Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05823 Corylus avellana HOM05D005932 ORTHO05D006213 2.1e-57 226.1 176 100.0
Cfa000817 Carpinus fangiana HOM05D005932 ORTHO05D006213 1.9e-45 186.4 181 89.0
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.1e-24 117.5 177 51.4
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 3.6e-17 92.4 129 46.5
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 8.1e-17 91.3 138 55.8
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.4e-16 90.5 163 48.5
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 6.9e-16 88.2 128 52.3
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 3.4e-15 85.9 143 43.4
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 2.2e-14 83.2 138 38.4
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 2.9e-14 82.8 137 46.0
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 6.4e-14 81.6 134 46.3
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 8.4e-14 81.3 129 47.3
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.1e-13 80.9 165 38.8
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 1.1e-13 80.9 139 51.8
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.4e-13 80.5 134 45.5
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.4e-13 80.5 134 45.5
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.9e-13 80.1 129 44.2
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 2.4e-13 79.7 130 51.5
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 4.2e-13 79.0 136 40.4
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 7.1e-13 78.2 131 46.6
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 1.2e-12 77.4 126 42.9
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.1e-12 76.6 135 45.9
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 2.1e-12 76.6 167 36.5
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 2.1e-12 76.6 165 35.8
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 7.9e-12 74.7 138 39.9
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 3.0e-11 72.8 168 33.3
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.9e-11 72.4 139 39.6
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 6.7e-11 71.6 139 38.8
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.5e-10 70.5 132 36.4
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.9e-10 70.1 139 38.1
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 2.5e-10 69.7 119 39.5
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 2.5e-10 69.7 119 39.5
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 2.5e-10 69.7 119 39.5
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 3.3e-10 69.3 166 35.5
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 4.3e-10 68.9 134 34.3
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 4.3e-10 68.9 135 41.5
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 4.3e-10 68.9 132 35.6
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 5.6e-10 68.6 140 37.1
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 7.4e-10 68.2 166 33.1
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 1.3e-09 67.4 167 31.7
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.6e-09 67.0 123 38.2
QL05p061901 Quercus lobata HOM05D005932 ORTHO05D006213 2.1e-09 66.6 185 52.4
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 2.8e-09 66.2 122 39.3
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 2.8e-09 66.2 133 36.8
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 3.7e-09 65.9 119 38.7
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 4.8e-09 65.5 119 39.5
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 6.2e-09 65.1 129 38.0
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 8.1e-09 64.7 134 32.1
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 8.1e-09 64.7 164 29.9
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 8.1e-09 64.7 133 41.4
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 1.1e-08 64.3 127 45.7
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 1.4e-08 63.9 119 37.0
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 1.4e-08 63.9 133 33.8
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 1.8e-08 63.5 121 44.6
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 3.1e-08 62.8 136 33.8
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 3.1e-08 62.8 143 38.5
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 6.9e-08 61.6 119 37.8
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 6.9e-08 61.6 136 35.3
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 2.6e-07 59.7 132 34.8
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 3.4e-07 59.3 134 35.1
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 4.5e-07 58.9 132 34.8
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 4.5e-07 58.9 141 30.5
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 4.5e-07 58.9 134 38.1
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 4.5e-07 58.9 132 35.6
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 7.6e-07 58.2 128 34.4
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.7e-06 57.0 125 31.2
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 1.7e-06 57.0 140 31.4
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 1.7e-06 57.0 138 34.8
Eucgr.E02504 Eucalyptus grandis HOM05D005932 ORTHO05D006213 3.8e-06 55.8 134 53.0
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.8e-06 55.8 129 30.2
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 6.4e-06 55.1 134 32.1
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 6.4e-06 55.1 131 30.5
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 6.4e-06 55.1 117 35.9
FAN16G0402 Fragaria x ananassa HOM05D005932 ORTHO05D006213 8.4e-06 54.7 138 35.5


User provided reference genes

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