Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05790 Corylus avellana HOM05D008919 ORTHO05D011156 2.0e-92 342.4 175 100.0
Haze_05797 Corylus avellana HOM05D008919 ORTHO05D011156 2.0e-92 342.4 175 100.0
Haze_05792 Corylus avellana HOM05D008919 ORTHO05D011156 4.8e-78 294.7 177 85.3
Haze_05799 Corylus avellana HOM05D008919 ORTHO05D011156 4.8e-78 294.7 177 85.3
Haze_05791 Corylus avellana HOM05D008919 ORTHO05D011156 2.2e-75 285.8 175 82.3
Haze_05798 Corylus avellana HOM05D008919 ORTHO05D011156 2.2e-75 285.8 175 82.3
Haze_05787 Corylus avellana HOM05D008919 ORTHO05D011156 3.3e-63 245.4 176 72.2
Haze_05794 Corylus avellana HOM05D008919 ORTHO05D011156 3.3e-63 245.4 176 72.2
Haze_05789 Corylus avellana HOM05D008919 ORTHO05D011156 6.5e-59 231.1 175 67.4
Haze_05796 Corylus avellana HOM05D008919 ORTHO05D011156 6.5e-59 231.1 175 67.4
Haze_05788 Corylus avellana HOM05D008919 ORTHO05D011156 5.4e-45 184.9 175 54.3
Haze_05795 Corylus avellana HOM05D008919 ORTHO05D011156 1.2e-44 183.7 175 53.7
Haze_05784 Corylus avellana HOM05D008919 ORTHO05D011156 2.0e-39 166.4 143 56.6
QL05p021955 Quercus lobata HOM05D008919 ORTHO05D011156 2.2e-38 162.9 175 49.7
Haze_05781 Corylus avellana HOM05D008919 ORTHO05D011156 3.7e-38 162.2 152 53.3
Haze_15055 Corylus avellana HOM05D008919 ORTHO05D011156 1.6e-36 156.8 149 53.7
CiPaw.01G236600 Carya illinoinensis HOM05D008919 ORTHO05D011156 3.5e-36 155.6 187 47.1
QL05p021854 Quercus lobata HOM05D008919 ORTHO05D011156 1.1e-34 150.6 162 52.5
QL05p022002 Quercus lobata HOM05D008919 ORTHO05D011156 1.5e-34 150.2 180 48.3
Haze_05783 Corylus avellana HOM05D008919 ORTHO05D011156 1.2e-33 147.1 128 53.9
QL05p021878 Quercus lobata HOM05D008919 ORTHO05D011156 2.3e-32 142.9 168 45.2
QL05p021916 Quercus lobata HOM05D008919 ORTHO05D011156 3.4e-31 139.0 176 46.6
Gohir.A11G281500 Gossypium hirsutum HOM05D008919 ORTHO05D011156 1.5e-26 123.6 152 46.1
Gohir.D11G294100 Gossypium hirsutum HOM05D008919 ORTHO05D011156 3.3e-26 122.5 170 42.9
Gorai.007G317100 Gossypium raimondii HOM05D008919 ORTHO05D011156 7.3e-26 121.3 170 42.9
Thecc.07G059400 Theobroma cacao HOM05D008919 ORTHO05D011156 9.5e-26 120.9 167 42.5
Gohir.A11G281400 Gossypium hirsutum HOM05D008919 ORTHO05D011156 3.6e-25 119.0 151 45.7
Thecc.07G059500 Theobroma cacao HOM05D008919 ORTHO05D011156 4.7e-25 118.6 177 40.7
Gorai.007G317000 Gossypium raimondii HOM05D008919 ORTHO05D011156 1.1e-24 117.5 151 45.0
Gohir.D11G294000 Gossypium hirsutum HOM05D008919 ORTHO05D011156 5.2e-24 115.2 151 44.4
COL.COLO4_29350 Corchorus olitorius HOM05D008919 ORTHO05D011156 5.8e-23 111.7 174 40.2
COL.COLO4_24127 Corchorus olitorius HOM05D008919 ORTHO05D011156 3.7e-22 109.0 166 36.1
COL.COLO4_09537 Corchorus olitorius HOM05D008919 ORTHO05D011156 4.9e-22 108.6 165 39.4
Dinv04209 Davidia involucrata HOM05D008919 ORTHO05D011156 5.4e-21 105.1 178 37.6
COL.COLO4_09538 Corchorus olitorius HOM05D008919 ORTHO05D011156 7.8e-20 101.3 164 37.2
TWI74G1670 Tripterygium wilfordii HOM05D008919 ORTHO05D011156 2.0e-15 86.7 166 33.7
COL.COLO4_33188 Corchorus olitorius HOM05D008919 ORTHO05D011156 2.1e-12 76.6 164 32.9
Atru.chr12.240 Acer truncatum HOM05D058667 ORTHO05D023190 3.3e-10 69.3 165 29.1
TAR365G0500 Trochodendron aralioides HOM05D001578 ORTHO05D001207 9.6e-10 67.8 135 33.3
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 9.6e-10 67.8 155 30.3
MBI09_g40718_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 4.7e-09 65.5 170 30.0
TAR365G1026 Trochodendron aralioides HOM05D001578 ORTHO05D001207 6.2e-09 65.1 155 31.0
Ciclev10003542m.g Citrus clementina HOM05D001578 ORTHO05D001207 1.8e-08 63.5 158 30.4
COL.COLO4_03371 Corchorus olitorius HOM05D021494 ORTHO05D022415 1.8e-08 63.5 151 26.5
MBI09_g01820_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 1.8e-08 63.5 170 29.4
Gohir.D01G023568 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.4e-08 63.2 168 28.0
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 2.4e-08 63.2 171 28.1
COL.COLO4_17218 Corchorus olitorius HOM05D021494 ORTHO05D022415 5.2e-08 62.0 122 28.7
DCAR_028534 Daucus carota HOM05D004113 ORTHO05D005233 5.2e-08 62.0 177 29.9
Gorai.002G031200 Gossypium raimondii HOM05D001578 ORTHO05D001207 5.2e-08 62.0 168 28.0
Cpa.g.sc9.24 Carica papaya HOM05D001578 ORTHO05D001207 8.9e-08 61.2 154 29.2
Duzib052G0880 Durio zibethinus HOM05D001578 ORTHO05D001207 8.9e-08 61.2 125 28.8
Hma1.2p1_0078F.1_g039850 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 8.9e-08 61.2 156 29.5
Hma1.2p1_1400F.1_g280915 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 8.9e-08 61.2 156 29.5
Cfa006332 Carpinus fangiana HOM05D001578 ORTHO05D001207 1.2e-07 60.8 107 36.4
PGR004G2339 Punica granatum HOM05D001578 ORTHO05D001207 2.0e-07 60.1 168 25.0
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 4.4e-07 58.9 142 28.2
MBI09_g02146_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 4.4e-07 58.9 159 29.6
TAR628G0877 Trochodendron aralioides HOM05D004113 ORTHO05D005233 7.6e-07 58.2 161 33.5
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 9.9e-07 57.8 166 25.9
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 9.9e-07 57.8 166 25.9
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 9.9e-07 57.8 168 26.2
CANSAT78G0727 Cannabis sativa HOM05D001578 ORTHO05D001207 2.2e-06 56.6 179 28.5
COL.COLO4_13277 Corchorus olitorius HOM05D036180 ORTHO05D023190 2.2e-06 56.6 167 23.4
Gohir.A01G035300 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.2e-06 56.6 120 30.0
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 2.9e-06 56.2 173 26.6
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 2.9e-06 56.2 129 30.2
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 4.9e-06 55.5 130 30.0
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 4.9e-06 55.5 169 24.9
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 4.9e-06 55.5 169 24.9
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 8.4e-06 54.7 168 24.4
MBI13_g01661_MAGBIO Magnolia biondii HOM05D000036 ORTHO05D002265 8.4e-06 54.7 145 27.6
Manes.10G035700 Manihot esculenta HOM05D004113 ORTHO05D005233 8.4e-06 54.7 155 25.8
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 8.4e-06 54.7 124 29.8


User provided reference genes

Program Settings