Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 1.5e-198 696.0 362 100.0
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 3.8e-69 266.2 470 43.8
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 9.3e-60 235.0 203 69.0
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 2.5e-52 210.3 202 62.4
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 9.4e-52 208.4 203 61.1
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 5.9e-46 189.1 200 57.5
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 6.5e-45 185.7 204 55.9
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 2.5e-44 183.7 209 56.0
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 2.5e-44 183.7 202 55.4
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 3.2e-44 183.3 203 56.7
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 3.2e-44 183.3 200 56.5
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 4.2e-44 183.0 202 54.5
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 7.2e-44 182.2 200 53.5
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 9.4e-44 181.8 209 56.0
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 1.2e-43 181.4 203 56.2
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.2e-43 181.4 203 56.2
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 1.2e-43 181.4 223 52.5
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 2.1e-43 180.6 225 51.1
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 2.7e-43 180.3 200 54.0
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 3.6e-43 179.9 203 52.7
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 6.1e-43 179.1 200 55.5
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 6.1e-43 179.1 200 55.5
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 8.0e-43 178.7 200 55.0
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 8.0e-43 178.7 225 50.7
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 8.0e-43 178.7 200 56.5
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.4e-42 177.9 203 53.7
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.8e-42 177.6 203 54.2
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 1.8e-42 177.6 200 53.0
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 2.3e-42 177.2 201 53.7
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 3.0e-42 176.8 200 54.5
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 3.0e-42 176.8 200 55.0
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 3.9e-42 176.4 200 52.0
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 2.6e-41 173.7 228 50.9
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 3.3e-41 173.3 202 53.0
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 4.4e-41 172.9 200 52.0
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 5.7e-41 172.6 203 53.7
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 5.7e-41 172.6 200 54.5
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 7.4e-41 172.2 200 53.0
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 2.2e-40 170.6 205 49.8
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 2.8e-40 170.2 197 53.8
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 2.8e-40 170.2 197 53.8
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 2.8e-40 170.2 197 53.8
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 2.8e-40 170.2 197 52.8
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 2.8e-40 170.2 205 49.3
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 2.8e-40 170.2 203 51.2
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 2.8e-40 170.2 200 54.0
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 3.7e-40 169.9 203 52.7
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 3.7e-40 169.9 200 54.0
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 4.8e-40 169.5 197 52.8
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 6.3e-40 169.1 205 50.2
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 8.2e-40 168.7 197 52.8
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 1.1e-39 168.3 204 51.5
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.1e-39 168.3 200 52.0
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 1.1e-39 168.3 200 52.5
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 1.4e-39 167.9 200 53.0
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.4e-39 167.9 203 51.7
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 1.8e-39 167.5 200 51.5
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 1.8e-39 167.5 195 53.8
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 1.8e-39 167.5 203 51.2
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 2.4e-39 167.2 200 51.5
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 3.1e-39 166.8 200 52.0
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 3.1e-39 166.8 199 50.8
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 3.1e-39 166.8 197 53.3
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 3.1e-39 166.8 197 53.3
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 3.1e-39 166.8 200 53.0
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 3.1e-39 166.8 222 49.5
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 3.1e-39 166.8 200 51.5
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 3.1e-39 166.8 200 52.5
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 4.1e-39 166.4 200 51.5
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 4.1e-39 166.4 195 53.3
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 5.3e-39 166.0 197 53.3
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 5.3e-39 166.0 203 51.7
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 7.0e-39 165.6 201 52.7
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 9.1e-39 165.2 203 52.7
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 2.0e-38 164.1 199 51.3
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 4.5e-38 162.9 200 50.0
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 4.5e-38 162.9 200 52.0
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 4.5e-38 162.9 173 59.5
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 4.5e-38 162.9 196 52.6
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 1.0e-37 161.8 200 50.5
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.0e-37 161.8 205 48.8
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 1.0e-37 161.8 200 50.0
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 2.2e-37 160.6 199 49.2
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 3.8e-37 159.8 198 49.5
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 3.8e-37 159.8 199 48.2
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 1.5e-36 157.9 196 49.5
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 1.5e-36 157.9 201 49.3
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 2.5e-36 157.1 162 59.9
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 5.5e-36 156.0 191 50.3
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 2.1e-35 154.1 195 50.3
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 3.0e-34 150.2 196 46.9
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 3.0e-34 150.2 245 43.3
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 4.0e-34 149.8 178 53.4
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 6.7e-34 149.1 235 43.8
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 2.6e-33 147.1 205 45.4
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 3.3e-33 146.7 201 46.3
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 1.3e-32 144.8 198 46.5
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 2.4e-31 140.6 234 41.0
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 1.6e-30 137.9 200 47.5
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 1.1e-28 131.7 195 44.1
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 4.2e-28 129.8 75 85.3
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 4.7e-27 126.3 148 51.4
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 1.4e-26 124.8 165 47.3
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 3.0e-26 123.6 73 83.6
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 1.5e-25 121.3 165 47.9
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 7.0e-23 112.5 207 37.7
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 1.6e-22 111.3 201 38.3
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 2.0e-22 110.9 63 85.7
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 1.0e-21 108.6 204 37.3
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 1.3e-21 108.2 92 64.1
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 1.1e-20 105.1 73 72.6
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 2.5e-20 104.0 202 35.6
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 9.5e-20 102.1 199 39.2
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 8.0e-19 99.0 62 79.0
Cfa001138 Carpinus fangiana HOM05D000398 ORTHO05D000551 1.2e-17 95.1 55 83.6
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 4.9e-16 89.7 59 72.9
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 5.0e-13 79.7 182 34.6
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 8.6e-13 79.0 156 39.1
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 5.6e-12 76.3 202 34.7
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 3.4e-09 67.0 120 41.7
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 5.8e-09 66.2 69 47.8
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 9.8e-09 65.5 57 57.9
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 1.9e-07 61.2 63 54.0
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 7.8e-06 55.8 53 52.8


User provided reference genes

Program Settings