Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 3.3e-113 411.8 217 100.0
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 1.9e-44 183.3 201 56.2
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 4.3e-44 182.2 208 53.4
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 9.6e-44 181.0 212 54.2
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 1.3e-43 180.6 212 53.3
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 1.4e-42 177.2 218 53.2
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 2.0e-41 173.3 223 51.1
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.0e-41 173.3 217 50.7
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 2.0e-41 173.3 216 50.0
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 2.6e-41 172.9 209 51.2
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 3.4e-41 172.6 217 50.7
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 3.4e-41 172.6 217 50.7
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 4.5e-41 172.2 217 51.2
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 1.7e-40 170.2 208 51.4
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 2.9e-40 169.5 217 51.6
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.9e-40 169.5 216 48.1
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 3.8e-40 169.1 213 50.7
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 6.4e-40 168.3 213 49.3
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 1.4e-39 167.2 212 48.1
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.4e-39 167.2 209 51.2
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.4e-39 166.4 219 49.8
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 3.2e-39 166.0 200 50.5
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 3.2e-39 166.0 185 56.2
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 4.2e-39 165.6 206 48.5
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 5.5e-39 165.2 225 50.7
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 5.5e-39 165.2 208 50.5
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 9.3e-39 164.5 217 48.8
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 9.3e-39 164.5 194 52.6
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 1.2e-38 164.1 333 42.0
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.6e-38 163.7 211 48.8
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 3.5e-38 162.5 188 53.2
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 4.6e-38 162.2 219 48.9
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 2.3e-37 159.8 217 47.9
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 2.3e-37 159.8 187 52.4
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 3.0e-37 159.5 222 46.8
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.1e-37 158.7 207 46.9
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 6.7e-37 158.3 201 49.8
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 1.1e-36 157.5 204 50.0
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 1.1e-36 157.5 208 48.1
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 3.3e-36 156.0 208 46.6
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.6e-35 153.7 207 45.9
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 1.6e-35 153.7 212 46.2
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.6e-35 153.7 222 45.5
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 2.1e-35 153.3 217 46.1
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 2.1e-35 153.3 214 44.4
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 8.1e-35 151.4 204 46.6
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 1.1e-34 151.0 201 46.8
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.8e-34 150.2 193 48.7
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.4e-34 149.8 201 47.8
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.4e-34 149.8 209 45.0
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 3.1e-34 149.4 204 45.6
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 5.3e-34 148.7 218 44.5
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 6.9e-34 148.3 193 48.7
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 1.2e-33 147.5 204 47.1
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.2e-33 147.5 212 44.3
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.2e-33 147.5 207 43.0
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.5e-33 147.1 218 43.1
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 2.6e-33 146.4 208 44.2
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 2.6e-33 146.4 204 45.1
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.6e-33 146.4 207 43.0
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 3.4e-33 146.0 207 43.0
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.4e-33 146.0 212 43.9
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 5.8e-33 145.2 212 43.9
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 7.6e-33 144.8 208 43.8
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 7.6e-33 144.8 208 43.8
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 1.3e-32 144.1 207 43.5
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 1.3e-32 144.1 203 46.3
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 2.2e-32 143.3 199 45.2
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 3.8e-32 142.5 199 44.7
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 3.8e-32 142.5 211 44.5
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 6.5e-32 141.7 196 46.9
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 1.4e-31 140.6 207 42.0
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 1.4e-31 140.6 185 48.1
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 1.9e-31 140.2 201 44.3
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 7.1e-31 138.3 225 41.8
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 7.1e-31 138.3 200 44.0
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 7.1e-31 138.3 175 48.6
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 7.1e-31 138.3 214 41.6
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 3.5e-30 136.0 212 40.6
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 4.6e-30 135.6 174 47.7
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.8e-29 133.7 209 40.2
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 1.8e-29 133.7 209 40.2
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 1.8e-29 133.7 211 41.2
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 1.8e-29 133.7 209 40.7
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.8e-29 133.7 214 41.6
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 2.3e-29 133.3 186 45.7
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 3.0e-29 132.9 217 42.4
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.0e-29 132.9 217 42.9
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 8.7e-29 131.3 223 40.4
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 1.1e-28 131.0 218 41.3
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 1.9e-28 130.2 218 41.3
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 1.9e-28 130.2 218 41.3
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.9e-28 130.2 209 40.2
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 3.3e-28 129.4 218 40.8
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 3.3e-28 129.4 218 41.3
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 9.6e-28 127.9 193 42.0
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 1.6e-27 127.1 222 40.1
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 1.6e-27 127.1 217 41.0
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 1.8e-26 123.6 222 38.7
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 3.1e-26 122.9 187 42.2
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 3.1e-26 122.9 198 42.4
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.1e-26 122.9 197 42.1
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 4.1e-26 122.5 195 43.6
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 5.3e-26 122.1 196 40.8
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 1.2e-25 120.9 196 42.9
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.5e-25 120.6 146 50.7
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 2.6e-25 119.8 197 41.1
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 2.9e-24 116.3 189 40.7
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 1.1e-23 114.4 189 40.2
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 3.2e-23 112.8 187 41.2
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.2e-23 112.8 215 37.2
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.6e-22 109.4 188 40.4
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 4.6e-22 109.0 218 36.2
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.6e-22 109.0 175 42.9
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 8.7e-21 104.8 103 58.3
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 9.7e-20 101.3 169 40.2
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.4e-15 87.4 114 48.2
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.8e-13 80.5 167 36.5
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 2.3e-13 80.1 74 58.1
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 8.8e-13 78.2 110 44.5
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 8.2e-11 71.6 190 32.1
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.2e-09 67.8 81 50.6
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 3.4e-09 66.2 196 28.6
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 4.5e-09 65.9 196 28.6
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.5e-07 60.1 146 33.6
Hma1.2p1_0871F.1_g231040 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.7e-06 55.8 59 49.2


User provided reference genes

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