Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05889 Corylus avellana HOM05D003675 ORTHO05D004318 8.7e-188 660.2 349 100.0
Cfa000847 Carpinus fangiana HOM05D003675 ORTHO05D004318 8.2e-154 547.4 300 92.3
CiPaw.09G116500 Carya illinoinensis HOM05D003675 ORTHO05D004318 7.7e-152 540.8 300 91.0
QL05p053600 Quercus lobata HOM05D003675 ORTHO05D004318 7.9e-149 530.8 300 87.3
Haze_05761 Corylus avellana HOM05D003675 ORTHO05D004318 3.9e-148 528.5 347 80.4
PGR083G0730 Punica granatum HOM05D003675 ORTHO05D004318 1.1e-147 526.9 300 86.3
TAR627G0374 Trochodendron aralioides HOM05D003675 ORTHO05D004318 1.1e-147 526.9 300 86.0
Manes.06G060500 Manihot esculenta HOM05D003675 ORTHO05D004318 2.6e-147 525.8 326 81.0
Oeu015186.1 Olea europaea HOM05D003675 ORTHO05D004318 3.3e-147 525.4 300 85.7
Sed0018861 Sechium edule HOM05D003675 ORTHO05D004318 4.4e-147 525.0 298 87.6
CsaV3_1G037400 Cucumis sativus L. HOM05D003675 ORTHO05D004318 5.7e-147 524.6 298 87.2
Dinv15908 Davidia involucrata HOM05D003675 ORTHO05D004318 9.7e-147 523.9 300 85.3
MELO3C002803.2 Cucumis melo HOM05D003675 ORTHO05D004318 1.3e-146 523.5 298 86.9
ClCG03G006310 Citrullus lanatus HOM05D003675 ORTHO05D004318 1.7e-146 523.1 298 86.6
CANSAT35G1002 Cannabis sativa HOM05D003675 ORTHO05D004318 2.2e-146 522.7 300 86.0
Potri.011G090900 Populus trichocarpa HOM05D003675 ORTHO05D004318 2.2e-146 522.7 298 86.9
GSVIVG01021607001 Vitis vinifera HOM05D003675 ORTHO05D004318 3.7e-146 521.9 302 85.1
Actinidia07469 Actinidia chinensis HOM05D003675 ORTHO05D004318 8.2e-146 520.8 298 85.2
Potri.001G357600 Populus trichocarpa HOM05D003675 ORTHO05D004318 8.2e-146 520.8 298 86.6
Sed0017115 Sechium edule HOM05D003675 ORTHO05D004318 1.4e-145 520.0 298 86.2
Nn8g39842 Nelumbo nucifera HOM05D003675 ORTHO05D004318 1.8e-145 519.6 300 84.7
Sabra11G0086100 Salix brachista HOM05D003675 ORTHO05D004318 1.8e-145 519.6 298 85.9
Duzib248G0664 Durio zibethinus HOM05D003675 ORTHO05D004318 2.4e-145 519.2 300 85.0
Migut.H01338 Erythranthe guttata HOM05D003675 ORTHO05D004318 2.4e-145 519.2 298 84.9
TWI73G0281 Tripterygium wilfordii HOM05D003675 ORTHO05D004318 2.4e-145 519.2 300 84.3
Thecc.02G011900 Theobroma cacao HOM05D003675 ORTHO05D004318 3.1e-145 518.8 300 85.0
TWI53G0160 Tripterygium wilfordii HOM05D003675 ORTHO05D004318 3.1e-145 518.8 300 84.0
Aqoxy3G00253 Aquilegia oxysepala HOM05D003675 ORTHO05D004318 4.1e-145 518.5 298 86.2
COL.COLO4_17678 Corchorus olitorius HOM05D003675 ORTHO05D004318 5.3e-145 518.1 300 84.7
MD05G1275000 Malus domestica HOM05D003675 ORTHO05D004318 1.6e-144 516.5 300 84.7
SGA_v2.0_scaffold51G18648 Striga asiatica HOM05D003675 ORTHO05D004318 1.6e-144 516.5 326 78.5
PSO675G7364 Papaver somniferum HOM05D003675 ORTHO05D004318 2.0e-144 516.2 300 84.3
Peaxi162Scf00155g01015 Petunia axillaris HOM05D003675 ORTHO05D004318 2.0e-144 516.2 300 83.3
Zm00001eb347460 Zea mays HOM05D003675 ORTHO05D004318 2.0e-144 516.2 300 85.0
HanXRQChr08g0209981 Helianthus annuus HOM05D003675 ORTHO05D004318 2.6e-144 515.8 300 83.7
Manes.14G134400 Manihot esculenta HOM05D003675 ORTHO05D004318 2.6e-144 515.8 298 83.9
DCAR_003868 Daucus carota HOM05D003675 ORTHO05D004318 3.5e-144 515.4 298 84.6
CSS0048327 Camellia sinensis var. sinensis HOM05D003675 ORTHO05D004318 4.5e-144 515.0 300 84.7
Gohir.A12G045566 Gossypium hirsutum HOM05D003675 ORTHO05D004318 4.5e-144 515.0 300 84.3
Os08g0323700 Oryza sativa ssp. japonica HOM05D003675 ORTHO05D004318 4.5e-144 515.0 300 84.3
PSO675G2215 Papaver somniferum HOM05D003675 ORTHO05D004318 5.9e-144 514.6 300 84.0
Prupe.4G088900 Prunus persica HOM05D003675 ORTHO05D004318 5.9e-144 514.6 300 84.3
Zm00001eb286030 Zea mays HOM05D003675 ORTHO05D004318 5.9e-144 514.6 300 84.7
Cpa.g.sc17.78 Carica papaya HOM05D003675 ORTHO05D004318 1.0e-143 513.8 300 84.7
Gohir.D12G044700 Gossypium hirsutum HOM05D003675 ORTHO05D004318 1.3e-143 513.5 300 84.0
Gorai.008G047100 Gossypium raimondii HOM05D003675 ORTHO05D004318 1.3e-143 513.5 300 84.0
Sc24g0001490 Simmondsia chinensis HOM05D003675 ORTHO05D004318 1.3e-143 513.5 300 83.7
Duzib052G0595 Durio zibethinus HOM05D003675 ORTHO05D004318 1.7e-143 513.1 300 84.3
MD10G1254500 Malus domestica HOM05D003675 ORTHO05D004318 1.7e-143 513.1 300 84.0
Eucgr.D00196 Eucalyptus grandis HOM05D003675 ORTHO05D004318 2.9e-143 512.3 298 85.2
FvH4_3g09910 Fragaria vesca HOM05D003675 ORTHO05D004318 5.0e-143 511.5 300 83.0
FAN11G0336 Fragaria x ananassa HOM05D003675 ORTHO05D004318 5.0e-143 511.5 300 83.0
Atru.chr10.917 Acer truncatum HOM05D003675 ORTHO05D004318 6.5e-143 511.1 300 83.3
Atru.chr10.925 Acer truncatum HOM05D003675 ORTHO05D004318 6.5e-143 511.1 300 83.3
MBI18_g11285_MAGBIO Magnolia biondii HOM05D003675 ORTHO05D004318 6.5e-143 511.1 299 85.6
FAN21G3951 Fragaria x ananassa HOM05D003675 ORTHO05D004318 8.5e-143 510.8 300 82.7
Sopen02g019380 Solanum pennellii HOM05D003675 ORTHO05D004318 1.1e-142 510.4 326 77.0
Lsat_1_v5_gn_8_147381 Lactuca sativa HOM05D003675 ORTHO05D004318 1.5e-142 510.0 302 82.1
Solyc02g070290.3 Solanum lycopersicum HOM05D003675 ORTHO05D004318 1.5e-142 510.0 326 77.0
Cc09_g08810 Coffea canephora HOM05D003675 ORTHO05D004318 1.9e-142 509.6 305 82.3
ECA233G3702 Erigeron canadensis HOM05D003675 ORTHO05D004318 1.9e-142 509.6 300 82.7
FAN16G2870 Fragaria x ananassa HOM05D003675 ORTHO05D004318 1.9e-142 509.6 300 82.7
Lj6g0000180 Lotus japonicus HOM05D003675 ORTHO05D004318 1.9e-142 509.6 300 84.0
Sabra16G0235300 Salix brachista HOM05D003675 ORTHO05D004318 1.9e-142 509.6 321 79.4
Solyc02g021620.3 Solanum lycopersicum HOM05D003675 ORTHO05D004318 1.9e-142 509.6 300 82.0
Sopen02g006170 Solanum pennellii HOM05D003675 ORTHO05D004318 1.9e-142 509.6 300 82.0
PGSC0003DMG400021101 Solanum tuberosum HOM05D003675 ORTHO05D004318 1.9e-142 509.6 326 77.3
Aa31LG6G11710 Aethionema arabicum HOM05D003675 ORTHO05D004318 2.5e-142 509.2 298 82.6
CAN.G1058.33 Capsicum annuum HOM05D003675 ORTHO05D004318 2.5e-142 509.2 300 81.3
Medtr2g048510 Medicago truncatula HOM05D003675 ORTHO05D004318 4.2e-142 508.4 300 83.3
Psat1g019680 Pisum sativum HOM05D003675 ORTHO05D004318 4.2e-142 508.4 300 82.3
AT1G30450 Arabidopsis thaliana HOM05D003675 ORTHO05D004318 7.2e-142 507.7 298 82.9
CAN.G660.39 Capsicum annuum HOM05D003675 ORTHO05D004318 7.2e-142 507.7 298 83.2
ATR1098G088 Amborella trichopoda HOM05D003675 ORTHO05D004318 9.4e-142 507.3 298 83.6
Lj1C1164G14 Lonicera japonica HOM05D003675 ORTHO05D004318 9.4e-142 507.3 300 81.7
Ah.12g053620 Amaranthus hybridus HOM05D003675 ORTHO05D004318 1.2e-141 506.9 298 82.9
Sp1g26270 Schrenkiella parvula HOM05D003675 ORTHO05D004318 1.6e-141 506.5 298 82.9
AL1G44390 Arabidopsis lyrata HOM05D003675 ORTHO05D004318 2.1e-141 506.1 298 82.2
HPP92_017213 Vanilla planifolia HOM05D003675 ORTHO05D004318 2.1e-141 506.1 300 82.3
Aa31LG10G6660 Aethionema arabicum HOM05D003675 ORTHO05D004318 2.7e-141 505.8 298 82.9
Carub.0001s2862 Capsella rubella HOM05D003675 ORTHO05D004318 3.6e-141 505.4 298 82.2
RcHm_v2.0_Chr5g0015611 Rosa chinensis HOM05D003675 ORTHO05D004318 3.6e-141 505.4 300 82.3
Thhalv10006695m.g Eutrema salsugineum HOM05D003675 ORTHO05D004318 6.1e-141 504.6 298 82.6
Ciclev10014154m.g Citrus clementina HOM05D003675 ORTHO05D004318 8.0e-141 504.2 300 81.7
vmacro03400 Vaccinium macrocarpon HOM05D003675 ORTHO05D004318 1.0e-140 503.8 319 79.0
BcaNung05260 Brassica carinata HOM05D003675 ORTHO05D004318 2.3e-140 502.7 298 82.9
AUR62015052 Chenopodium quinoa HOM05D003675 ORTHO05D004318 2.3e-140 502.7 298 81.9
AUR62014439 Chenopodium quinoa HOM05D003675 ORTHO05D004318 4.0e-140 501.9 298 81.9
CARHR029820 Cardamine hirsuta HOM05D003675 ORTHO05D004318 5.2e-140 501.5 298 81.9
Glyma.15G193400 Glycine max HOM05D003675 ORTHO05D004318 5.2e-140 501.5 300 81.7
A08p24460 Brassica napus HOM05D003675 ORTHO05D004318 6.7e-140 501.1 298 82.6
BraA08t34402Z Brassica rapa HOM05D003675 ORTHO05D004318 6.7e-140 501.1 298 82.6
A07p09940 Brassica napus HOM05D003675 ORTHO05D004318 1.5e-139 500.0 298 81.9
BraA07t28783Z Brassica rapa HOM05D003675 ORTHO05D004318 1.5e-139 500.0 298 81.9
C07p15140 Brassica napus HOM05D003675 ORTHO05D004318 2.6e-139 499.2 298 81.5
BolC7t42018H Brassica oleracea HOM05D003675 ORTHO05D004318 2.6e-139 499.2 298 81.5
BcaC01g00192 Brassica carinata HOM05D003675 ORTHO05D004318 4.4e-139 498.4 298 81.9
C03p76760 Brassica napus HOM05D003675 ORTHO05D004318 4.4e-139 498.4 298 81.9
BolC3t19930H Brassica oleracea HOM05D003675 ORTHO05D004318 4.4e-139 498.4 298 81.9
Glyma.09G085300 Glycine max HOM05D003675 ORTHO05D004318 7.5e-139 497.7 300 81.3
HanXRQChr12g0385671 Helianthus annuus HOM05D003675 ORTHO05D004318 1.3e-138 496.9 300 80.0
Lalb_Chr08g0233231 Lupinus albus HOM05D003675 ORTHO05D004318 1.3e-138 496.9 300 81.3
Phvul.009G216800 Phaseolus vulgaris HOM05D003675 ORTHO05D004318 1.7e-138 496.5 300 80.0
Gorai.005G266600 Gossypium raimondii HOM05D003675 ORTHO05D004318 3.7e-138 495.4 300 81.3
Gohir.D02G238100 Gossypium hirsutum HOM05D003675 ORTHO05D004318 1.1e-137 493.8 300 81.0
Nn2g15671 Nelumbo nucifera HOM05D003675 ORTHO05D004318 1.4e-137 493.4 300 80.7
Lsat_1_v5_gn_4_241 Lactuca sativa HOM05D003675 ORTHO05D004318 7.0e-137 491.1 300 78.3
Lalb_Chr11g0073421 Lupinus albus HOM05D003675 ORTHO05D004318 1.6e-136 490.0 300 80.7
Rhsim13G0119800 Rhododendron simsii HOM05D003675 ORTHO05D004318 1.6e-136 490.0 344 73.5
DCAR_027870 Daucus carota HOM05D003675 ORTHO05D004318 3.5e-136 488.8 303 79.9
Zm00001eb197200 Zea mays HOM05D003675 ORTHO05D004318 7.7e-136 487.6 298 78.9
VMungo1309G0958 Vigna mungo HOM05D003675 ORTHO05D004318 2.9e-135 485.7 312 76.9
arahy.Tifrunner.gnm1.ann1.F8HCHG Arachis hypogaea HOM05D003675 ORTHO05D004318 4.7e-133 478.4 300 78.7
EL10Ac8g20233 Beta vulgaris HOM05D003675 ORTHO05D004318 6.8e-132 474.6 376 66.2
BcaB03g13830 Brassica carinata HOM05D003675 ORTHO05D004318 1.7e-130 469.9 284 81.3
TAR626G1758 Trochodendron aralioides HOM05D003675 ORTHO05D004318 1.1e-129 467.2 272 86.0
Ca_02515_v3 Cicer arietinum L. HOM05D003675 ORTHO05D004318 1.4e-129 466.8 300 77.7
CDE07G0962 Ceratophyllum demersum HOM05D003675 ORTHO05D004318 2.0e-128 463.0 267 85.8
Dinv32189 Davidia involucrata HOM05D003675 ORTHO05D004318 2.7e-128 462.6 300 77.3
Mapoly0050s0083 Marchantia polymorpha HOM05D003675 ORTHO05D004318 3.8e-127 458.8 300 72.7
Nitab4.5_0000869g0160 Nicotiana tabacum HOM05D003675 ORTHO05D004318 1.5e-126 456.8 306 76.1
Pp3c6_17940 Physcomitrium patens HOM05D003675 ORTHO05D004318 1.5e-126 456.8 302 71.9
Nitab4.5_0006732g0010 Nicotiana tabacum HOM05D003675 ORTHO05D004318 3.2e-126 455.7 273 82.1
SMO141G0147 Selaginella moellendorffii HOM05D003675 ORTHO05D004318 4.2e-126 455.3 300 72.3
SGA_v2.0_scaffold106G30664 Striga asiatica HOM05D003675 ORTHO05D004318 7.2e-126 454.5 298 75.5
Pp3c13_9730 Physcomitrium patens HOM05D003675 ORTHO05D004318 3.6e-125 452.2 304 73.7
Pp3c13_9737 Physcomitrium patens HOM05D003675 ORTHO05D004318 3.6e-125 452.2 304 73.7
Gohir.A03G216500 Gossypium hirsutum HOM05D003675 ORTHO05D004318 8.0e-125 451.1 300 76.0
arahy.Tifrunner.gnm1.ann1.119T42 Arachis hypogaea HOM05D003675 ORTHO05D004318 1.8e-124 449.9 300 75.7
vmacro23352 Vaccinium macrocarpon HOM05D003675 ORTHO05D004318 3.4e-123 445.7 295 76.9
AagrBONN_evm.TU.Sc2ySwM_344.2138 Anthoceros agrestis HOM05D003675 ORTHO05D004318 1.3e-122 443.7 298 72.1
Hund06713 Selenicereus undatus HOM05D003675 ORTHO05D004318 1.1e-121 440.7 332 69.3
Pp3c1_10530 Physcomitrium patens HOM05D003675 ORTHO05D004318 1.2e-120 437.2 298 71.5
SEGI_15305 Sequoiadendron giganteum HOM05D003675 ORTHO05D004318 1.6e-120 436.8 267 80.5
Pp3c2_27310 Physcomitrium patens HOM05D003675 ORTHO05D004318 3.3e-118 429.1 298 70.8
arahy.Tifrunner.gnm1.ann1.71J8LW Arachis hypogaea HOM05D003675 ORTHO05D004318 1.1e-113 414.1 300 71.0
Nitab4.5_0007290g0030 Nicotiana tabacum HOM05D003675 ORTHO05D004318 9.2e-113 411.0 249 83.5
Duzib132G0867 Durio zibethinus HOM05D003675 ORTHO05D004318 9.5e-110 401.0 300 68.3
Nitab4.5_0005814g0040 Nicotiana tabacum HOM05D003675 ORTHO05D004318 1.4e-105 387.1 300 66.3
RcHm_v2.0_Chr5g0015811 Rosa chinensis HOM05D003675 ORTHO05D004318 3.9e-103 379.0 217 83.9
CDE04G3079 Ceratophyllum demersum HOM05D003675 ORTHO05D004318 1.4e-100 370.5 218 83.0
CiPaw.10G086400 Carya illinoinensis HOM05D003675 ORTHO05D004318 4.4e-99 365.5 300 67.3
SHI20675 Sapria himalayana HOM05D003675 ORTHO05D000023 2.4e-97 359.8 226 79.6
Haze_06065 Corylus avellana HOM05D000100 ORTHO05D000052 1.4e-89 334.0 226 79.6
PRCOL_00004754 Prasinoderma coloniale HOM05D003675 ORTHO05D004318 3.2e-89 332.8 322 52.2
Psat3g081480 Pisum sativum HOM05D003675 ORTHO05D004318 5.4e-89 332.0 184 84.8
Haze_05681 Corylus avellana HOM05D003675 ORTHO05D004318 3.6e-85 319.3 246 72.0
Os01g0304100 Oryza sativa ssp. japonica HOM05D003675 ORTHO05D004318 7.1e-81 305.1 300 57.0
unitig_37.g12081 Utricularia gibba HOM05D003675 ORTHO05D004318 1.3e-79 300.8 282 60.6
Lj2A328G59 Lonicera japonica HOM05D003675 ORTHO05D004318 4.6e-72 275.8 300 51.7
Haze_27044 Corylus avellana HOM05D003675 ORTHO05D004318 1.2e-59 234.6 281 45.6
Haze_12671 Corylus avellana HOM05D003675 ORTHO05D004318 4.9e-58 229.2 147 83.7
Haze_12675 Corylus avellana HOM05D003675 ORTHO05D004318 4.9e-58 229.2 147 83.7
Haze_18108 Corylus avellana HOM05D001121 ORTHO05D001256 5.5e-57 225.7 223 61.0
HPP92_010709 Vanilla planifolia HOM05D003675 ORTHO05D004318 5.1e-55 219.2 166 68.7
CBR_g27771 Chara braunii HOM05D003675 ORTHO05D004318 6.7e-55 218.8 127 78.0
AagrBONN_evm.TU.Sc2ySwM_362.1613 Anthoceros agrestis HOM05D003675 ORTHO05D004318 2.7e-48 196.8 277 37.9
Nitab4.5_0000100g0150 Nicotiana tabacum HOM05D003675 ORTHO05D004318 1.0e-47 194.9 296 43.2
Mapoly0078s0036 Marchantia polymorpha HOM05D003675 ORTHO05D004318 3.3e-46 189.9 302 34.8
SMO304G0144 Selaginella moellendorffii HOM05D003675 ORTHO05D004318 4.3e-46 189.5 286 36.7
Pp3c1_28340 Physcomitrium patens HOM05D003675 ORTHO05D004318 9.7e-46 188.3 282 35.8
Pp3c14_11040 Physcomitrium patens HOM05D003675 ORTHO05D004318 2.8e-45 186.8 294 35.4
PRCOL_00002134 Prasinoderma coloniale HOM05D003675 ORTHO05D004318 1.1e-44 184.9 328 33.5
MCO15G428 Micromonas commoda HOM05D003675 ORTHO05D004318 5.3e-44 182.6 314 36.0
Pp3c17_10600 Physcomitrium patens HOM05D003675 ORTHO05D004318 9.1e-44 181.8 290 34.5
CDE04G1522 Ceratophyllum demersum HOM05D003675 ORTHO05D004318 6.3e-37 159.1 94 83.0
FAN25G0162 Fragaria x ananassa HOM05D003675 ORTHO05D004318 2.0e-35 154.1 82 87.8
HPP92_010716 Vanilla planifolia HOM05D003675 ORTHO05D004318 1.7e-34 151.0 300 36.0
AUR62034562 Chenopodium quinoa HOM05D003675 ORTHO05D004318 1.1e-33 148.3 87 81.6
Gohir.D02G239100 Gossypium hirsutum HOM05D003675 ORTHO05D004318 4.2e-33 146.4 80 86.2
CBR_g27773 Chara braunii HOM05D003675 ORTHO05D004318 2.2e-18 97.4 85 58.8
SHI20674 Sapria himalayana HOM05D000105 ORTHO05D000023 4.4e-14 83.2 125 47.2
arahy.Tifrunner.gnm1.ann1.DS3C7B Arachis hypogaea HOM05D003675 ORTHO05D004318 4.0e-07 60.1 27 85.2
Haze_00604 Corylus avellana HOM05D003675 ORTHO05D165237 9.8e-06 55.5 221 31.2


User provided reference genes

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