Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 2.1e-217 758.8 400 100.0
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 6.0e-217 757.3 400 99.8
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 1.4e-56 224.6 147 71.4
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 2.6e-55 220.3 141 70.2
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.6e-55 220.3 141 70.2
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 1.0e-54 218.4 150 68.0
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.7e-54 217.6 150 68.7
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 2.2e-54 217.2 145 75.9
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 5.0e-54 216.1 140 69.3
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 6.5e-54 215.7 143 69.2
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 8.5e-54 215.3 125 76.0
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 1.4e-53 214.5 141 70.9
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 5.5e-53 212.6 137 69.3
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 7.2e-53 212.2 136 69.9
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 4.6e-52 209.5 150 64.7
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 7.9e-52 208.8 136 68.4
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 1.4e-51 208.0 141 68.8
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 5.1e-51 206.1 135 67.4
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 5.1e-51 206.1 129 71.3
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 6.7e-51 205.7 128 70.3
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 1.5e-50 204.5 122 77.0
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.0e-50 204.1 125 74.4
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 2.0e-50 204.1 146 65.8
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.0e-50 204.1 135 67.4
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 2.4e-48 197.2 129 67.4
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 2.4e-48 197.2 142 64.1
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 4.1e-48 196.4 137 65.0
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.2e-47 194.9 140 62.1
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 2.0e-47 194.1 131 64.9
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 2.0e-47 194.1 147 64.6
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.0e-46 191.8 146 62.3
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 1.7e-46 191.0 125 67.2
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 1.7e-46 191.0 125 68.8
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 5.0e-46 189.5 124 71.0
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 1.4e-45 188.0 126 70.6
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 4.2e-45 186.4 139 59.7
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 7.2e-45 185.7 147 59.2
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.6e-44 184.5 147 58.5
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 2.1e-44 184.1 131 64.1
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 2.1e-44 184.1 147 59.9
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 2.7e-44 183.7 138 61.6
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 2.7e-44 183.7 146 58.2
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 3.6e-44 183.3 125 66.4
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 7.9e-44 182.2 141 59.6
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.4e-43 181.4 146 57.5
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 1.4e-43 181.4 138 63.0
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 1.8e-43 181.0 146 57.5
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 6.7e-43 179.1 139 59.7
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 8.8e-43 178.7 132 60.6
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 1.1e-42 178.3 141 58.2
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.1e-42 178.3 141 56.7
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 1.1e-42 178.3 138 59.4
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 2.0e-42 177.6 161 52.2
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 3.3e-42 176.8 141 58.9
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 4.4e-42 176.4 141 57.4
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 5.7e-42 176.0 137 61.3
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.7e-41 174.5 137 58.4
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 1.7e-41 174.5 137 59.9
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 2.2e-41 174.1 143 55.2
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 2.2e-41 174.1 143 55.2
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 2.2e-41 174.1 143 55.2
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 2.2e-41 174.1 141 56.0
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 2.8e-41 173.7 135 59.3
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 3.7e-41 173.3 148 53.4
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 6.3e-41 172.6 141 57.4
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 6.3e-41 172.6 124 61.3
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 8.2e-41 172.2 125 61.6
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 8.2e-41 172.2 148 52.7
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 8.2e-41 172.2 143 54.5
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.4e-40 171.4 143 54.5
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 1.4e-40 171.4 126 61.1
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 2.0e-39 167.5 137 58.4
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 2.0e-39 167.5 124 60.5
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 2.6e-39 167.2 144 55.6
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 2.6e-39 167.2 140 57.9
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 3.5e-39 166.8 140 57.9
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 4.5e-39 166.4 129 55.8
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 4.5e-39 166.4 129 55.8
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 5.9e-39 166.0 127 61.4
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 7.7e-39 165.6 140 55.0
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 1.0e-38 165.2 120 60.0
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.3e-38 164.9 147 52.4
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 2.2e-38 164.1 123 57.7
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 2.9e-38 163.7 137 56.9
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 4.2e-37 159.8 142 52.8
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 9.4e-37 158.7 148 52.7
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 2.1e-36 157.5 137 54.7
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 6.1e-36 156.0 124 54.0
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 1.8e-35 154.5 122 59.8
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 2.3e-35 154.1 130 57.7
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 4.0e-35 153.3 124 53.2
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.3e-33 148.3 130 56.9
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 2.2e-33 147.5 140 48.6
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 4.8e-33 146.4 93 72.0
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 1.8e-32 144.4 126 54.8
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 4.5e-31 139.8 156 46.2
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 2.2e-30 137.5 93 64.5
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 8.5e-30 135.6 132 50.0
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 6.1e-28 129.4 97 59.8
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 4.8e-25 119.8 127 46.5
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 8.3e-25 119.0 158 41.1
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 1.4e-24 118.2 198 33.3
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 2.4e-24 117.5 153 37.3
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 3.1e-24 117.1 118 43.2
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 1.2e-23 115.2 129 48.8
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 3.5e-23 113.6 82 59.8
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 7.7e-23 112.5 147 38.1
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 3.4e-18 97.1 82 56.1
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 9.8e-18 95.5 61 60.7
Cfa003473 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.3e-17 95.1 83 62.7
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.3e-17 95.1 51 86.3
Cfa014827 Carpinus fangiana HOM05D006750 ORTHO05D008426 1.6e-15 88.2 83 60.2
Cfa005130 Carpinus fangiana HOM05D000013 ORTHO05D000011 2.0e-15 87.8 83 57.8
Cfa001250 Carpinus fangiana HOM05D021975 ORTHO05D024899 5.6e-13 79.7 125 46.4
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 2.3e-11 74.3 95 36.8
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 2.6e-10 70.9 124 31.5
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 3.7e-09 67.0 46 60.9
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 4.9e-09 66.6 74 44.6
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 4.1e-08 63.5 118 36.4
Cfa001145 Carpinus fangiana HOM05D000011 ORTHO05D000157 3.5e-07 60.5 35 82.9
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 4.6e-07 60.1 71 43.7
Haze_22110 Corylus avellana HOM05D000635 ORTHO05D000488 6.6e-06 56.2 28 89.3
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 6.6e-06 56.2 135 27.4


User provided reference genes

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