Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 1.3e-90 336.3 162 100.0
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 2.9e-37 159.1 103 74.8
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 1.5e-33 146.7 103 69.9
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 3.7e-32 142.1 103 67.0
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 4.8e-32 141.7 103 66.0
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 2.4e-31 139.4 105 61.9
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 3.1e-31 139.0 103 57.3
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 3.1e-31 139.0 108 58.3
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 4.1e-31 138.7 105 62.9
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 5.3e-31 138.3 105 61.9
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 5.3e-31 138.3 103 63.1
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 7.0e-31 137.9 103 57.3
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 1.6e-30 136.7 103 62.1
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 2.0e-30 136.3 105 59.0
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 3.5e-30 135.6 102 63.7
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 7.7e-30 134.4 101 62.4
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 1.3e-29 133.7 111 63.1
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 2.2e-29 132.9 105 60.0
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 3.8e-29 132.1 105 57.1
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 6.5e-29 131.3 104 56.7
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 1.1e-28 130.6 105 59.0
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 1.9e-28 129.8 104 55.8
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 2.5e-28 129.4 105 57.1
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 2.5e-28 129.4 103 59.2
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 4.2e-28 128.6 105 55.2
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 7.2e-28 127.9 103 59.2
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 1.6e-27 126.7 105 53.3
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 1.6e-27 126.7 105 53.3
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 2.1e-27 126.3 103 57.3
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 3.6e-27 125.6 103 58.3
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 6.1e-27 124.8 108 56.5
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 6.1e-27 124.8 105 53.3
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 8.0e-27 124.4 105 55.2
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 1.4e-26 123.6 103 57.3
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 2.3e-26 122.9 105 52.4
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 4.0e-26 122.1 103 55.3
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 8.8e-26 120.9 105 52.4
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 1.1e-25 120.6 105 51.4
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 1.1e-25 120.6 100 59.0
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 1.1e-25 120.6 105 53.3
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 1.5e-25 120.2 105 52.4
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 1.5e-25 120.2 105 52.4
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 1.5e-25 120.2 105 51.4
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 1.5e-25 120.2 113 49.6
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 2.0e-25 119.8 100 58.0
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 2.6e-25 119.4 105 53.3
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 3.3e-25 119.0 103 56.3
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 4.4e-25 118.6 105 51.4
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 7.5e-25 117.9 105 54.3
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 7.5e-25 117.9 105 54.3
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 7.5e-25 117.9 105 51.4
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 9.7e-25 117.5 105 52.4
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 1.3e-24 117.1 105 52.4
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 2.2e-24 116.3 105 52.4
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 4.8e-24 115.2 106 54.7
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 6.3e-24 114.8 105 50.5
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 6.3e-24 114.8 103 54.4
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 1.1e-23 114.0 100 55.0
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 1.1e-23 114.0 101 54.5
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 1.8e-23 113.2 103 51.5
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 2.4e-23 112.8 103 51.5
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 4.1e-23 112.1 103 51.5
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 7.0e-23 111.3 103 52.4
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 1.6e-22 110.2 103 53.4
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 5.9e-22 108.2 97 50.5
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 1.7e-21 106.7 103 49.5
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 2.2e-21 106.3 105 47.6
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 2.9e-21 105.9 101 48.5
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 5.0e-21 105.1 103 50.5
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 6.5e-21 104.8 108 47.2
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 7.2e-20 101.3 89 56.2
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 2.3e-18 96.3 106 45.3
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 3.0e-18 95.9 102 47.1
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 6.8e-18 94.7 106 47.2
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 1.2e-17 94.0 80 60.0
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.5e-17 93.6 106 45.3
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 3.4e-17 92.4 70 65.7
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 3.4e-17 92.4 95 43.2
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 4.4e-17 92.0 53 83.0
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 9.8e-17 90.9 81 48.1
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 2.0e-14 83.2 84 44.0
SHI15147 Sapria himalayana HOM05D007613 ORTHO05D009344 1.7e-13 80.1 96 46.9
SalBow3G3757 Salvia bowleyana HOM05D007613 ORTHO05D009344 5.5e-12 75.1 78 46.2
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 1.6e-11 73.6 94 37.2
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 1.6e-11 73.6 131 34.4
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 2.1e-11 73.2 94 39.4
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 1.3e-08 63.9 38 57.9
Gohir.A12G130300 Gossypium hirsutum HOM05D007613 ORTHO05D009344 3.7e-08 62.4 40 67.5
AUR62033103 Chenopodium quinoa HOM05D007613 ORTHO05D009344 6.3e-08 61.6 47 57.4
unitig_0.g668 Utricularia gibba HOM05D007613 ORTHO05D009344 2.4e-07 59.7 35 71.4
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 9.2e-07 57.8 38 57.9


User provided reference genes

Program Settings