc.06G142000 Theobroma cacao HOM05D001622 ORTHO05D002989 2.8e-08 64.3 40 77.5
MELO3C007009.2 Cucumis melo HOM05D001622 ORTHO05D002989 3.7e-08 63.9 40 75.0
CsaV3_6G053000 Cucumis sativus L. HOM05D001622 ORTHO05D002989 3.7e-08 63.9 40 75.0
MD10G1233600 Malus domestica HOM05D001622 ORTHO05D002989 3.7e-08 63.9 42 78.6
RcHm_v2.0_Chr5g0020051 Rosa chinensis HOM05D001622 ORTHO05D002989 3.7e-08 63.9 41 75.6
CSS0005401 Camellia sinensis var. sinensis HOM05D001622 ORTHO05D002989 8.2e-08 62.8 38 76.3
CSS0033502 Camellia sinensis var. sinensis HOM05D001622 ORTHO05D002989 8.2e-08 62.8 38 76.3
Gohir.D05G147500 Gossypium hirsutum HOM05D001622 ORTHO05D002989 1.1e-07 62.4 40 72.5
Manes.16G057225 Manihot esculenta HOM05D001622 ORTHO05D002989 1.1e-07 62.4 40 75.0
vmacro03516 Vaccinium macrocarpon HOM05D001622 ORTHO05D002989 1.4e-07 62.0 38 73.7
CSS0035909 Camellia sinensis var. sinensis HOM05D001622 ORTHO05D002989 1.8e-07 61.6 40 72.5
ClCG01G025780 Citrullus lanatus HOM05D001622 ORTHO05D002989 1.8e-07 61.6 40 72.5
Cc00_g17380 Coffea canephora HOM05D001622 ORTHO05D002989 2.4e-07 61.2 40 72.5
TWI38G0544 Tripterygium wilfordii HOM05D001622 ORTHO05D002989 2.4e-07 61.2 40 72.5
TAR627G0876 Trochodendron aralioides HOM05D001622 ORTHO05D002989 2.4e-07 61.2 40 72.5
Ca_18765_v3 Cicer arietinum L. HOM05D001622 ORTHO05D002989 4.1e-07 60.5 41 75.6
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 4.1e-07 60.5 125 45.6
Lj2A351T24 Lonicera japonica HOM05D001622 ORTHO05D002989 5.3e-07 60.1 55 56.4
Sabra15G0137800 Salix brachista HOM05D001622 ORTHO05D002989 5.3e-07 60.1 40 70.0
Aqoxy1G01443 Aquilegia oxysepala HOM05D001622 ORTHO05D002989 7.0e-07 59.7 43 72.1
arahy.Tifrunner.gnm1.ann1.9MI9PY Arachis hypogaea HOM05D001622 ORTHO05D002989 9.1e-07 59.3 40 75.0
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 9.1e-07 59.3 107 51.4
DCAR_003783 Daucus carota HOM05D001622 ORTHO05D002989 1.2e-06 58.9 36 77.8
Nitab4.5_0001288g0080 Nicotiana tabacum HOM05D001622 ORTHO05D002989 1.2e-06 58.9 36 77.8
Nitab4.5_0008482g0010 Nicotiana tabacum HOM05D001622 ORTHO05D002989 1.2e-06 58.9 36 77.8
Potri.012G121700 Populus trichocarpa HOM05D001622 ORTHO05D002989 1.2e-06 58.9 45 66.7
TWI38G0188 Tripterygium wilfordii HOM05D001622 ORTHO05D002989 1.2e-06 58.9 40 72.5
MD05G1252600 Malus domestica HOM05D001622 ORTHO05D002989 2.6e-06 57.8 42 73.8
Sabra12G0092500 Salix brachista HOM05D001622 ORTHO05D002989 2.6e-06 57.8 43 67.4
Sabra12G0093200 Salix brachista HOM05D001622 ORTHO05D002989 2.6e-06 57.8 43 67.4
arahy.Tifrunner.gnm1.ann1.13DKAC Arachis hypogaea HOM05D001622 ORTHO05D002989 3.5e-06 57.4 40 72.5
Peaxi162Scf00149g00721 Petunia axillaris HOM05D001622 ORTHO05D002989 3.5e-06 57.4 36 75.0
Ciclev10019372m.g Citrus clementina HOM05D001622 ORTHO05D002989 4.5e-06 57.0 43 69.8
Eucgr.D01042 Eucalyptus grandis HOM05D001622 ORTHO05D002989 4.5e-06 57.0 40 70.0
Glyma.08G171900 Glycine max HOM05D001622 ORTHO05D002989 4.5e-06 57.0 43 72.1
Lj4g0011915 Lotus japonicus HOM05D001622 ORTHO05D002989 4.5e-06 57.0 44 68.2
Glyma.20G020400 Glycine max HOM05D001622 ORTHO05D002989 5.9e-06 56.6 43 65.1
Sabra12G0093500 Salix brachista HOM05D001622 ORTHO05D002989 5.9e-06 56.6 32 81.2
Thecc.07G152700 Theobroma cacao HOM05D001622 ORTHO05D002989 5.9e-06 56.6 46 65.2
Duzib213G0698 Durio zibethinus HOM05D001622 ORTHO05D002989 7.7e-06 56.2 40 67.5
Lalb_Chr16g0385241 Lupinus albus HOM05D001622 ORTHO05D002989 7.7e-06 56.2 42 71.4
TPR.G20982 Trifolium pratense HOM05D001622 ORTHO05D002989 7.7e-06 56.2 34 79.4


User provided reference genes

Program Settings