Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 6.9e-41 170.2 88 100.0
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 2.1e-34 148.7 88 88.6
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 1.5e-32 142.5 88 84.1
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 9.3e-30 133.3 86 80.2
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 1.8e-25 119.0 82 78.0
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 1.8e-25 119.0 83 77.1
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 2.4e-25 118.6 84 81.0
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 1.2e-24 116.3 80 75.0
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 2.0e-24 115.5 84 70.2
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 5.8e-24 114.0 81 74.1
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 5.8e-24 114.0 84 72.6
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 7.6e-24 113.6 82 75.6
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 7.6e-24 113.6 89 71.9
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 4.9e-23 110.9 84 73.8
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 1.1e-22 109.8 83 69.9
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 1.4e-22 109.4 84 71.4
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 3.2e-22 108.2 83 68.7
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 3.2e-22 108.2 82 73.2
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 5.5e-22 107.5 78 70.5
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 7.1e-22 107.1 86 69.8
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 1.6e-21 105.9 84 66.7
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 2.1e-21 105.5 79 70.9
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 2.7e-21 105.1 80 72.5
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 3.5e-21 104.8 81 69.1
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 4.6e-21 104.4 81 69.1
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 4.6e-21 104.4 82 70.7
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 6.1e-21 104.0 86 68.6
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 6.1e-21 104.0 85 68.2
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 1.0e-20 103.2 65 78.5
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 1.0e-20 103.2 90 66.7
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 1.0e-20 103.2 82 68.3
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 1.8e-20 102.4 79 67.1
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 1.8e-20 102.4 80 68.8
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 2.3e-20 102.1 84 65.5
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 3.0e-20 101.7 78 69.2
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 5.1e-20 100.9 83 65.1
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 6.7e-20 100.5 82 69.5
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 6.7e-20 100.5 83 66.3
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 8.7e-20 100.1 78 66.7
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 1.5e-19 99.4 76 69.7
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 1.5e-19 99.4 76 69.7
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 1.9e-19 99.0 83 66.3
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 3.3e-19 98.2 85 67.1
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 3.3e-19 98.2 84 67.9
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 3.3e-19 98.2 84 67.9
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 3.3e-19 98.2 78 66.7
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 5.7e-19 97.4 82 69.5
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 1.3e-18 96.3 82 68.3
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 1.3e-18 96.3 84 66.7
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 1.6e-18 95.9 81 70.4
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 2.2e-18 95.5 82 68.3
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.2e-18 95.5 82 68.3
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 2.8e-18 95.1 73 69.9
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 2.8e-18 95.1 84 63.1
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 2.8e-18 95.1 86 66.3
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 1.4e-17 92.8 84 65.5
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 6.9e-17 90.5 78 64.1
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 2.0e-16 89.0 79 62.0
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 7.7e-16 87.0 81 63.0
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 1.0e-15 86.7 63 76.2
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 1.3e-15 86.3 77 59.7
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 2.2e-15 85.5 89 55.1
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 2.9e-15 85.1 62 66.1
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 2.9e-15 85.1 88 58.0
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 2.9e-15 85.1 84 59.5
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 6.5e-15 84.0 76 57.9
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 8.5e-15 83.6 78 59.0
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 8.5e-15 83.6 69 55.1
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 1.9e-14 82.4 82 59.8
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 2.5e-14 82.0 78 56.4
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 3.2e-14 81.6 91 52.7
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 4.2e-14 81.3 89 56.2
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 5.5e-14 80.9 76 60.5
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 1.6e-13 79.3 80 53.8
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 3.6e-13 78.2 68 63.2
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 3.6e-13 78.2 75 54.7
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 6.1e-13 77.4 76 60.5
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 1.4e-12 76.3 82 57.3
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 2.3e-12 75.5 74 56.8
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 3.0e-12 75.1 82 57.3
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 6.7e-12 73.9 58 69.0
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 8.8e-12 73.6 82 48.8
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 1.5e-11 72.8 82 56.1
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 2.5e-11 72.0 87 52.9
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 3.3e-11 71.6 79 50.6
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 3.3e-11 71.6 80 51.2
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 4.3e-11 71.2 59 64.4
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 5.7e-11 70.9 76 57.9
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 1.7e-10 69.3 77 59.7
Carub.0001s3677 Capsella rubella HOM05D007627 ORTHO05D009640 3.7e-10 68.2 85 54.1
SHI28956 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-09 66.6 69 47.8
AL1G54240 Arabidopsis lyrata HOM05D007627 ORTHO05D009640 1.8e-09 65.9 84 51.2
Carub.0001s3693 Capsella rubella HOM05D007627 ORTHO05D009640 1.2e-08 63.2 84 50.0
AT1G47820 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 1.5e-08 62.8 85 51.8
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 2.6e-08 62.0 84 51.2
ATR0414G001 Amborella trichopoda HOM05D007627 ORTHO05D009640 7.7e-08 60.5 67 46.3
Carub.0001s3680 Capsella rubella HOM05D007627 ORTHO05D009640 7.7e-08 60.5 86 48.8


User provided reference genes

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