Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05933 Corylus avellana HOM05D000329 ORTHO05D005330 2.0e-49 198.7 97 100.0
Haze_04433 Corylus avellana HOM05D000329 ORTHO05D005330 1.9e-39 165.6 83 97.6
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 4.2e-39 164.5 83 96.4
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 7.3e-36 153.7 83 90.4
QL03p030502 Quercus lobata HOM05D000329 ORTHO05D005330 1.5e-33 146.0 83 86.7
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 5.8e-33 144.1 83 84.3
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 4.9e-32 141.0 83 83.1
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 6.4e-32 140.6 83 83.1
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.4e-32 140.6 83 83.1
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.4e-32 140.6 83 83.1
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.4e-32 140.6 83 83.1
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 6.4e-32 140.6 83 83.1
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 2.4e-31 138.7 83 80.7
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 2.4e-31 138.7 83 80.7
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 4.2e-31 137.9 83 81.9
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 9.3e-31 136.7 83 80.7
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 9.3e-31 136.7 83 80.7
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 2.7e-30 135.2 83 83.1
Hma1.2p1_1512F.1_g287930 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 4.6e-30 134.4 83 77.1
Hma1.2p1_1512F.1_g287950 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 4.6e-30 134.4 83 77.1
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 1.0e-29 133.3 83 78.3
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 1.3e-29 132.9 89 74.2
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 1.8e-29 132.5 83 77.1
Sabra19G0028500 Salix brachista HOM05D000329 ORTHO05D000833 3.9e-29 131.3 83 78.3
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 3.9e-29 131.3 83 78.3
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 3.9e-29 131.3 83 79.5
arahy.Tifrunner.gnm1.ann1.I5XT77 Arachis hypogaea HOM05D000329 ORTHO05D005330 1.5e-28 129.4 84 76.2
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 1.5e-28 129.4 83 78.3
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 1.5e-28 129.4 83 78.3
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 3.3e-28 128.3 81 79.0
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 3.3e-28 128.3 83 77.1
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 3.3e-28 128.3 83 77.1
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 5.6e-28 127.5 82 76.8
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 5.6e-28 127.5 82 78.0
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 7.4e-28 127.1 83 75.9
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 7.4e-28 127.1 82 76.8
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.3e-27 126.3 83 78.3
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 1.6e-27 125.9 82 76.8
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 1.6e-27 125.9 83 74.7
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 2.1e-27 125.6 82 76.8
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 2.8e-27 125.2 82 76.8
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 2.8e-27 125.2 83 75.9
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 2.8e-27 125.2 82 75.6
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 2.8e-27 125.2 83 73.5
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 2.8e-27 125.2 83 73.5
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 4.8e-27 124.4 83 74.7
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 4.8e-27 124.4 83 74.7
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 4.8e-27 124.4 83 74.7
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 4.8e-27 124.4 83 75.9
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 4.8e-27 124.4 83 73.5
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 4.8e-27 124.4 83 77.1
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 6.2e-27 124.0 83 74.7
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 6.2e-27 124.0 83 72.3
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 8.1e-27 123.6 83 78.3
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 1.1e-26 123.2 82 74.4
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 1.1e-26 123.2 82 74.4
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 1.4e-26 122.9 83 72.3
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 1.4e-26 122.9 83 74.7
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 1.8e-26 122.5 82 74.4
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.8e-26 122.5 83 75.9
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 1.8e-26 122.5 83 73.5
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 2.4e-26 122.1 83 73.5
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 3.1e-26 121.7 83 75.9
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 3.1e-26 121.7 83 72.3
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 4.0e-26 121.3 83 73.5
SalBow6G5354 Salvia bowleyana HOM05D000329 ORTHO05D005330 4.0e-26 121.3 83 72.3
CAN.G155.4 Capsicum annuum HOM05D000329 ORTHO05D005330 5.3e-26 120.9 83 71.1
MBI10_g44932_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D005330 5.3e-26 120.9 83 71.1
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 5.3e-26 120.9 83 75.9
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 5.3e-26 120.9 83 74.7
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 9.0e-26 120.2 83 69.9
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 9.0e-26 120.2 83 69.9
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 1.2e-25 119.8 83 73.5
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 1.5e-25 119.4 83 71.1
Nitab4.5_0003285g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.0e-25 119.0 83 71.1
Nitab4.5_0000432g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.6e-25 118.6 83 71.1
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 3.4e-25 118.2 83 72.3
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 3.4e-25 118.2 83 73.5
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 4.5e-25 117.9 83 71.1
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 4.5e-25 117.9 83 71.1
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 4.5e-25 117.9 83 69.9
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 5.8e-25 117.5 83 71.1
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 7.6e-25 117.1 83 67.5
ClCG06G009520 Citrullus lanatus HOM05D000329 ORTHO05D005330 3.8e-24 114.8 85 69.4
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 8.4e-24 113.6 83 65.1
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 1.4e-23 112.8 83 66.3
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 3.2e-23 111.7 83 66.3
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 4.2e-23 111.3 83 65.1
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 5.5e-23 110.9 85 69.4
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 9.3e-23 110.2 83 71.1
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 9.3e-23 110.2 83 71.1
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 9.3e-23 110.2 83 71.1
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 1.2e-22 109.8 83 67.5
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 1.2e-22 109.8 85 68.2
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 1.2e-22 109.8 82 70.7
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 2.1e-22 109.0 83 65.1
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 1.0e-21 106.7 83 66.3
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 8.7e-21 103.6 83 61.4
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 2.8e-19 98.6 84 58.3
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 1.1e-18 96.7 108 50.0
HPP92_025571 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.1e-18 96.7 89 53.9
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.5e-17 92.8 83 56.6
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 1.5e-17 92.8 82 58.5
HPP92_025621 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.5e-17 92.8 84 53.6
HanXRQChr14g0434591 Helianthus annuus HOM05D000329 ORTHO05D005330 4.5e-17 91.3 74 64.9
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 7.6e-17 90.5 88 50.0
DCAR_000980 Daucus carota HOM05D000329 ORTHO05D005330 2.2e-16 89.0 90 57.8
SEGI_29711 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 2.9e-16 88.6 83 51.8
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 2.9e-16 88.6 87 51.7
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.8e-16 88.2 84 50.0
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.8e-16 88.2 84 50.0
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 3.5e-14 81.6 82 51.2
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 1.1e-12 76.6 93 44.1
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 2.0e-09 65.9 83 48.2
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 2.0e-09 65.9 83 48.2
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 1.0e-08 63.5 59 52.5


User provided reference genes

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