Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 3.5e-252 874.4 416 100.0
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 1.4e-221 772.7 417 91.1
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 5.3e-192 674.5 426 77.5
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 2.6e-183 645.6 420 76.0
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 3.6e-180 635.2 426 74.4
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 9.1e-176 620.5 420 71.7
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 2.0e-175 619.4 420 70.7
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 2.9e-174 615.5 419 72.3
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 1.9e-173 612.8 420 70.5
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 4.0e-171 605.1 420 70.0
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 1.1e-170 603.6 421 69.4
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 2.8e-169 599.0 425 69.4
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 1.4e-168 596.7 422 69.0
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 7.0e-168 594.3 420 69.3
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 1.2e-167 593.6 420 69.0
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 5.9e-167 591.3 420 69.5
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.0e-166 590.5 424 67.9
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 1.0e-166 590.5 421 68.2
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 1.7e-166 589.7 425 68.5
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 3.8e-166 588.6 411 67.9
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 3.8e-166 588.6 411 67.9
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 3.8e-166 588.6 421 67.9
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 5.0e-166 588.2 424 67.7
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.1e-165 587.0 425 67.3
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 7.2e-165 584.3 424 67.7
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 1.6e-164 583.2 419 68.0
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 4.7e-164 581.6 420 67.6
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 2.3e-163 579.3 424 67.7
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 4.0e-163 578.6 416 67.1
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 5.2e-163 578.2 423 66.0
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 5.2e-163 578.2 423 65.7
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 1.5e-162 576.6 422 67.1
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 2.6e-162 575.9 426 66.7
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.3e-161 573.5 421 66.3
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 2.2e-161 572.8 421 68.2
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 8.3e-161 570.9 426 66.4
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 2.7e-159 565.8 420 66.9
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 7.7e-159 564.3 416 65.6
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 1.7e-158 563.1 474 60.8
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 1.7e-158 563.1 422 65.2
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 8.5e-158 560.8 420 66.9
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 8.5e-158 560.8 424 63.9
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 5.5e-157 558.1 422 65.6
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 1.4e-155 553.5 418 66.0
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 2.3e-155 552.7 371 73.6
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 2.0e-154 549.7 415 63.9
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.4e-154 548.9 420 65.2
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 4.4e-154 548.5 372 70.2
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 5.7e-154 548.1 415 64.1
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 1.7e-153 546.6 421 64.4
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 4.9e-153 545.0 425 63.1
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 8.3e-153 544.3 422 63.0
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 8.3e-153 544.3 422 63.3
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 1.4e-152 543.5 415 63.6
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 3.1e-152 542.3 421 63.9
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 9.2e-152 540.8 422 62.6
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 9.2e-152 540.8 418 63.9
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 6.6e-150 534.6 422 63.7
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 1.5e-149 533.5 423 62.4
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 1.5e-149 533.5 449 61.5
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 5.6e-149 531.6 410 65.4
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 9.5e-149 530.8 432 63.0
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 6.1e-148 528.1 416 62.3
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 1.8e-147 526.6 419 63.7
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 2.3e-147 526.2 422 63.7
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 3.0e-147 525.8 427 60.9
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 1.3e-145 520.4 417 61.9
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 6.4e-145 518.1 406 63.1
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.8e-144 516.5 420 61.4
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 4.1e-144 515.4 473 56.2
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 4.1e-144 515.4 347 71.2
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 7.0e-144 514.6 423 61.2
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 1.2e-143 513.8 422 60.7
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 1.9e-141 506.5 425 59.5
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 5.6e-141 505.0 417 61.9
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 6.2e-140 501.5 398 62.6
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 1.0e-139 500.7 424 60.8
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 1.0e-139 500.7 422 59.2
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 2.3e-139 499.6 418 59.1
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 7.5e-138 494.6 417 57.8
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 7.5e-138 494.6 420 59.0
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 1.7e-137 493.4 422 58.5
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 2.2e-137 493.0 421 58.7
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 4.9e-137 491.9 421 59.1
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 8.3e-137 491.1 424 59.9
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 2.4e-136 489.6 372 62.6
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 3.2e-136 489.2 421 58.9
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 7.0e-136 488.0 422 60.2
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 7.0e-136 488.0 428 56.8
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 1.6e-135 486.9 419 59.4
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 3.0e-134 482.6 438 56.6
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 5.6e-133 478.4 418 57.2
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 5.6e-133 478.4 417 59.2
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 2.1e-132 476.5 419 58.5
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.6e-132 475.7 420 59.0
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 1.8e-131 473.4 417 58.0
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 6.8e-131 471.5 418 58.6
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 6.8e-131 471.5 458 55.7
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 1.5e-130 470.3 417 57.6
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 4.4e-130 468.8 450 54.4
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 5.8e-130 468.4 419 58.5
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 2.5e-125 453.0 410 54.4
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 4.7e-124 448.7 416 55.3
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 3.4e-122 442.6 371 60.9
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 4.7e-116 422.2 411 52.1
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 8.9e-115 417.9 332 60.5
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 2.9e-113 412.9 299 69.2
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 2.8e-108 396.4 304 66.1
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 8.7e-102 374.8 264 69.3
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 4.6e-87 325.9 306 54.2
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.8e-86 323.9 415 43.4
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 3.3e-85 319.7 416 43.0
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 1.5e-82 310.8 408 41.4
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 5.0e-81 305.8 374 44.1
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 1.0e-78 298.1 229 63.3
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.0e-73 281.6 297 49.5
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 7.9e-71 271.9 329 44.1
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 1.4e-67 261.2 347 43.5
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 5.0e-65 252.7 172 73.3
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 2.3e-62 243.8 234 49.6
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 9.1e-59 231.9 264 43.9
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 2.7e-55 220.3 152 67.8
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 9.7e-53 211.8 190 55.8
RcHm_v2.0_Chr6g0293751 Rosa chinensis HOM05D005667 ORTHO05D007299 2.5e-48 197.2 139 72.7
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 3.6e-47 193.4 384 33.3
BcaC02g06993 Brassica carinata HOM05D005667 ORTHO05D007299 3.2e-40 170.2 123 69.9
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 5.0e-33 146.4 370 30.5
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 3.6e-31 140.2 177 45.2
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 6.4e-28 129.4 148 45.3
PRCOL_00003266 Prasinoderma coloniale HOM05D005667 ORTHO05D007299 1.4e-27 128.3 353 29.5
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-15 87.8 137 35.0
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 6.2e-15 86.3 201 30.3
Prupe.8G259600 Prunus persica HOM05D005667 ORTHO05D007299 9.9e-13 79.0 45 88.9
Actinidia13473 Actinidia chinensis HOM05D005667 ORTHO05D000474 2.1e-07 61.2 68 48.5
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-06 58.9 100 33.0


User provided reference genes

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