Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05197 Corylus avellana HOM05D013779 ORTHO05D014576 7.5e-74 280.4 139 100.0
Cfa001154 Carpinus fangiana HOM05D013779 ORTHO05D014576 6.6e-38 161.0 90 90.0
QL11p011002 Quercus lobata HOM05D000039 ORTHO05D005263 2.9e-25 119.0 143 55.9
CiPaw.10G107800 Carya illinoinensis HOM05D009618 ORTHO05D014576 8.4e-25 117.5 124 59.7
CiPaw.09G139800 Carya illinoinensis HOM05D009618 ORTHO05D012187 2.7e-23 112.5 122 55.7
Potri.001G075201 Populus trichocarpa HOM05D009618 ORTHO05D012187 2.7e-15 85.9 117 46.2
Potri.003G156000 Populus trichocarpa HOM05D013779 ORTHO05D014576 1.0e-14 84.0 116 43.1
RcHm_v2.0_Chr5g0021721 Rosa chinensis HOM05D013779 ORTHO05D014576 9.0e-11 70.9 111 40.5
VMungo1309G1760 Vigna mungo HOM05D009618 ORTHO05D012187 2.0e-10 69.7 123 41.5
Lalb_Chr07g0188171 Lupinus albus HOM05D009618 ORTHO05D012187 2.6e-10 69.3 105 43.8
Manes.03G072000 Manihot esculenta HOM05D009618 ORTHO05D012187 2.6e-10 69.3 116 43.1
Dinv01136 Davidia involucrata HOM05D009618 ORTHO05D014576 3.4e-10 68.9 130 38.5
Phvul.009G244400 Phaseolus vulgaris HOM05D009618 ORTHO05D012187 1.3e-09 67.0 76 48.7
Glyma.05G134700 Glycine max HOM05D009618 ORTHO05D012187 1.7e-09 66.6 120 40.8
Lalb_Chr18g0051961 Lupinus albus HOM05D009618 ORTHO05D012187 1.7e-09 66.6 126 40.5
Glyma.15G155800 Glycine max HOM05D009618 ORTHO05D012187 2.2e-09 66.2 128 39.1
Sabra01G0053800 Salix brachista HOM05D009618 ORTHO05D012187 1.1e-08 63.9 63 52.4
Glyma.08G089800 Glycine max HOM05D009618 ORTHO05D012187 1.4e-08 63.5 113 37.2
Glyma.09G048500 Glycine max HOM05D009618 ORTHO05D012187 2.4e-08 62.8 127 42.5
FvH4_3g13250 Fragaria vesca HOM05D013779 ORTHO05D014576 1.2e-07 60.5 121 37.2
FAN11G1659 Fragaria x ananassa HOM05D013779 ORTHO05D014576 1.2e-07 60.5 121 37.2
FAN16G0214 Fragaria x ananassa HOM05D013779 ORTHO05D014576 2.1e-07 59.7 121 37.2
FAN21G2791 Fragaria x ananassa HOM05D013779 ORTHO05D014576 3.5e-07 58.9 121 37.2
Phvul.002G187400 Phaseolus vulgaris HOM05D009618 ORTHO05D012187 4.6e-07 58.5 114 38.6
VMungo0251G3538 Vigna mungo HOM05D009618 ORTHO05D012187 4.6e-07 58.5 115 39.1
FAN25G3627 Fragaria x ananassa HOM05D013779 ORTHO05D014576 1.0e-06 57.4 121 36.4
TAR624G1031 Trochodendron aralioides HOM05D013779 ORTHO05D014576 1.0e-06 57.4 111 36.9
TWI38G1398 Tripterygium wilfordii HOM05D009618 ORTHO05D012187 1.3e-06 57.0 31 80.6
Thecc.02G001900 Theobroma cacao HOM05D009618 ORTHO05D012187 8.7e-06 54.3 45 57.8


User provided reference genes

Program Settings