Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 6.6e-99 364.0 180 100.0
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 4.7e-36 155.2 91 90.1
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 1.4e-35 153.7 95 84.2
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.8e-35 153.3 93 84.9
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.2e-34 150.6 93 84.9
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 1.5e-34 150.2 93 83.9
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 3.4e-34 149.1 90 85.6
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 1.7e-33 146.7 93 81.7
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 2.2e-33 146.4 93 84.9
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 8.3e-33 144.4 93 80.6
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 8.3e-33 144.4 93 77.4
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 8.3e-33 144.4 93 81.7
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 8.3e-33 144.4 93 80.6
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 1.1e-32 144.1 93 79.6
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 1.4e-32 143.7 93 76.3
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 1.8e-32 143.3 93 79.6
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 3.1e-32 142.5 93 76.3
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 3.1e-32 142.5 93 78.5
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 9.1e-32 141.0 92 79.3
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 1.2e-31 140.6 93 77.4
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 1.2e-31 140.6 93 77.4
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 2.7e-31 139.4 104 75.0
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 2.7e-31 139.4 93 77.4
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 3.5e-31 139.0 94 76.6
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 4.5e-31 138.7 93 76.3
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 7.7e-31 137.9 93 76.3
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 1.0e-30 137.5 93 76.3
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 1.7e-30 136.7 93 77.4
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 3.8e-30 135.6 93 75.3
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 3.8e-30 135.6 92 75.0
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 5.0e-30 135.2 95 76.8
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 5.0e-30 135.2 95 76.8
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 6.5e-30 134.8 93 76.3
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 8.6e-30 134.4 93 74.2
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.5e-29 133.7 101 72.3
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 1.9e-29 133.3 89 76.4
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.9e-29 133.3 93 76.3
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 2.5e-29 132.9 93 74.2
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.5e-29 132.9 92 76.1
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 3.2e-29 132.5 92 76.1
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 7.2e-29 131.3 90 76.7
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 9.5e-29 131.0 90 76.7
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 9.5e-29 131.0 93 71.0
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 9.5e-29 131.0 93 72.0
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.2e-28 130.6 90 73.3
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 2.1e-28 129.8 92 71.7
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.1e-28 129.8 92 73.9
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 2.8e-28 129.4 92 71.7
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 2.8e-28 129.4 93 71.0
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 4.7e-28 128.6 89 74.2
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 6.1e-28 128.3 91 70.3
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 2.3e-27 126.3 95 65.3
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 2.3e-27 126.3 95 65.3
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 3.0e-27 125.9 95 67.4
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 5.2e-27 125.2 89 74.2
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 2.0e-26 123.2 93 66.7
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 2.6e-26 122.9 93 66.7
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 2.6e-26 122.9 93 66.7
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 2.6e-26 122.9 89 74.2
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 4.4e-26 122.1 93 65.6
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 5.7e-26 121.7 89 74.2
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 5.7e-26 121.7 93 68.8
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 7.5e-26 121.3 92 64.1
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 7.5e-26 121.3 90 64.4
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 9.8e-26 120.9 93 64.5
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 1.7e-25 120.2 93 65.6
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 2.2e-25 119.8 93 65.6
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.2e-25 119.8 95 63.2
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 2.2e-25 119.8 92 67.4
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 2.8e-25 119.4 92 66.3
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 2.8e-25 119.4 91 63.7
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 2.8e-25 119.4 91 64.8
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 3.7e-25 119.0 93 69.9
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 4.9e-25 118.6 91 62.6
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 6.3e-25 118.2 88 68.2
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 8.3e-25 117.9 92 68.5
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 8.3e-25 117.9 86 68.6
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.1e-24 117.5 88 64.8
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 1.4e-24 117.1 88 67.0
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 1.4e-24 117.1 88 65.9
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 2.4e-24 116.3 93 64.5
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 2.4e-24 116.3 93 64.5
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 5.4e-24 115.2 88 65.9
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 5.4e-24 115.2 93 59.1
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 7.0e-24 114.8 88 62.5
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 9.2e-24 114.4 93 61.3
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.6e-23 113.6 88 63.6
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 1.6e-23 113.6 88 63.6
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 1.6e-23 113.6 92 58.7
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 2.7e-23 112.8 88 63.6
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 2.7e-23 112.8 88 63.6
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 2.7e-23 112.8 88 63.6
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 1.3e-22 110.5 91 58.2
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 2.3e-22 109.8 89 61.8
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 3.8e-22 109.0 88 61.4
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 5.0e-22 108.6 86 62.8
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 1.9e-21 106.7 70 72.9
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 4.3e-21 105.5 90 58.9
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.8e-20 102.8 83 61.4
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 1.0e-19 100.9 92 56.5
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 5.2e-19 98.6 93 55.9
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.2e-18 97.4 73 64.4
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.6e-18 96.3 102 52.0
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 2.4e-16 89.7 49 79.6
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 1.0e-14 84.3 94 44.7
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 1.5e-13 80.5 144 35.4
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.9e-13 80.1 49 73.5
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 9.5e-13 77.8 95 43.2
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 4.7e-12 75.5 76 47.4
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 2.3e-11 73.2 49 65.3
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 7.5e-10 68.2 66 51.5
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 3.7e-09 65.9 49 57.1
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 2.3e-06 56.6 39 71.8


User provided reference genes

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