Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05792 Corylus avellana HOM05D008919 ORTHO05D011156 8.3e-94 347.1 177 100.0
Haze_05799 Corylus avellana HOM05D008919 ORTHO05D011156 8.3e-94 347.1 177 100.0
Haze_05791 Corylus avellana HOM05D008919 ORTHO05D011156 1.2e-81 306.6 177 89.3
Haze_05798 Corylus avellana HOM05D008919 ORTHO05D011156 1.2e-81 306.6 177 89.3
Haze_05790 Corylus avellana HOM05D008919 ORTHO05D011156 4.9e-78 294.7 177 85.3
Haze_05797 Corylus avellana HOM05D008919 ORTHO05D011156 4.9e-78 294.7 177 85.3
Haze_05787 Corylus avellana HOM05D008919 ORTHO05D011156 1.6e-68 263.1 171 78.9
Haze_05794 Corylus avellana HOM05D008919 ORTHO05D011156 1.6e-68 263.1 171 78.9
Haze_05789 Corylus avellana HOM05D008919 ORTHO05D011156 5.1e-59 231.5 177 67.2
Haze_05796 Corylus avellana HOM05D008919 ORTHO05D011156 5.1e-59 231.5 177 67.2
Haze_05788 Corylus avellana HOM05D008919 ORTHO05D011156 2.2e-46 189.5 177 56.5
Haze_05795 Corylus avellana HOM05D008919 ORTHO05D011156 4.9e-46 188.3 177 55.9
Haze_05784 Corylus avellana HOM05D008919 ORTHO05D011156 1.3e-43 180.3 143 60.8
QL05p021955 Quercus lobata HOM05D008919 ORTHO05D011156 3.6e-41 172.2 174 52.9
Haze_05781 Corylus avellana HOM05D008919 ORTHO05D011156 5.3e-40 168.3 154 55.8
CiPaw.01G236600 Carya illinoinensis HOM05D008919 ORTHO05D011156 9.0e-40 167.5 187 51.9
QL05p021878 Quercus lobata HOM05D008919 ORTHO05D011156 1.1e-37 160.6 172 49.4
Haze_05783 Corylus avellana HOM05D008919 ORTHO05D011156 1.4e-37 160.2 128 57.8
QL05p021854 Quercus lobata HOM05D008919 ORTHO05D011156 1.9e-37 159.8 149 58.4
QL05p022002 Quercus lobata HOM05D008919 ORTHO05D011156 6.0e-36 154.8 180 50.0
Haze_15055 Corylus avellana HOM05D008919 ORTHO05D011156 1.3e-35 153.7 154 54.5
QL05p021916 Quercus lobata HOM05D008919 ORTHO05D011156 5.3e-32 141.7 175 48.6
Thecc.07G059400 Theobroma cacao HOM05D008919 ORTHO05D011156 3.5e-28 129.0 167 43.7
Thecc.07G059500 Theobroma cacao HOM05D008919 ORTHO05D011156 1.6e-25 120.2 166 43.4
Gohir.A11G281400 Gossypium hirsutum HOM05D008919 ORTHO05D011156 3.7e-25 119.0 151 45.0
Gorai.007G317000 Gossypium raimondii HOM05D008919 ORTHO05D011156 4.8e-25 118.6 151 45.0
Gohir.A11G281500 Gossypium hirsutum HOM05D008919 ORTHO05D011156 3.1e-24 115.9 152 44.1
Gohir.D11G294000 Gossypium hirsutum HOM05D008919 ORTHO05D011156 3.1e-24 115.9 151 44.4
Gohir.D11G294100 Gossypium hirsutum HOM05D008919 ORTHO05D011156 6.9e-24 114.8 152 43.4
Gorai.007G317100 Gossypium raimondii HOM05D008919 ORTHO05D011156 1.5e-23 113.6 152 43.4
Dinv04209 Davidia involucrata HOM05D008919 ORTHO05D011156 1.3e-22 110.5 178 41.6
COL.COLO4_24127 Corchorus olitorius HOM05D008919 ORTHO05D011156 1.7e-22 110.2 166 37.3
COL.COLO4_09537 Corchorus olitorius HOM05D008919 ORTHO05D011156 1.1e-21 107.5 171 39.8
COL.COLO4_29350 Corchorus olitorius HOM05D008919 ORTHO05D011156 2.1e-20 103.2 175 36.6
COL.COLO4_09538 Corchorus olitorius HOM05D008919 ORTHO05D011156 1.3e-19 100.5 169 37.3
TWI74G1670 Tripterygium wilfordii HOM05D008919 ORTHO05D011156 2.5e-18 96.3 168 37.5
COL.COLO4_29448 Corchorus olitorius HOM05D036180 ORTHO05D023190 1.8e-11 73.6 167 28.7
Hma1.2p1_0078F.1_g039850 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 3.9e-11 72.4 158 32.3
Hma1.2p1_1400F.1_g280915 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 3.9e-11 72.4 158 32.3
COL.COLO4_33188 Corchorus olitorius HOM05D008919 ORTHO05D011156 1.1e-10 70.9 166 30.7
Atru.chr12.240 Acer truncatum HOM05D058667 ORTHO05D023190 2.5e-10 69.7 142 30.3
TAR365G0500 Trochodendron aralioides HOM05D001578 ORTHO05D001207 5.7e-10 68.6 136 33.8
Ciclev10003542m.g Citrus clementina HOM05D001578 ORTHO05D001207 9.7e-10 67.8 148 33.1
COL.COLO4_13277 Corchorus olitorius HOM05D036180 ORTHO05D023190 1.6e-09 67.0 164 28.0
DCAR_028534 Daucus carota HOM05D004113 ORTHO05D005233 4.8e-09 65.5 179 29.1
Duzib052G0880 Durio zibethinus HOM05D001578 ORTHO05D001207 6.3e-09 65.1 147 29.9
TAR365G1026 Trochodendron aralioides HOM05D001578 ORTHO05D001207 1.1e-08 64.3 155 31.0
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 1.4e-08 63.9 136 30.1
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 1.8e-08 63.5 139 32.4
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 1.8e-08 63.5 171 26.9
Gohir.D01G023568 Gossypium hirsutum HOM05D001578 ORTHO05D001207 3.1e-08 62.8 129 31.0
PGR004G2339 Punica granatum HOM05D001578 ORTHO05D001207 5.3e-08 62.0 174 25.3
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 5.3e-08 62.0 174 30.5
MBI09_g01820_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 6.9e-08 61.6 173 28.9
Cfa006332 Carpinus fangiana HOM05D001578 ORTHO05D001207 9.0e-08 61.2 80 43.8
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 9.0e-08 61.2 148 30.4
Gorai.002G031200 Gossypium raimondii HOM05D001578 ORTHO05D001207 1.2e-07 60.8 124 31.5
Rhsim04G0241400 Rhododendron simsii HOM05D001578 ORTHO05D001207 1.5e-07 60.5 106 30.2
MBI09_g40718_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 2.6e-07 59.7 173 28.3
RcHm_v2.0_Chr4g0425861 Rosa chinensis HOM05D001578 ORTHO05D001207 2.6e-07 59.7 174 25.3
Manes.03G207000 Manihot esculenta HOM05D001578 ORTHO05D001207 3.4e-07 59.3 169 26.0
FvH4_4g20180 Fragaria vesca HOM05D001578 ORTHO05D001207 4.5e-07 58.9 170 25.3
FAN12G2195 Fragaria x ananassa HOM05D001578 ORTHO05D001207 4.5e-07 58.9 170 25.3
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 5.9e-07 58.5 112 29.5
COL.COLO4_03371 Corchorus olitorius HOM05D021494 ORTHO05D022415 5.9e-07 58.5 145 25.5
COL.COLO4_29449 Corchorus olitorius HOM05D036180 ORTHO05D023190 5.9e-07 58.5 171 26.3
Cpa.g.sc9.24 Carica papaya HOM05D001578 ORTHO05D001207 7.7e-07 58.2 156 27.6
Duzib052G0195 Durio zibethinus HOM05D001578 ORTHO05D001207 1.0e-06 57.8 156 34.6
FAN07G0539 Fragaria x ananassa HOM05D001578 ORTHO05D001207 1.0e-06 57.8 170 24.7
MBI13_g01661_MAGBIO Magnolia biondii HOM05D000036 ORTHO05D002265 1.0e-06 57.8 165 28.5
CSS0037733 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 1.7e-06 57.0 138 28.3
CANSAT78G0727 Cannabis sativa HOM05D001578 ORTHO05D001207 1.7e-06 57.0 175 26.9
Haze_01333 Corylus avellana HOM05D001578 ORTHO05D001207 1.7e-06 57.0 171 25.7
Haze_01338 Corylus avellana HOM05D001578 ORTHO05D001207 1.7e-06 57.0 171 25.7
Atru.chr6.1289 Acer truncatum HOM05D004113 ORTHO05D001207 2.2e-06 56.6 89 39.3
Gohir.A01G035300 Gossypium hirsutum HOM05D001578 ORTHO05D001207 2.2e-06 56.6 124 29.0
TAR628G0877 Trochodendron aralioides HOM05D004113 ORTHO05D005233 2.2e-06 56.6 160 33.1
MBI13_g00568_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D001819 2.9e-06 56.2 112 33.0
TWI56G0141 Tripterygium wilfordii HOM05D001445 ORTHO05D003404 2.9e-06 56.2 150 29.3
Atru.chr6.1291 Acer truncatum HOM05D004113 ORTHO05D001207 5.0e-06 55.5 125 32.0
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 5.0e-06 55.5 143 28.0
COL.COLO4_17218 Corchorus olitorius HOM05D021494 ORTHO05D022415 5.0e-06 55.5 123 26.0
Prupe.5G112600 Prunus persica HOM05D001578 ORTHO05D001207 5.0e-06 55.5 115 33.9
Sabra10G0162100 Salix brachista HOM05D004113 ORTHO05D005233 5.0e-06 55.5 152 27.6
Cfa015284 Carpinus fangiana HOM05D001578 ORTHO05D001207 6.5e-06 55.1 171 24.6


User provided reference genes

Program Settings