Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 2.4e-154 548.9 294 100.0
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 3.1e-77 292.7 168 93.5
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 6.0e-57 225.3 174 75.9
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 3.9e-40 169.5 140 71.4
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 5.1e-40 169.1 165 60.6
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 1.9e-39 167.2 165 61.2
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 6.3e-38 162.2 166 60.8
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 6.3e-38 162.2 166 60.8
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 8.2e-38 161.8 166 57.2
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 1.8e-37 160.6 162 56.2
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 2.4e-37 160.2 166 60.2
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 3.1e-37 159.8 173 57.8
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 3.1e-37 159.8 166 59.0
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 6.9e-37 158.7 165 58.2
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 6.9e-37 158.7 163 58.9
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.2e-36 157.9 163 58.3
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 1.5e-36 157.5 167 58.7
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 2.6e-36 156.8 162 55.6
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 2.6e-36 156.8 169 58.0
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 3.4e-36 156.4 166 57.8
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 7.6e-36 155.2 165 57.0
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 1.7e-35 154.1 164 57.3
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.2e-35 153.7 165 55.8
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 2.2e-35 153.7 165 55.2
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.9e-35 153.3 165 53.3
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 1.4e-34 151.0 165 52.7
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.9e-34 150.6 164 57.3
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 2.5e-34 150.2 163 56.4
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 4.2e-34 149.4 167 56.3
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 4.2e-34 149.4 178 53.4
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 5.5e-34 149.1 166 56.0
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 1.2e-33 147.9 162 55.6
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.6e-33 147.5 165 53.9
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 1.6e-33 147.5 170 54.7
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 2.7e-33 146.7 161 56.5
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 4.6e-33 146.0 161 55.9
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 7.9e-33 145.2 197 49.2
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 1.0e-32 144.8 163 54.6
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 1.8e-32 144.1 172 55.2
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 2.3e-32 143.7 158 56.3
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 2.3e-32 143.7 134 63.4
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 2.3e-32 143.7 178 52.2
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 2.3e-32 143.7 135 62.2
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 3.0e-32 143.3 167 52.1
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 5.1e-32 142.5 161 54.0
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 5.1e-32 142.5 166 54.8
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 1.5e-31 141.0 164 54.3
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 3.3e-31 139.8 133 61.7
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 4.3e-31 139.4 134 61.9
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 5.7e-31 139.0 163 50.9
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 5.7e-31 139.0 174 51.1
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 7.4e-31 138.7 163 52.8
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 7.4e-31 138.7 161 54.0
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 9.7e-31 138.3 166 54.2
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 9.7e-31 138.3 161 55.3
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.8e-30 136.7 163 52.1
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 3.7e-30 136.3 162 50.6
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 3.7e-30 136.3 165 53.9
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 3.7e-30 136.3 161 53.4
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 4.8e-30 136.0 163 52.8
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 4.8e-30 136.0 163 52.8
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 6.3e-30 135.6 163 53.4
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 6.3e-30 135.6 160 52.5
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 3.1e-29 133.3 162 50.6
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 1.2e-28 131.3 165 49.7
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 2.6e-28 130.2 177 52.0
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 3.4e-28 129.8 161 54.0
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 3.4e-28 129.8 162 49.4
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.4e-28 129.8 162 49.4
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 3.4e-28 129.8 133 57.1
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 3.4e-28 129.8 172 49.4
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 4.5e-28 129.4 163 50.3
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 4.5e-28 129.4 167 49.7
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 4.5e-28 129.4 167 51.5
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 5.9e-28 129.0 162 52.5
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 7.7e-28 128.6 133 56.4
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 7.7e-28 128.6 163 50.3
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.0e-27 128.3 171 50.3
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.3e-27 127.9 163 50.3
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 1.7e-27 127.5 163 49.7
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 1.7e-27 127.5 163 49.7
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 1.7e-27 127.5 164 50.6
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 1.7e-27 127.5 167 50.9
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 2.2e-27 127.1 167 50.9
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 6.5e-27 125.6 163 49.1
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 8.5e-27 125.2 162 48.1
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 8.5e-27 125.2 162 48.1
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 8.5e-27 125.2 162 48.1
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.1e-26 124.8 127 61.4
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.4e-26 124.4 163 47.2
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 2.5e-26 123.6 168 48.2
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.2e-25 121.3 161 49.7
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 3.6e-25 119.8 161 49.1
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 1.0e-24 118.2 162 48.8
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 1.4e-24 117.9 155 49.7
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 1.1e-23 114.8 162 49.4
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 7.4e-23 112.1 75 72.0
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.8e-21 107.5 161 45.3
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 5.3e-21 105.9 68 73.5
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 2.6e-20 103.6 162 46.9
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 5.0e-19 99.4 166 42.8
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 6.5e-19 99.0 161 43.5
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 2.5e-18 97.1 121 52.9
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 5.5e-18 95.9 133 51.9
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 9.4e-18 95.1 160 41.2
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 6.7e-16 89.0 119 52.1
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 4.4e-15 86.3 122 48.4
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 5.7e-15 85.9 136 42.6
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 6.3e-14 82.4 49 79.6
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 1.9e-10 70.9 42 81.0
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 2.5e-10 70.5 42 76.2
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 6.1e-09 65.9 42 71.4
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 8.0e-09 65.5 125 41.6
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 2.8e-06 57.0 42 69.0


User provided reference genes

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