Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05517 Corylus avellana HOM05D016039 ORTHO05D000167 4.5e-70 267.7 125 100.0
Haze_05315 Corylus avellana HOM05D022711 ORTHO05D000126 2.3e-37 159.1 81 92.6
Haze_18012 Corylus avellana HOM05D022711 ORTHO05D000167 2.9e-24 115.5 87 57.5
Haze_12823 Corylus avellana HOM05D016039 ORTHO05D000167 4.0e-18 95.1 84 51.2
Cfa011332 Carpinus fangiana HOM05D000140 ORTHO05D000087 9.2e-15 84.0 82 46.3
Haze_27263 Corylus avellana HOM05D000003 ORTHO05D000167 9.2e-15 84.0 80 46.2
Haze_20846 Corylus avellana HOM05D016039 ORTHO05D022266 1.2e-14 83.6 84 44.0
Haze_13874 Corylus avellana HOM05D016406 ORTHO05D000167 4.6e-14 81.6 91 40.7
Cfa008696 Carpinus fangiana HOM05D016039 ORTHO05D022266 7.8e-14 80.9 84 42.9
Haze_23663 Corylus avellana HOM05D018234 ORTHO05D000167 1.1e-12 77.0 86 37.2
Haze_27622 Corylus avellana HOM05D000003 ORTHO05D000167 1.1e-12 77.0 84 38.1
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 3.3e-12 75.5 79 44.3
Haze_13551 Corylus avellana HOM05D000003 ORTHO05D000167 4.3e-12 75.1 81 39.5
Cfa002531 Carpinus fangiana HOM05D022711 ORTHO05D000167 2.1e-11 72.8 86 34.9
Cfa002259 Carpinus fangiana HOM05D012052 ORTHO05D000167 2.8e-11 72.4 81 38.3
Cfa015444 Carpinus fangiana HOM05D016039 ORTHO05D022266 4.7e-11 71.6 69 46.4
CiPaw.16G012000 Carya illinoinensis HOM05D000003 ORTHO05D000006 6.2e-11 71.2 81 38.3
Haze_07382 Corylus avellana HOM05D012052 ORTHO05D000167 6.2e-11 71.2 74 41.9
Haze_23165 Corylus avellana HOM05D000003 ORTHO05D000167 6.2e-11 71.2 84 36.9
Haze_25171 Corylus avellana HOM05D012052 ORTHO05D013566 2.3e-10 69.3 78 37.2
Atru.chr1.763 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-09 67.0 76 38.2
Haze_05910 Corylus avellana HOM05D012052 ORTHO05D013566 1.2e-09 67.0 86 36.0
Haze_16052 Corylus avellana HOM05D033627 ORTHO05D034205 1.5e-09 66.6 81 40.7
Haze_17656 Corylus avellana HOM05D000003 ORTHO05D000167 3.4e-09 65.5 91 37.4
Haze_19506 Corylus avellana HOM05D000003 ORTHO05D000167 3.4e-09 65.5 91 37.4
Haze_20250 Corylus avellana HOM05D016406 ORTHO05D000167 4.4e-09 65.1 100 33.0
Haze_01709 Corylus avellana HOM05D004092 ORTHO05D005448 5.8e-09 64.7 76 39.5
Cfa000480 Carpinus fangiana HOM05D000003 ORTHO05D000167 1.3e-08 63.5 63 42.9
CSS0000735 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 2.2e-08 62.8 80 37.5
Cfa019600 Carpinus fangiana HOM05D012052 ORTHO05D000167 2.2e-08 62.8 67 43.3
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 2.9e-08 62.4 84 34.5
Atru.chr7.1139 Acer truncatum HOM05D000003 ORTHO05D000167 4.9e-08 61.6 82 32.9
EL10Ac4g09190 Beta vulgaris HOM05D000003 ORTHO05D000167 1.1e-07 60.5 89 33.7
Duzib170G1141 Durio zibethinus HOM05D000003 ORTHO05D000167 1.9e-07 59.7 86 33.7
CiPaw.11G082900 Carya illinoinensis HOM05D000003 ORTHO05D000004 3.2e-07 58.9 71 35.2
Atru.chr12.2338 Acer truncatum HOM05D000003 ORTHO05D000167 4.1e-07 58.5 79 40.5
Atru.chr2.1933 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-07 58.5 81 39.5
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 7.1e-07 57.8 57 47.4
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 9.2e-07 57.4 94 35.1
Haze_18357 Corylus avellana HOM05D025031 ORTHO05D000167 9.2e-07 57.4 74 39.2
Atru.chr13.2074 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 84 34.5
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 1.6e-06 56.6 78 34.6
Atru.chr11.1421 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-06 56.2 84 31.0
Atru.chr13.1628 Acer truncatum HOM05D000003 ORTHO05D000167 2.1e-06 56.2 81 37.0
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 2.1e-06 56.2 80 33.8
Atru.chr5.1598 Acer truncatum HOM05D000856 ORTHO05D000167 2.7e-06 55.8 85 31.8
Atru.chr8.605 Acer truncatum HOM05D000003 ORTHO05D000167 2.7e-06 55.8 94 35.1
Atru.chr1.2765 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-06 55.5 80 30.0
Atru.chr6.889 Acer truncatum HOM05D000003 ORTHO05D000004 3.5e-06 55.5 79 35.4
COL.COLO4_13164 Corchorus olitorius HOM05D009774 ORTHO05D000167 3.5e-06 55.5 88 33.0
Atru.chr1.2556 Acer truncatum HOM05D000003 ORTHO05D000004 4.6e-06 55.1 81 34.6
Atru.chr10.362 Acer truncatum HOM05D000003 ORTHO05D000167 4.6e-06 55.1 83 33.7
Atru.chr11.265 Acer truncatum HOM05D000003 ORTHO05D000004 4.6e-06 55.1 84 34.5
CANSAT35G0312 Cannabis sativa HOM05D000003 ORTHO05D000167 4.6e-06 55.1 89 31.5
CANSAT78G1465 Cannabis sativa HOM05D000003 ORTHO05D000004 4.6e-06 55.1 87 32.2
Cfa006225 Carpinus fangiana HOM05D009031 ORTHO05D000167 4.6e-06 55.1 71 35.2
Atru.chr1.3159 Acer truncatum HOM05D000003 ORTHO05D000167 6.0e-06 54.7 84 28.6
Atru.chr8.183 Acer truncatum HOM05D000003 ORTHO05D000167 6.0e-06 54.7 83 31.3
Atru.chr8.265 Acer truncatum HOM05D000003 ORTHO05D000167 6.0e-06 54.7 83 31.3
TWI74G1173 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.0e-06 54.7 86 31.4
Atru.chr2.108 Acer truncatum HOM05D000003 ORTHO05D000004 7.8e-06 54.3 80 33.8
Atru.chr5.2480 Acer truncatum HOM05D000003 ORTHO05D000167 7.8e-06 54.3 78 30.8
Cfa001529 Carpinus fangiana HOM05D016039 ORTHO05D000167 7.8e-06 54.3 39 59.0
Haze_20811 Corylus avellana HOM05D002708 ORTHO05D003516 7.8e-06 54.3 73 37.0


User provided reference genes

Program Settings