Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05316 Corylus avellana HOM05D000677 ORTHO05D014201 2.2e-34 148.3 68 100.0
Haze_03095 Corylus avellana HOM05D000677 ORTHO05D000727 1.8e-28 128.6 77 81.8
QL04p012819 Quercus lobata HOM05D000677 ORTHO05D000727 5.3e-25 117.1 77 72.7
QL04p013364 Quercus lobata HOM05D000677 ORTHO05D000727 5.3e-25 117.1 77 72.7
CiPaw.13G010400 Carya illinoinensis HOM05D000677 ORTHO05D000727 3.8e-23 110.9 77 71.4
Lj3g0019403 Lotus japonicus HOM05D000677 ORTHO05D000727 2.1e-21 105.1 77 64.9
Prupe.2G028600 Prunus persica HOM05D000677 ORTHO05D000727 6.1e-21 103.6 77 62.3
Medtr1g052505 Medicago truncatula HOM05D000677 ORTHO05D000727 1.0e-20 102.8 79 63.3
Psat0s3281g0040 Pisum sativum HOM05D000677 ORTHO05D000727 4.0e-20 100.9 77 61.0
TPR.G21748 Trifolium pratense HOM05D000677 ORTHO05D000727 5.2e-20 100.5 77 61.0
Cc02_g29510 Coffea canephora HOM05D000677 ORTHO05D000727 1.2e-19 99.4 80 63.8
Medtr4g037670 Medicago truncatula HOM05D000677 ORTHO05D000727 1.2e-19 99.4 77 59.7
QL04p013338 Quercus lobata HOM05D000677 ORTHO05D000727 3.4e-19 97.8 77 59.7
Lalb_Chr03g0024231 Lupinus albus HOM05D000677 ORTHO05D000727 7.5e-19 96.7 77 61.0
CiPaw.13G010300 Carya illinoinensis HOM05D000677 ORTHO05D000727 9.7e-19 96.3 77 57.1
PGR044G1200 Punica granatum HOM05D000677 ORTHO05D000727 1.3e-18 95.9 77 58.4
Sabra01G0017700 Salix brachista HOM05D000677 ORTHO05D000727 1.3e-18 95.9 77 57.1
DCAR_022357 Daucus carota HOM05D000677 ORTHO05D000727 1.7e-18 95.5 80 60.0
Solyc01g068380.3 Solanum lycopersicum HOM05D000677 ORTHO05D000727 2.2e-18 95.1 79 62.0
Sopen01g030340 Solanum pennellii HOM05D000677 ORTHO05D000727 2.2e-18 95.1 79 62.0
Dinv32056 Davidia involucrata HOM05D000677 ORTHO05D000727 2.8e-18 94.7 80 58.8
RcHm_v2.0_Chr6g0289041 Rosa chinensis HOM05D000677 ORTHO05D000727 3.7e-18 94.4 77 57.1
Migut.D00795 Erythranthe guttata HOM05D000677 ORTHO05D000727 6.3e-18 93.6 80 60.0
Glyma.12G012000 Glycine max HOM05D000677 ORTHO05D000727 6.3e-18 93.6 77 55.8
QL04p012780 Quercus lobata HOM05D000677 ORTHO05D000727 8.3e-18 93.2 77 59.7
QL04p013403 Quercus lobata HOM05D000677 ORTHO05D000727 8.3e-18 93.2 77 59.7
VMungo1127G2073 Vigna mungo HOM05D000677 ORTHO05D000727 8.3e-18 93.2 77 58.4
SGA_v2.0_scaffold158G37453 Striga asiatica HOM05D000677 ORTHO05D000727 1.4e-17 92.4 80 56.2
CANSAT80G0361 Cannabis sativa HOM05D000677 ORTHO05D000727 1.8e-17 92.0 77 54.5
MBI13_g41711_MAGBIO Magnolia biondii HOM05D000677 ORTHO05D000727 1.8e-17 92.0 79 57.0
MD07G1028400 Malus domestica HOM05D000677 ORTHO05D000727 1.8e-17 92.0 77 57.1
MD07G1029700 Malus domestica HOM05D000677 ORTHO05D000727 1.8e-17 92.0 77 57.1
TAR369G0724 Trochodendron aralioides HOM05D000677 ORTHO05D000727 1.8e-17 92.0 79 60.8
Hma1.2p1_0184F.1_g081110 Hydrangea macrophylla HOM05D000677 ORTHO05D000727 2.4e-17 91.7 80 57.5
Glyma.09G225000 Glycine max HOM05D000677 ORTHO05D000727 3.1e-17 91.3 77 54.5
Peaxi162Scf00309g00120 Petunia axillaris HOM05D000677 ORTHO05D000727 3.1e-17 91.3 77 58.4
Ciclev10033461m.g Citrus clementina HOM05D000677 ORTHO05D000727 4.1e-17 90.9 77 53.2
Nitab4.5_0006307g0050 Nicotiana tabacum HOM05D000677 ORTHO05D000727 4.1e-17 90.9 79 57.0
Psat2g118160 Pisum sativum HOM05D000677 ORTHO05D000727 4.1e-17 90.9 78 56.4
Potri.001G023400 Populus trichocarpa HOM05D000677 ORTHO05D000727 4.1e-17 90.9 77 57.1
CSS0009873 Camellia sinensis var. sinensis HOM05D000677 ORTHO05D000727 5.3e-17 90.5 78 59.0
Phvul.011G014800 Phaseolus vulgaris HOM05D000677 ORTHO05D000727 5.3e-17 90.5 77 57.1
Potri.003G202200 Populus trichocarpa HOM05D000677 ORTHO05D000727 5.3e-17 90.5 75 57.3
RcHm_v2.0_Chr1g0319551 Rosa chinensis HOM05D000677 ORTHO05D000727 5.3e-17 90.5 77 57.1
CANSAT35G0231 Cannabis sativa HOM05D000677 ORTHO05D000727 7.0e-17 90.1 77 53.2
DCAR_003235 Daucus carota HOM05D000063 ORTHO05D003101 7.0e-17 90.1 78 59.0
COL.COLO4_25840 Corchorus olitorius HOM05D000677 ORTHO05D000727 9.1e-17 89.7 77 58.4
Nn7g36482 Nelumbo nucifera HOM05D000677 ORTHO05D000727 9.1e-17 89.7 82 56.1
CAN.G179.42 Capsicum annuum HOM05D000677 ORTHO05D000727 1.2e-16 89.4 79 55.7
Os01g0800500 Oryza sativa ssp. japonica HOM05D000677 ORTHO05D000727 1.2e-16 89.4 78 55.1
RcHm_v2.0_Chr4g0411981 Rosa chinensis HOM05D000677 ORTHO05D000727 1.2e-16 89.4 77 55.8
CANSAT80G2597 Cannabis sativa HOM05D000677 ORTHO05D000727 1.6e-16 89.0 77 53.2
MELO3C033949.2 Cucumis melo HOM05D000677 ORTHO05D000727 1.6e-16 89.0 78 53.8
FAN01G1016 Fragaria x ananassa HOM05D000677 ORTHO05D000727 2.0e-16 88.6 77 54.5
arahy.Tifrunner.gnm1.ann1.J3JZ4F Arachis hypogaea HOM05D000677 ORTHO05D000727 2.7e-16 88.2 77 58.4
arahy.Tifrunner.gnm1.ann1.ZE4J6B Arachis hypogaea HOM05D000677 ORTHO05D000727 2.7e-16 88.2 77 58.4
Eucgr.J01195 Eucalyptus grandis HOM05D000677 ORTHO05D000727 2.7e-16 88.2 77 58.4
Nitab4.5_0001029g0090 Nicotiana tabacum HOM05D000677 ORTHO05D000727 2.7e-16 88.2 79 54.4
Oeu006104.1 Olea europaea HOM05D000677 ORTHO05D000727 2.7e-16 88.2 80 55.0
GSVIVG01000848001 Vitis vinifera HOM05D000677 ORTHO05D000727 2.7e-16 88.2 77 59.7
Zm00001eb369470 Zea mays HOM05D000677 ORTHO05D000727 4.5e-16 87.4 78 52.6
CANSAT56G2618 Cannabis sativa HOM05D000677 ORTHO05D000727 5.9e-16 87.0 77 51.9
ClCG01G007610 Citrullus lanatus HOM05D000677 ORTHO05D000727 5.9e-16 87.0 75 56.0
Eucgr.J01197 Eucalyptus grandis HOM05D000677 ORTHO05D000727 5.9e-16 87.0 77 57.1
FvH4_7g02230 Fragaria vesca HOM05D000677 ORTHO05D000727 5.9e-16 87.0 77 53.2
Aqoxy2G00293 Aquilegia oxysepala HOM05D000677 ORTHO05D000727 1.0e-15 86.3 78 55.1
CAN.G179.52 Capsicum annuum HOM05D000677 ORTHO05D000727 1.0e-15 86.3 80 53.8
Haze_21840 Corylus avellana HOM05D000677 ORTHO05D014201 1.0e-15 86.3 55 69.1
Eucgr.J01196 Eucalyptus grandis HOM05D000677 ORTHO05D000727 1.0e-15 86.3 77 57.1
Ca_19648_v3 Cicer arietinum L. HOM05D000677 ORTHO05D000727 1.3e-15 85.9 52 71.2
RcHm_v2.0_Chr4g0424731 Rosa chinensis HOM05D000677 ORTHO05D000727 1.3e-15 85.9 77 53.2
Cpa.g.sc197.8 Carica papaya HOM05D000677 ORTHO05D000727 1.7e-15 85.5 77 53.2
CsaV3_5G024650 Cucumis sativus L. HOM05D000677 ORTHO05D000727 1.7e-15 85.5 50 68.0
Phvul.011G014900 Phaseolus vulgaris HOM05D000677 ORTHO05D000727 1.7e-15 85.5 77 51.9
Hund15709 Selenicereus undatus HOM05D000677 ORTHO05D000727 1.7e-15 85.5 78 52.6
EL10Ac2g02866 Beta vulgaris HOM05D000677 ORTHO05D000727 2.9e-15 84.7 78 55.1
Gorai.013G015400 Gossypium raimondii HOM05D000677 ORTHO05D000727 2.9e-15 84.7 77 50.6
PSO339G0815 Papaver somniferum HOM05D000677 ORTHO05D000727 2.9e-15 84.7 77 54.5
Thecc.10G005600 Theobroma cacao HOM05D000677 ORTHO05D000727 5.0e-15 84.0 77 54.5
Atru.chr11.2501 Acer truncatum HOM05D000677 ORTHO05D000727 6.5e-15 83.6 72 56.9
AUR62002444 Chenopodium quinoa HOM05D000677 ORTHO05D000727 6.5e-15 83.6 63 61.9
Gohir.D13G014202 Gossypium hirsutum HOM05D000677 ORTHO05D000727 6.5e-15 83.6 77 53.2
Sed0026976 Sechium edule HOM05D000677 ORTHO05D000727 6.5e-15 83.6 79 53.2
HPP92_016886 Vanilla planifolia HOM05D000677 ORTHO05D000727 6.5e-15 83.6 78 51.3
MELO3C033753.2 Cucumis melo HOM05D000677 ORTHO05D000727 8.5e-15 83.2 81 53.1
Thecc.10G005500 Theobroma cacao HOM05D000677 ORTHO05D000727 8.5e-15 83.2 50 74.0
VMungo1127G2079 Vigna mungo HOM05D000677 ORTHO05D000727 8.5e-15 83.2 77 49.4
Atru.chr11.2471 Acer truncatum HOM05D000677 ORTHO05D000727 1.1e-14 82.8 77 54.5
Atru.chr11.2500 Acer truncatum HOM05D000677 ORTHO05D000727 1.1e-14 82.8 77 54.5
Duzib128G0211 Durio zibethinus HOM05D000677 ORTHO05D000727 1.5e-14 82.4 67 56.7
PSO513G0192 Papaver somniferum HOM05D000677 ORTHO05D000727 1.9e-14 82.0 77 54.5
ATR0721G131 Amborella trichopoda HOM05D000677 ORTHO05D000727 2.5e-14 81.6 79 48.1
Duzib106G0580 Durio zibethinus HOM05D000677 ORTHO05D000727 2.5e-14 81.6 77 50.6
MBI05_g17777_MAGBIO Magnolia biondii HOM05D000677 ORTHO05D014201 2.5e-14 81.6 54 64.8
AUR62026815 Chenopodium quinoa HOM05D000677 ORTHO05D000727 3.2e-14 81.3 78 52.6
Gorai.013G015200 Gossypium raimondii HOM05D000677 ORTHO05D000727 3.2e-14 81.3 77 51.9
AUR62037237 Chenopodium quinoa HOM05D000677 ORTHO05D000727 4.2e-14 80.9 78 52.6
CsaV3_5G024620 Cucumis sativus L. HOM05D000677 ORTHO05D000727 4.2e-14 80.9 80 51.2
Zm00001eb369460 Zea mays HOM05D000677 ORTHO05D000727 4.2e-14 80.9 78 52.6
AUR62037236 Chenopodium quinoa HOM05D000677 ORTHO05D000727 5.5e-14 80.5 52 65.4
Gohir.A13G013000 Gossypium hirsutum HOM05D000677 ORTHO05D000727 5.5e-14 80.5 77 51.9
COL.COLO4_25836 Corchorus olitorius HOM05D000677 ORTHO05D000727 7.2e-14 80.1 50 70.0
Haze_08484 Corylus avellana HOM05D000677 ORTHO05D000727 7.2e-14 80.1 52 63.5
FAN03G0987 Fragaria x ananassa HOM05D000677 ORTHO05D000727 7.2e-14 80.1 52 65.4
Gohir.D13G014002 Gossypium hirsutum HOM05D000677 ORTHO05D000727 7.2e-14 80.1 77 50.6
ECA248G1819 Erigeron canadensis HOM05D000006 ORTHO05D000091 9.4e-14 79.7 77 53.2
HanXRQChr01g0016411 Helianthus annuus HOM05D000677 ORTHO05D000727 9.4e-14 79.7 50 66.0
TWI38G2282 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 1.6e-13 79.0 77 51.9
FAN06G4392 Fragaria x ananassa HOM05D000677 ORTHO05D000727 2.1e-13 78.6 52 63.5
Lsat_1_v5_gn_1_98020 Lactuca sativa HOM05D000677 ORTHO05D000727 2.1e-13 78.6 50 66.0
Manes.04G164100 Manihot esculenta HOM05D000677 ORTHO05D000727 2.1e-13 78.6 50 62.0
SEGI_13686 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 2.7e-13 78.2 52 65.4
SEGI_40315 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 2.7e-13 78.2 81 50.6
Sc10g0004250 Simmondsia chinensis HOM05D000677 ORTHO05D000727 2.7e-13 78.2 78 53.8
HanXRQChr13g0403851 Helianthus annuus HOM05D000677 ORTHO05D000727 4.7e-13 77.4 77 50.6
HPP92_016885 Vanilla planifolia HOM05D000677 ORTHO05D000727 6.1e-13 77.0 78 48.7
Eucgr.J01199 Eucalyptus grandis HOM05D000677 ORTHO05D000727 8.0e-13 76.6 73 50.7
SMO356G0136 Selaginella moellendorffii HOM05D000677 ORTHO05D000727 1.8e-12 75.5 57 59.6
SEGI_15600 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 1.8e-12 75.5 50 66.0
Lj7A579T38 Lonicera japonica HOM05D000677 ORTHO05D000727 3.0e-12 74.7 77 49.4
SEGI_19673 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 1.5e-11 72.4 50 64.0
SEGI_03563 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 2.6e-11 71.6 50 58.0
TWI38G0884 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 3.4e-11 71.2 77 50.6
TWI38G1132 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 3.4e-11 71.2 77 48.1
SMO356G0026 Selaginella moellendorffii HOM05D000677 ORTHO05D000727 1.4e-09 65.9 82 45.1
Pp3c15_6210 Physcomitrium patens HOM05D000677 ORTHO05D000727 2.4e-09 65.1 50 54.0
SMO122G0017 Selaginella moellendorffii HOM05D000677 ORTHO05D014201 2.4e-09 65.1 50 58.0
Mapoly0014s0160 Marchantia polymorpha HOM05D000677 ORTHO05D000727 2.0e-08 62.0 82 41.5
SMO146G0081 Selaginella moellendorffii HOM05D000677 ORTHO05D014201 2.7e-08 61.6 50 54.0
unitig_62.g23944 Utricularia gibba HOM05D000677 ORTHO05D000727 7.7e-08 60.1 50 54.0
MD07G1029100 Malus domestica HOM05D000677 ORTHO05D000727 1.0e-07 59.7 46 56.5
SMO077G0008 Selaginella moellendorffii HOM05D000677 ORTHO05D014201 1.3e-07 59.3 50 54.0
TWI38G1249 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 1.5e-06 55.8 68 45.6


User provided reference genes

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