Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05636 Corylus avellana HOM05D008821 ORTHO05D010464 7.1e-48 194.1 140 100.0
Cfa000919 Carpinus fangiana HOM05D008821 ORTHO05D010464 7.8e-39 164.1 141 92.2
CiPaw.09G121300 Carya illinoinensis HOM05D008821 ORTHO05D010464 1.3e-20 103.6 139 44.6
Lj4g0018254 Lotus japonicus HOM05D008821 ORTHO05D010464 2.5e-13 79.3 77 53.2
TAR460G0006 Trochodendron aralioides HOM05D008821 ORTHO05D010464 3.3e-13 79.0 75 58.7
Nn4g26609 Nelumbo nucifera HOM05D008821 ORTHO05D010464 5.7e-13 78.2 75 56.0
Lj5g0007792 Lotus japonicus HOM05D008821 ORTHO05D010464 2.1e-12 76.3 77 51.9
PSO541G6549 Papaver somniferum HOM05D008821 ORTHO05D010464 4.8e-12 75.1 75 52.0
Prupe.4G083800 Prunus persica HOM05D008821 ORTHO05D010464 1.1e-11 73.9 76 59.2
Oeu007934.1 Olea europaea HOM05D008821 ORTHO05D010464 4.1e-11 72.0 70 54.3
Oeu007936.1 Olea europaea HOM05D008821 ORTHO05D010464 4.1e-11 72.0 70 54.3
FAN21G0539 Fragaria x ananassa HOM05D008821 ORTHO05D010464 5.3e-11 71.6 79 51.9
RcHm_v2.0_Chr5g0014511 Rosa chinensis HOM05D008821 ORTHO05D010464 5.3e-11 71.6 79 54.4
FvH4_3g05210 Fragaria vesca HOM05D008821 ORTHO05D010464 6.9e-11 71.2 79 51.9
Thecc.06G147000 Theobroma cacao HOM05D008821 ORTHO05D010464 1.5e-10 70.1 134 35.8
Gohir.D06G143700 Gossypium hirsutum HOM05D008821 ORTHO05D010464 2.6e-10 69.3 73 52.1
MBI18_g11239_MAGBIO Magnolia biondii HOM05D008821 ORTHO05D010464 3.4e-10 68.9 65 58.5
Gorai.010G167500 Gossypium raimondii HOM05D008821 ORTHO05D010464 5.9e-10 68.2 73 52.1
FAN16G1747 Fragaria x ananassa HOM05D008821 ORTHO05D010464 1.0e-09 67.4 79 50.6
FAN16G2928 Fragaria x ananassa HOM05D008821 ORTHO05D010464 1.0e-09 67.4 79 50.6
TPR.G9571 Trifolium pratense HOM05D008821 ORTHO05D010464 2.9e-09 65.9 65 53.8
Psat7g081560 Pisum sativum HOM05D008821 ORTHO05D010464 3.8e-09 65.5 65 52.3
Gohir.A06G139000 Gossypium hirsutum HOM05D008821 ORTHO05D010464 5.0e-09 65.1 72 50.0
Atru.chr10.1160 Acer truncatum HOM05D008821 ORTHO05D010464 1.1e-08 63.9 76 46.1
Sc24g0001660 Simmondsia chinensis HOM05D008821 ORTHO05D010464 1.1e-08 63.9 75 40.0
Glyma.05G142600 Glycine max HOM05D008821 ORTHO05D010464 3.2e-08 62.4 78 51.3
Manes.15G123932 Manihot esculenta HOM05D008821 ORTHO05D010464 3.2e-08 62.4 77 46.8
Medtr5g077560 Medicago truncatula HOM05D008821 ORTHO05D010464 5.5e-08 61.6 65 49.2
MELO3C007119.2 Cucumis melo HOM05D008821 ORTHO05D010464 7.2e-08 61.2 74 48.6
CsaV3_6G051900 Cucumis sativus L. HOM05D000116 ORTHO05D010464 7.2e-08 61.2 53 60.4
ClCG01G024780 Citrullus lanatus HOM05D008821 ORTHO05D010464 1.2e-07 60.5 74 48.6
Phvul.002G180600 Phaseolus vulgaris HOM05D008821 ORTHO05D010464 1.2e-07 60.5 77 48.1
Aqoxy1G01677 Aquilegia oxysepala HOM05D008821 ORTHO05D010464 1.6e-07 60.1 73 49.3
CSS0030437 Camellia sinensis var. sinensis HOM05D008821 ORTHO05D010464 2.1e-07 59.7 64 46.9
Glyma.08G098600 Glycine max HOM05D008821 ORTHO05D010464 6.1e-07 58.2 76 46.1
MBI02_g21430_MAGBIO Magnolia biondii HOM05D008821 ORTHO05D010464 6.7e-06 54.7 75 46.7


User provided reference genes

Program Settings