Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05106 Corylus avellana HOM05D008942 ORTHO05D009202 2.2e-46 189.1 134 100.0
Cfa004866 Carpinus fangiana HOM05D008942 ORTHO05D009202 1.4e-32 143.3 148 80.4
QL12p033964 Quercus lobata HOM05D008942 ORTHO05D009202 1.6e-17 93.2 96 59.4
QL12p034826 Quercus lobata HOM05D008942 ORTHO05D009202 2.8e-17 92.4 96 60.4
Potri.002G190700 Populus trichocarpa HOM05D008942 ORTHO05D009202 1.9e-10 69.7 108 45.4
CiPaw.07G122100 Carya illinoinensis HOM05D008942 ORTHO05D009202 9.6e-10 67.4 108 47.2
Sabra02G0164800 Salix brachista HOM05D008942 ORTHO05D009202 2.1e-09 66.2 107 43.0
Potri.014G115800 Populus trichocarpa HOM05D008942 ORTHO05D009202 6.2e-09 64.7 109 44.0
QL12p033984 Quercus lobata HOM05D008942 ORTHO05D009202 6.2e-09 64.7 105 44.8
CiPaw.08G152800 Carya illinoinensis HOM05D009264 ORTHO05D009202 1.8e-08 63.2 102 44.1
Manes.01G232300 Manihot esculenta HOM05D008942 ORTHO05D009202 1.8e-08 63.2 100 44.0
Thecc.01G321000 Theobroma cacao HOM05D008942 ORTHO05D009202 1.8e-08 63.2 96 43.8
CiPaw.07G122200 Carya illinoinensis HOM05D008942 ORTHO05D009202 1.2e-07 60.5 106 45.3
CiPaw.08G085100 Carya illinoinensis HOM05D008942 ORTHO05D009202 2.6e-07 59.3 114 42.1
Manes.01G232200 Manihot esculenta HOM05D008942 ORTHO05D009202 4.4e-07 58.5 100 44.0
Sabra14G0085900 Salix brachista HOM05D008942 ORTHO05D009202 4.4e-07 58.5 107 42.1
Ciclev10013538m.g Citrus clementina HOM05D009264 ORTHO05D009202 1.3e-06 57.0 111 40.5
Atru.chr5.920 Acer truncatum HOM05D008942 ORTHO05D009202 2.9e-06 55.8 109 37.6
TPR.G3019 Trifolium pratense HOM05D008942 ORTHO05D009202 6.4e-06 54.7 100 41.0


User provided reference genes

Program Settings