Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05788 Corylus avellana HOM05D008919 ORTHO05D011156 3.3e-87 325.1 173 100.0
Haze_05795 Corylus avellana HOM05D008919 ORTHO05D011156 7.3e-87 323.9 173 99.4
Haze_05781 Corylus avellana HOM05D008919 ORTHO05D011156 2.1e-62 242.7 151 84.1
Haze_05784 Corylus avellana HOM05D008919 ORTHO05D011156 4.6e-57 224.9 143 81.8
Haze_05783 Corylus avellana HOM05D008919 ORTHO05D011156 1.3e-54 216.9 131 82.4
Haze_05787 Corylus avellana HOM05D008919 ORTHO05D011156 1.3e-51 206.8 176 64.8
Haze_05794 Corylus avellana HOM05D008919 ORTHO05D011156 1.3e-51 206.8 176 64.8
Haze_05791 Corylus avellana HOM05D008919 ORTHO05D011156 1.2e-44 183.7 175 56.0
Haze_05792 Corylus avellana HOM05D008919 ORTHO05D011156 1.2e-44 183.7 177 56.5
Haze_05798 Corylus avellana HOM05D008919 ORTHO05D011156 1.2e-44 183.7 175 56.0
Haze_05799 Corylus avellana HOM05D008919 ORTHO05D011156 1.2e-44 183.7 177 56.5
Haze_05790 Corylus avellana HOM05D008919 ORTHO05D011156 2.9e-43 179.1 175 54.3
Haze_05797 Corylus avellana HOM05D008919 ORTHO05D011156 2.9e-43 179.1 175 54.3
QL05p021955 Quercus lobata HOM05D008919 ORTHO05D011156 2.6e-36 156.0 173 48.6
Haze_05789 Corylus avellana HOM05D008919 ORTHO05D011156 5.5e-34 148.3 175 48.0
Haze_05796 Corylus avellana HOM05D008919 ORTHO05D011156 5.5e-34 148.3 175 48.0
QL05p021878 Quercus lobata HOM05D008919 ORTHO05D011156 1.0e-32 144.1 176 47.2
QL05p021854 Quercus lobata HOM05D008919 ORTHO05D011156 3.9e-32 142.1 159 49.7
CiPaw.01G236600 Carya illinoinensis HOM05D008919 ORTHO05D011156 8.2e-30 134.4 180 46.1
QL05p022002 Quercus lobata HOM05D008919 ORTHO05D011156 1.3e-27 127.1 179 44.1
Haze_15055 Corylus avellana HOM05D008919 ORTHO05D011156 5.0e-27 125.2 154 42.9
QL05p021916 Quercus lobata HOM05D008919 ORTHO05D011156 1.5e-26 123.6 179 45.3
COL.COLO4_24127 Corchorus olitorius HOM05D008919 ORTHO05D011156 3.2e-18 95.9 170 36.5
Thecc.07G059500 Theobroma cacao HOM05D008919 ORTHO05D011156 7.2e-18 94.7 149 36.9
Dinv04209 Davidia involucrata HOM05D008919 ORTHO05D011156 1.6e-17 93.6 163 36.2
Thecc.07G059400 Theobroma cacao HOM05D008919 ORTHO05D011156 1.6e-17 93.6 162 34.6
Gohir.D11G294100 Gossypium hirsutum HOM05D008919 ORTHO05D011156 3.6e-17 92.4 172 34.9
Gorai.007G317000 Gossypium raimondii HOM05D008919 ORTHO05D011156 3.6e-17 92.4 170 35.9
Gohir.A11G281400 Gossypium hirsutum HOM05D008919 ORTHO05D011156 1.4e-16 90.5 170 35.3
Gohir.D11G294000 Gossypium hirsutum HOM05D008919 ORTHO05D011156 1.8e-16 90.1 170 35.3
Gohir.A11G281500 Gossypium hirsutum HOM05D008919 ORTHO05D011156 8.8e-16 87.8 174 33.3
Gorai.007G317100 Gossypium raimondii HOM05D008919 ORTHO05D011156 1.2e-15 87.4 172 33.1
COL.COLO4_29350 Corchorus olitorius HOM05D008919 ORTHO05D011156 4.4e-15 85.5 180 31.7
TWI74G1670 Tripterygium wilfordii HOM05D008919 ORTHO05D011156 2.2e-14 83.2 166 35.5
COL.COLO4_09538 Corchorus olitorius HOM05D008919 ORTHO05D011156 2.8e-14 82.8 165 31.5
COL.COLO4_09537 Corchorus olitorius HOM05D008919 ORTHO05D011156 6.3e-14 81.6 166 32.5
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 6.1e-09 65.1 117 31.6
Duzib052G0880 Durio zibethinus HOM05D001578 ORTHO05D001207 6.1e-09 65.1 121 33.9
Cpa.g.sc9.24 Carica papaya HOM05D001578 ORTHO05D001207 1.0e-08 64.3 110 38.2
COL.COLO4_33188 Corchorus olitorius HOM05D008919 ORTHO05D011156 1.8e-08 63.5 164 29.3
FvH4_5g19730 Fragaria vesca HOM05D001578 ORTHO05D001207 1.8e-08 63.5 174 27.0
Thecc.09G068900 Theobroma cacao HOM05D001445 ORTHO05D003404 5.2e-08 62.0 168 28.0
TAR365G0682 Trochodendron aralioides HOM05D001578 ORTHO05D001207 5.2e-08 62.0 134 33.6
Ciclev10004017m.g Citrus clementina HOM05D001578 ORTHO05D001207 6.8e-08 61.6 149 31.5
TAR365G1026 Trochodendron aralioides HOM05D001578 ORTHO05D001207 1.2e-07 60.8 122 33.6
Rhsim04G0241400 Rhododendron simsii HOM05D001578 ORTHO05D001207 1.5e-07 60.5 126 31.7
Ciclev10002621m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.0e-07 60.1 148 31.1
Prupe.5G112600 Prunus persica HOM05D001578 ORTHO05D001207 2.0e-07 60.1 143 33.6
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 2.6e-07 59.7 148 27.7
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 4.4e-07 58.9 147 27.9
MBI13_g00568_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D001819 4.4e-07 58.9 141 31.9
MBI09_g40718_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 9.8e-07 57.8 175 26.3
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 9.8e-07 57.8 102 33.3
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.3e-06 57.4 101 32.7
Hma1.2p1_0078F.1_g039850 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 1.7e-06 57.0 165 29.1
Hma1.2p1_1400F.1_g280915 Hydrangea macrophylla HOM05D001578 ORTHO05D001207 1.7e-06 57.0 165 29.1
TAR365G0500 Trochodendron aralioides HOM05D001578 ORTHO05D001207 2.8e-06 56.2 145 33.8
Gorai.002G031200 Gossypium raimondii HOM05D001578 ORTHO05D001207 3.7e-06 55.8 137 29.9
MBI09_g01820_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D001207 3.7e-06 55.8 131 29.8
CANSAT54G1773 Cannabis sativa HOM05D003556 ORTHO05D003404 6.3e-06 55.1 143 28.0
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 6.3e-06 55.1 180 28.9
Gohir.D01G023568 Gossypium hirsutum HOM05D001578 ORTHO05D001207 6.3e-06 55.1 137 29.9
MD03G1249700 Malus domestica HOM05D001578 ORTHO05D001207 6.3e-06 55.1 98 34.7
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 8.3e-06 54.7 149 28.2
Prupe.3G007700 Prunus persica HOM05D001578 ORTHO05D001207 8.3e-06 54.7 141 32.6
PGSC0003DMG400044426 Solanum tuberosum HOM05D004113 ORTHO05D005233 8.3e-06 54.7 137 29.2


User provided reference genes

Program Settings