Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04840 Corylus avellana HOM05D002630 ORTHO05D000952 2.8e-143 511.9 258 100.0
Haze_23644 Corylus avellana HOM05D002630 ORTHO05D000952 3.5e-117 425.2 258 84.5
Haze_04815 Corylus avellana HOM05D002630 ORTHO05D000952 1.2e-112 410.2 265 80.4
Haze_04835 Corylus avellana HOM05D005315 ORTHO05D006589 3.7e-111 405.2 213 94.8
Haze_04170 Corylus avellana HOM05D002630 ORTHO05D000952 1.7e-108 396.4 264 78.0
Cfa006013 Carpinus fangiana HOM05D005315 ORTHO05D006589 1.2e-69 267.3 268 60.1
Haze_04841 Corylus avellana HOM05D002630 ORTHO05D000952 4.3e-59 232.3 131 86.3
QL12p024328 Quercus lobata HOM05D002630 ORTHO05D000952 6.3e-26 122.1 197 42.6
CiPaw.07G101500 Carya illinoinensis HOM05D002630 ORTHO05D000952 1.1e-25 121.3 175 42.3
CiPaw.07G072700 Carya illinoinensis HOM05D002630 ORTHO05D000952 1.6e-24 117.5 175 40.6
CiPaw.07G101400 Carya illinoinensis HOM05D002630 ORTHO05D000952 1.7e-23 114.0 201 36.8
Ciclev10013622m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.9e-22 110.5 187 38.5
Prupe.4G151900 Prunus persica HOM05D002630 ORTHO05D000952 3.0e-20 103.2 208 36.1
Prupe.4G154000 Prunus persica HOM05D002630 ORTHO05D000952 3.0e-20 103.2 189 36.0
FAN17G1202 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.5e-19 100.9 185 33.0
Prupe.4G153700 Prunus persica HOM05D002630 ORTHO05D000952 3.3e-19 99.8 189 34.9
RcHm_v2.0_Chr5g0056721 Rosa chinensis HOM05D002630 ORTHO05D000952 7.5e-19 98.6 203 36.5
COL.COLO4_33115 Corchorus olitorius HOM05D002630 ORTHO05D000952 1.7e-18 97.4 180 37.2
FAN07G2769 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.2e-18 97.1 184 33.2
Ciclev10013691m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.8e-18 96.7 200 35.0
Ciclev10013879m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.8e-18 96.7 200 35.0
Thecc.10G132400 Theobroma cacao HOM05D002630 ORTHO05D000952 4.8e-18 95.9 145 37.9
FvH4_4g12410 Fragaria vesca HOM05D002630 ORTHO05D000952 6.3e-18 95.5 184 33.2
FAN12G0860 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.2e-18 95.1 184 33.2
FAN12G3767 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.2e-18 95.1 184 33.2
Prupe.3G065000 Prunus persica HOM05D002630 ORTHO05D000952 1.4e-17 94.4 190 35.8
FvH4_3g18930 Fragaria vesca HOM05D002630 ORTHO05D000952 2.4e-17 93.6 182 36.3
FAN14G5613 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.4e-17 93.6 193 34.2
Lj5g0002813 Lotus japonicus HOM05D002630 ORTHO05D000952 2.4e-17 93.6 206 32.0
FvH4_6g39600 Fragaria vesca HOM05D002630 ORTHO05D000952 3.1e-17 93.2 193 34.2
Lalb_Chr02g0155901 Lupinus albus HOM05D002630 ORTHO05D000952 3.1e-17 93.2 159 34.6
Lalb_Chr02g0156011 Lupinus albus HOM05D002630 ORTHO05D000952 3.1e-17 93.2 159 34.6
Lalb_Chr06g0171691 Lupinus albus HOM05D002630 ORTHO05D000952 4.1e-17 92.8 149 36.2
Thecc.10G133400 Theobroma cacao HOM05D002630 ORTHO05D000952 4.1e-17 92.8 178 33.1
Thecc.10G134900 Theobroma cacao HOM05D002630 ORTHO05D000952 4.1e-17 92.8 162 35.2
Prupe.I005300 Prunus persica HOM05D002630 ORTHO05D000952 5.3e-17 92.4 189 35.4
FvH4_3g18940 Fragaria vesca HOM05D002630 ORTHO05D000952 7.0e-17 92.0 172 36.0
Thecc.10G139400 Theobroma cacao HOM05D002630 ORTHO05D000952 7.0e-17 92.0 178 33.1
FAN05G2222 Fragaria x ananassa HOM05D002630 ORTHO05D000952 9.1e-17 91.7 192 35.4
FAN11G3152 Fragaria x ananassa HOM05D002630 ORTHO05D000952 9.1e-17 91.7 181 35.9
Prupe.4G230900 Prunus persica HOM05D002630 ORTHO05D000952 9.1e-17 91.7 189 34.4
Prupe.4G231000 Prunus persica HOM05D002630 ORTHO05D000952 9.1e-17 91.7 189 34.4
FAN09G4772 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.6e-16 90.9 192 35.9
Lj5g0010861 Lotus japonicus HOM05D002630 ORTHO05D000952 1.6e-16 90.9 184 31.5
Prupe.4G246100 Prunus persica HOM05D002630 ORTHO05D000952 1.6e-16 90.9 189 34.9
FvH4_3g18170 Fragaria vesca HOM05D002630 ORTHO05D000952 2.0e-16 90.5 188 35.6
FvH4_6g39190 Fragaria vesca HOM05D002630 ORTHO05D000952 2.0e-16 90.5 192 35.4
FvH4_6g39200 Fragaria vesca HOM05D002630 ORTHO05D000952 2.0e-16 90.5 192 35.4
FAN05G2844 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.0e-16 90.5 192 35.4
FAN14G2281 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.0e-16 90.5 192 35.4
FAN14G5590 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.0e-16 90.5 192 35.4
FAN25G3033 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.0e-16 90.5 182 36.8
FAN05G0057 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.7e-16 90.1 192 35.4
FAN11G3018 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.7e-16 90.1 172 36.0
FAN25G2891 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.5e-16 89.7 172 34.9
COL.COLO4_18802 Corchorus olitorius HOM05D002630 ORTHO05D000952 4.5e-16 89.4 152 38.2
Atru.chr1.1532 Acer truncatum HOM05D002630 ORTHO05D000952 5.9e-16 89.0 183 35.0
Atru.chr1.394 Acer truncatum HOM05D002630 ORTHO05D000952 5.9e-16 89.0 210 32.4
FAN02G1492 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.9e-16 89.0 209 32.5
FAN21G0380 Fragaria x ananassa HOM05D002630 ORTHO05D000952 7.7e-16 88.6 180 35.0
Atru.chr1.1517 Acer truncatum HOM05D002630 ORTHO05D000952 1.0e-15 88.2 180 33.9
Atru.chr12.1167 Acer truncatum HOM05D002630 ORTHO05D000952 1.0e-15 88.2 182 33.5
arahy.Tifrunner.gnm1.ann1.I4FPAQ Arachis hypogaea HOM05D002630 ORTHO05D000952 1.0e-15 88.2 178 32.6
arahy.Tifrunner.gnm1.ann1.W8FFAE Arachis hypogaea HOM05D002630 ORTHO05D000952 1.0e-15 88.2 178 32.6
FAN02G4413 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.0e-15 88.2 192 34.4
Atru.chr1.1697 Acer truncatum HOM05D002630 ORTHO05D000952 1.3e-15 87.8 180 33.9
FAN11G3586 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.3e-15 87.8 172 35.5
FAN21G3107 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.3e-15 87.8 172 34.9
arahy.Tifrunner.gnm1.ann1.HJ0R1G Arachis hypogaea HOM05D002630 ORTHO05D000952 1.7e-15 87.4 178 32.0
FvH4_3g18460 Fragaria vesca HOM05D002630 ORTHO05D000952 2.2e-15 87.0 172 36.0
FAN11G1828 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.2e-15 87.0 172 36.0
FAN16G0446 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.2e-15 87.0 172 36.0
Atru.chr1.1696 Acer truncatum HOM05D002630 ORTHO05D000952 2.9e-15 86.7 180 33.3
FAN09G2675 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.8e-15 86.3 180 32.2
MD06G1030300 Malus domestica HOM05D002630 ORTHO05D000952 5.0e-15 85.9 186 34.9
TPR.G24281 Trifolium pratense HOM05D002630 ORTHO05D000952 5.0e-15 85.9 140 34.3
Atru.chr5.426 Acer truncatum HOM05D002630 ORTHO05D000952 6.5e-15 85.5 198 31.3
CsaV3_4G025380 Cucumis sativus L. HOM05D002630 ORTHO05D000952 6.5e-15 85.5 189 32.3
FAN21G1107 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.5e-15 85.1 172 33.7
Atru.chr5.431 Acer truncatum HOM05D002630 ORTHO05D000952 1.5e-14 84.3 184 32.1
Medtr1g045470 Medicago truncatula HOM05D002630 ORTHO05D000952 1.5e-14 84.3 166 31.3
QL03p071354 Quercus lobata HOM05D002630 ORTHO05D000952 1.9e-14 84.0 173 31.8
Ciclev10024200m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.5e-14 83.6 135 37.0
Dinv05036 Davidia involucrata HOM05D002630 ORTHO05D000952 2.5e-14 83.6 173 33.5
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 2.5e-14 83.6 165 33.3
FAN21G0085 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.5e-14 82.4 172 33.7
Cfa006016 Carpinus fangiana HOM05D002630 ORTHO05D000952 7.2e-14 82.0 128 46.9
MELO3C030697.2 Cucumis melo HOM05D002630 ORTHO05D000952 7.2e-14 82.0 183 32.8
Atru.chr5.457 Acer truncatum HOM05D001542 ORTHO05D000952 1.2e-13 81.3 192 30.7
MELO3C009980.2 Cucumis melo HOM05D002630 ORTHO05D000952 1.6e-13 80.9 270 29.3
Atru.chr5.447 Acer truncatum HOM05D002630 ORTHO05D000952 2.7e-13 80.1 183 32.2
Ciclev10033536m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.7e-13 80.1 221 31.7
CsaV3_1G044320 Cucumis sativus L. HOM05D002630 ORTHO05D000952 2.7e-13 80.1 183 31.1
QL03p072530 Quercus lobata HOM05D002630 ORTHO05D000952 3.6e-13 79.7 242 26.4
Ciclev10013730m.g Citrus clementina HOM05D002630 ORTHO05D000952 6.1e-13 79.0 191 30.9
Medtr7g116460 Medicago truncatula HOM05D002630 ORTHO05D000952 6.1e-13 79.0 165 32.7
RcHm_v2.0_Chr7g0231191 Rosa chinensis HOM05D002630 ORTHO05D000952 8.0e-13 78.6 221 29.0
TWI75G0791 Tripterygium wilfordii HOM05D002630 ORTHO05D000952 8.0e-13 78.6 205 31.7
Ciclev10026981m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.0e-12 78.2 135 36.3
Ciclev10033719m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.0e-12 78.2 221 32.1
Ciclev10033541m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.4e-12 77.8 199 33.7
Ciclev10013626m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.8e-12 77.4 191 30.4
Ciclev10033957m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.8e-12 77.4 221 31.2
FvH4_5g27620 Fragaria vesca HOM05D002630 ORTHO05D000952 3.0e-12 76.6 188 30.9
FvH4_5g27760 Fragaria vesca HOM05D002630 ORTHO05D000952 3.0e-12 76.6 188 30.9
QL03p072148 Quercus lobata HOM05D002630 ORTHO05D000952 3.0e-12 76.6 170 30.0
Ciclev10033436m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.0e-12 76.3 199 33.7
Ciclev10033459m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.0e-12 76.3 171 34.5
Ciclev10033879m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.0e-12 76.3 198 33.3
Prupe.3G111400 Prunus persica HOM05D002630 ORTHO05D000952 4.0e-12 76.3 178 30.9
FAN13G0580 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.2e-12 75.9 179 31.8
FAN13G1890 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.2e-12 75.9 188 30.9
FAN18G3897 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.2e-12 75.9 188 30.9
Psat6g011840 Pisum sativum HOM05D028744 ORTHO05D000952 5.2e-12 75.9 180 32.8
Prupe.6G133600 Prunus persica HOM05D002630 ORTHO05D000952 5.2e-12 75.9 168 31.5
Prupe.6G134000 Prunus persica HOM05D002630 ORTHO05D000952 5.2e-12 75.9 168 31.5
Ca_04875_v3 Cicer arietinum L. HOM05D002630 ORTHO05D000952 6.8e-12 75.5 159 32.7
Ciclev10033526m.g Citrus clementina HOM05D002630 ORTHO05D000952 6.8e-12 75.5 199 33.7
FAN05G5746 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.8e-12 75.1 173 29.5
FvH4_6g26310 Fragaria vesca HOM05D002630 ORTHO05D000952 1.2e-11 74.7 173 29.5
FAN02G0323 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.2e-11 74.7 173 29.5
FAN09G0542 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.2e-11 74.7 173 29.5
Sed0020443 Sechium edule HOM05D002630 ORTHO05D000952 1.2e-11 74.7 186 29.0
FAN18G0381 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.0e-11 73.9 217 28.6
FvH4_3g17012 Fragaria vesca HOM05D002630 ORTHO05D000952 2.6e-11 73.6 185 29.7
FvH4_5g27470 Fragaria vesca HOM05D002630 ORTHO05D000952 2.6e-11 73.6 155 32.3
FAN11G2272 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.6e-11 73.6 187 30.5
RcHm_v2.0_Chr7g0211251 Rosa chinensis HOM05D002630 ORTHO05D000952 2.6e-11 73.6 192 30.2
RcHm_v2.0_Chr2g0126751 Rosa chinensis HOM05D002630 ORTHO05D000952 5.7e-11 72.4 174 29.3
FvH4_5g25510 Fragaria vesca HOM05D002630 ORTHO05D000952 7.5e-11 72.0 209 29.2
FAN04G3164 Fragaria x ananassa HOM05D002630 ORTHO05D000952 7.5e-11 72.0 188 29.8
QL03p071640 Quercus lobata HOM05D002630 ORTHO05D000952 7.5e-11 72.0 171 30.4
FvH4_5g25360 Fragaria vesca HOM05D002630 ORTHO05D000952 9.8e-11 71.6 191 29.8
FAN13G1016 Fragaria x ananassa HOM05D002630 ORTHO05D000952 9.8e-11 71.6 155 31.0
RcHm_v2.0_Chr6g0271921 Rosa chinensis HOM05D002630 ORTHO05D000952 9.8e-11 71.6 209 29.7
FAN18G3393 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.3e-10 71.2 191 29.8
Medtr1g053575 Medicago truncatula HOM05D002630 ORTHO05D000952 1.3e-10 71.2 169 32.0
Ciclev10023292m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.2e-10 70.5 180 32.8
FAN04G1225 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.2e-10 70.5 192 29.7
FvH4_7g11470 Fragaria vesca HOM05D002630 ORTHO05D000952 2.8e-10 70.1 189 29.6
FAN06G2160 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.8e-10 70.1 189 29.6
FAN06G5033 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.8e-10 70.1 189 29.6
FAN08G2834 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.8e-10 70.1 155 32.3
FAN01G3145 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.7e-10 69.7 181 28.7
FAN03G2513 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.7e-10 69.7 182 30.2
FAN16G2901 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.3e-10 68.9 187 29.4
Sed0024693 Sechium edule HOM05D002630 ORTHO05D000952 6.3e-10 68.9 225 27.1
Prupe.4G255500 Prunus persica HOM05D002630 ORTHO05D000952 8.3e-10 68.6 105 38.1
FAN18G3807 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.8e-09 67.4 186 28.5
FAN08G1554 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.1e-09 66.2 193 29.5
FAN18G2012 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.1e-09 66.2 170 28.8
QL03p071564 Quercus lobata HOM05D002630 ORTHO05D000952 7.0e-09 65.5 171 28.1
RcHm_v2.0_Chr3g0452871 Rosa chinensis HOM05D028547 ORTHO05D000952 1.6e-08 64.3 248 27.8
arahy.Tifrunner.gnm1.ann1.09VTBX Arachis hypogaea HOM05D002630 ORTHO05D000952 2.0e-08 63.9 143 31.5
Cfa013250 Carpinus fangiana HOM05D009365 ORTHO05D000952 3.5e-08 63.2 242 26.4
Actinidia18621 Actinidia chinensis HOM05D007636 ORTHO05D000952 4.5e-08 62.8 186 30.6
FvH4_6g39580 Fragaria vesca HOM05D002630 ORTHO05D000952 5.9e-08 62.4 259 27.0
FAN08G3500 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.9e-08 62.4 269 26.4
FAN14G3453 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.9e-08 62.4 259 27.0
Actinidia18619 Actinidia chinensis HOM05D002630 ORTHO05D000952 7.7e-08 62.0 186 30.6
CsaV3_3G034660 Cucumis sativus L. HOM05D011305 ORTHO05D000952 7.7e-08 62.0 209 29.7
FvH4_3g16910 Fragaria vesca HOM05D002630 ORTHO05D000952 1.3e-07 61.2 171 28.1
Ciclev10023312m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.2e-07 60.5 133 33.8
FAN15G3021 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.2e-07 60.5 184 28.8
FAN24G3101 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.9e-07 60.1 184 28.8
Atru.chr8.1837 Acer truncatum HOM05D002630 ORTHO05D000952 3.8e-07 59.7 112 31.2
Actinidia31546 Actinidia chinensis HOM05D002630 ORTHO05D000952 3.8e-07 59.7 189 29.1
FAN13G0304 Fragaria x ananassa HOM05D010397 ORTHO05D000952 5.0e-07 59.3 178 27.0
Actinidia00474 Actinidia chinensis HOM05D007636 ORTHO05D000952 6.5e-07 58.9 185 28.1
Ciclev10033744m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.1e-06 58.2 128 35.2
Prupe.1G575600 Prunus persica HOM05D002630 ORTHO05D000952 1.5e-06 57.8 110 35.5
RcHm_v2.0_Chr7g0230611 Rosa chinensis HOM05D010397 ORTHO05D000952 1.5e-06 57.8 193 27.5
RcHm_v2.0_Chr7g0236441 Rosa chinensis HOM05D010397 ORTHO05D000952 2.5e-06 57.0 185 27.0
RcHm_v2.0_Chr7g0236511 Rosa chinensis HOM05D010397 ORTHO05D000952 2.5e-06 57.0 185 27.0
Cfa010188 Carpinus fangiana HOM05D002630 ORTHO05D000952 4.2e-06 56.2 179 29.1
arahy.Tifrunner.gnm1.ann1.UEI6NJ Arachis hypogaea HOM05D002630 ORTHO05D000952 5.5e-06 55.8 91 35.2
Eucgr.A00371 Eucalyptus grandis HOM05D000010 ORTHO05D017913 5.5e-06 55.8 174 29.3
Ciclev10003273m.g Citrus clementina HOM05D000010 ORTHO05D000952 7.2e-06 55.5 164 28.0
Haze_23576 Corylus avellana HOM05D002630 ORTHO05D000952 7.2e-06 55.5 219 27.9
FAN05G1528 Fragaria x ananassa HOM05D011155 ORTHO05D000952 9.4e-06 55.1 148 28.4
FAN24G1184 Fragaria x ananassa HOM05D022035 ORTHO05D000952 9.4e-06 55.1 169 28.4


User provided reference genes

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