Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05787 Corylus avellana HOM05D008919 ORTHO05D011156 5.9e-92 340.9 176 100.0
Haze_05794 Corylus avellana HOM05D008919 ORTHO05D011156 5.9e-92 340.9 176 100.0
Haze_05792 Corylus avellana HOM05D008919 ORTHO05D011156 1.2e-68 263.5 171 78.9
Haze_05799 Corylus avellana HOM05D008919 ORTHO05D011156 1.2e-68 263.5 171 78.9
Haze_05791 Corylus avellana HOM05D008919 ORTHO05D011156 8.6e-67 257.3 176 75.6
Haze_05798 Corylus avellana HOM05D008919 ORTHO05D011156 8.6e-67 257.3 176 75.6
Haze_05790 Corylus avellana HOM05D008919 ORTHO05D011156 4.4e-63 245.0 176 72.2
Haze_05797 Corylus avellana HOM05D008919 ORTHO05D011156 4.4e-63 245.0 176 72.2
Haze_05788 Corylus avellana HOM05D008919 ORTHO05D011156 3.2e-53 212.2 176 64.8
Haze_05795 Corylus avellana HOM05D008919 ORTHO05D011156 7.0e-53 211.1 176 64.2
Haze_05789 Corylus avellana HOM05D008919 ORTHO05D011156 1.8e-48 196.4 176 58.5
Haze_05796 Corylus avellana HOM05D008919 ORTHO05D011156 1.8e-48 196.4 176 58.5
Haze_05784 Corylus avellana HOM05D008919 ORTHO05D011156 8.9e-48 194.1 143 67.8
Haze_05781 Corylus avellana HOM05D008919 ORTHO05D011156 3.7e-46 188.7 156 64.1
Haze_05783 Corylus avellana HOM05D008919 ORTHO05D011156 9.5e-42 174.1 128 65.6
QL05p021955 Quercus lobata HOM05D008919 ORTHO05D011156 9.5e-42 174.1 165 52.1
QL05p021878 Quercus lobata HOM05D008919 ORTHO05D011156 4.0e-40 168.7 175 52.6
QL05p021854 Quercus lobata HOM05D008919 ORTHO05D011156 8.3e-38 161.0 179 51.4
CiPaw.01G236600 Carya illinoinensis HOM05D008919 ORTHO05D011156 6.0e-36 154.8 179 49.2
Haze_15055 Corylus avellana HOM05D008919 ORTHO05D011156 2.3e-35 152.9 161 53.4
QL05p022002 Quercus lobata HOM05D008919 ORTHO05D011156 1.9e-34 149.8 172 48.8
QL05p021916 Quercus lobata HOM05D008919 ORTHO05D011156 4.3e-34 148.7 172 50.6
Gohir.D11G294100 Gossypium hirsutum HOM05D008919 ORTHO05D011156 2.8e-25 119.4 154 42.9
Gohir.A11G281500 Gossypium hirsutum HOM05D008919 ORTHO05D011156 8.1e-25 117.9 152 42.8
Thecc.07G059400 Theobroma cacao HOM05D008919 ORTHO05D011156 1.1e-24 117.5 172 39.5
Dinv04209 Davidia involucrata HOM05D008919 ORTHO05D011156 9.0e-24 114.4 173 42.2
Gorai.007G317100 Gossypium raimondii HOM05D008919 ORTHO05D011156 9.0e-24 114.4 182 40.1
Thecc.07G059500 Theobroma cacao HOM05D008919 ORTHO05D011156 1.5e-23 113.6 151 42.4
Gohir.A11G281400 Gossypium hirsutum HOM05D008919 ORTHO05D011156 2.0e-23 113.2 151 43.7
Gorai.007G317000 Gossypium raimondii HOM05D008919 ORTHO05D011156 2.6e-23 112.8 151 43.7
COL.COLO4_09537 Corchorus olitorius HOM05D008919 ORTHO05D011156 3.8e-22 109.0 167 40.1
Gohir.D11G294000 Gossypium hirsutum HOM05D008919 ORTHO05D011156 5.4e-21 105.1 182 40.1
COL.COLO4_09538 Corchorus olitorius HOM05D008919 ORTHO05D011156 2.1e-20 103.2 166 38.0
COL.COLO4_24127 Corchorus olitorius HOM05D008919 ORTHO05D011156 3.5e-20 102.4 172 37.2
TWI74G1670 Tripterygium wilfordii HOM05D008919 ORTHO05D011156 7.8e-20 101.3 167 38.3
COL.COLO4_29350 Corchorus olitorius HOM05D008919 ORTHO05D011156 3.3e-18 95.9 186 34.4
Atru.chr12.240 Acer truncatum HOM05D058667 ORTHO05D023190 6.7e-11 71.6 164 29.3
Ciclev10003542m.g Citrus clementina HOM05D001578 ORTHO05D001207 1.1e-10 70.9 150 32.7
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 7.4e-10 68.2 124 33.9
Rhsim04G0241400 Rhododendron simsii HOM05D001578 ORTHO05D001207 9.6e-10 67.8 104 34.6
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.1e-09 66.6 124 33.1
COL.COLO4_33188 Corchorus olitorius HOM05D008919 ORTHO05D011156 3.7e-09 65.9 167 29.3
MBI09_g40718_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 1.4e-08 63.9 173 28.9
MBI09_g01820_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 1.8e-08 63.5 174 28.7
TAR365G1026 Trochodendron aralioides HOM05D001578 ORTHO05D001207 1.8e-08 63.5 119 33.6
Cpa.g.sc9.24 Carica papaya HOM05D001578 ORTHO05D001207 3.1e-08 62.8 116 33.6
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 4.0e-08 62.4 162 29.6
COL.COLO4_29449 Corchorus olitorius HOM05D036180 ORTHO05D023190 9.0e-08 61.2 140 28.6
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 9.0e-08 61.2 125 34.4
COL.COLO4_03371 Corchorus olitorius HOM05D021494 ORTHO05D022415 1.2e-07 60.8 153 26.1
DCAR_028534 Daucus carota HOM05D004113 ORTHO05D005233 1.2e-07 60.8 139 28.8
TAR365G0500 Trochodendron aralioides HOM05D001578 ORTHO05D001207 1.2e-07 60.8 147 30.6
Duzib052G0880 Durio zibethinus HOM05D001578 ORTHO05D001207 1.5e-07 60.5 117 30.8
TAR627G0716 Trochodendron aralioides HOM05D008403 ORTHO05D010317 2.6e-07 59.7 112 33.0
Atru.chr6.1289 Acer truncatum HOM05D004113 ORTHO05D001207 3.4e-07 59.3 94 39.4
Hma1.2p1_0078F.1_g039850 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 3.4e-07 59.3 132 31.1
Hma1.2p1_1400F.1_g280915 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 3.4e-07 59.3 132 31.1
RhsimUnG0017500 Rhododendron simsii HOM05D004113 ORTHO05D005233 3.4e-07 59.3 155 31.6
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 4.5e-07 58.9 129 31.0
TAR628G0877 Trochodendron aralioides HOM05D004113 ORTHO05D005233 4.5e-07 58.9 132 34.1
Ciclev10006511m.g Citrus clementina HOM05D001578 ORTHO05D001207 5.8e-07 58.5 124 33.1
Gohir.D01G023568 Gossypium hirsutum HOM05D001578 ORTHO05D001207 5.8e-07 58.5 123 30.9
MBI09_g02146_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 5.8e-07 58.5 124 31.5
TAR636G0184 Trochodendron aralioides HOM05D004113 ORTHO05D005233 5.8e-07 58.5 142 30.3
A09p08750 Brassica napus HOM05D004113 ORTHO05D005233 9.9e-07 57.8 140 32.1
BraA09t36524Z Brassica rapa HOM05D004113 ORTHO05D005233 9.9e-07 57.8 140 32.1
Gorai.002G031200 Gossypium raimondii HOM05D001578 ORTHO05D001207 9.9e-07 57.8 123 30.9
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 9.9e-07 57.8 178 29.2
Atru.chr6.1291 Acer truncatum HOM05D004113 ORTHO05D001207 1.3e-06 57.4 143 31.5
TWI56G0141 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 1.3e-06 57.4 147 27.9
Duzib151G0695 Durio zibethinus HOM05D001578 ORTHO05D001207 1.7e-06 57.0 151 29.8
Sabra10G0162100 Salix brachista HOM05D004113 ORTHO05D005233 1.7e-06 57.0 95 33.7
COL.COLO4_17218 Corchorus olitorius HOM05D021494 ORTHO05D022415 2.2e-06 56.6 123 26.8
Gohir.D10G180600 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.2e-06 56.6 148 30.4
Gorai.011G202100 Gossypium raimondii HOM05D001578 ORTHO05D001207 2.2e-06 56.6 148 30.4
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 3.8e-06 55.8 103 35.0
COL.COLO4_34578 Corchorus olitorius HOM05D001578 ORTHO05D001207 3.8e-06 55.8 147 29.9
Duzib151G0004 Durio zibethinus HOM05D001578 ORTHO05D001207 3.8e-06 55.8 78 43.6
Manes.10G035200 Manihot esculenta HOM05D004113 ORTHO05D005233 3.8e-06 55.8 149 28.2
Potri.010G209800 Populus trichocarpa HOM05D004113 ORTHO05D005233 3.8e-06 55.8 83 39.8
MBI13_g00568_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D001819 4.9e-06 55.5 140 31.4
BcaC04g23305 Brassica carinata HOM05D004113 ORTHO05D005233 6.4e-06 55.1 140 31.4
C09p09900 Brassica napus HOM05D004113 ORTHO05D005233 6.4e-06 55.1 140 31.4
BolC9t53899H Brassica oleracea HOM05D004113 ORTHO05D005233 6.4e-06 55.1 140 31.4
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 6.4e-06 55.1 143 25.9
Cfa006332 Carpinus fangiana HOM05D001578 ORTHO05D001207 6.4e-06 55.1 80 38.8
FvH4_5g19730 Fragaria vesca HOM05D001578 ORTHO05D001207 6.4e-06 55.1 113 29.2
Gohir.A01G035300 Gossypium hirsutum HOM05D001578 ORTHO05D001207 6.4e-06 55.1 123 29.3
PGR031G2424 Punica granatum HOM05D001578 ORTHO05D001207 6.4e-06 55.1 143 29.4
Sed0024266 Sechium edule HOM05D004113 ORTHO05D005233 6.4e-06 55.1 157 31.8
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 8.4e-06 54.7 171 25.1
TAR633G1609 Trochodendron aralioides HOM05D004113 ORTHO05D005233 8.4e-06 54.7 110 32.7
TAR636G3366 Trochodendron aralioides HOM05D004113 ORTHO05D005233 8.4e-06 54.7 178 26.4


User provided reference genes

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