Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 5.7e-119 431.0 234 100.0
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 1.8e-112 409.5 235 96.2
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.5e-79 300.1 234 76.9
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 2.2e-54 216.5 235 59.1
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 2.4e-48 196.4 235 55.7
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 1.4e-37 160.6 237 49.4
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 1.9e-37 160.2 231 46.3
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 9.4e-37 157.9 250 47.2
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 2.1e-36 156.8 271 44.3
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 3.6e-36 156.0 236 47.5
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.0e-35 152.9 220 48.6
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 3.0e-35 152.9 236 45.8
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 3.9e-35 152.5 231 48.5
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.9e-35 152.5 231 48.5
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 3.9e-35 152.5 266 44.7
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.5e-34 150.6 237 48.1
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 5.7e-34 148.7 224 44.6
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 1.3e-33 147.5 231 48.1
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 2.2e-33 146.7 226 43.8
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 3.7e-33 146.0 225 44.9
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 6.3e-33 145.2 230 46.1
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 8.2e-33 144.8 221 45.7
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 8.2e-33 144.8 232 45.7
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 3.1e-32 142.9 233 45.5
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 3.1e-32 142.9 224 46.9
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 7.0e-32 141.7 272 42.6
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 9.1e-32 141.4 214 45.3
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 2.6e-31 139.8 226 44.7
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 3.5e-31 139.4 196 48.5
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 7.7e-31 138.3 233 43.8
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 7.7e-31 138.3 216 44.9
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 1.0e-30 137.9 202 47.0
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.9e-30 136.3 231 45.9
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 6.5e-30 135.2 230 41.7
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 1.5e-29 134.0 230 44.8
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.5e-29 134.0 209 44.5
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 1.5e-29 134.0 224 43.3
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 2.5e-29 133.3 208 45.7
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 5.5e-29 132.1 211 44.1
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 7.2e-29 131.7 238 42.0
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.2e-28 131.0 231 42.0
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 2.1e-28 130.2 208 45.7
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 2.7e-28 129.8 230 42.6
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 3.6e-28 129.4 219 42.0
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 4.7e-28 129.0 239 41.8
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 6.1e-28 128.6 211 42.7
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 1.0e-27 127.9 229 41.0
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 1.4e-27 127.5 233 42.1
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 1.4e-27 127.5 224 40.6
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 1.8e-27 127.1 209 42.6
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 3.0e-27 126.3 200 43.0
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 4.0e-27 125.9 225 41.8
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 6.7e-27 125.2 222 43.7
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.5e-26 124.0 234 44.0
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 1.5e-26 124.0 248 40.7
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 3.3e-26 122.9 206 44.7
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 5.7e-26 122.1 207 44.0
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 7.5e-26 121.7 222 42.3
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 7.5e-26 121.7 237 42.6
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.7e-25 120.6 70 95.7
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 1.7e-25 120.6 192 45.8
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 1.7e-25 120.6 231 43.7
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 2.4e-24 116.7 210 40.0
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 2.4e-24 116.7 224 40.2
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 2.4e-24 116.7 222 38.7
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 2.4e-24 116.7 234 39.7
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 4.1e-24 115.9 210 40.0
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 4.1e-24 115.9 227 40.5
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 5.3e-24 115.5 210 41.0
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 5.3e-24 115.5 231 39.8
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 7.0e-24 115.2 233 40.8
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 1.2e-23 114.4 222 40.5
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 1.2e-23 114.4 225 37.8
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 1.2e-23 114.4 188 44.7
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 1.6e-23 114.0 220 40.0
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 3.5e-23 112.8 227 38.3
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 4.5e-23 112.5 209 45.0
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 7.7e-23 111.7 164 45.1
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 1.7e-22 110.5 229 38.9
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 2.2e-22 110.2 208 40.4
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 3.8e-22 109.4 233 40.3
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 5.0e-22 109.0 114 58.8
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 1.9e-21 107.1 235 37.0
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 2.5e-21 106.7 232 37.1
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 2.5e-21 106.7 233 37.3
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 5.5e-21 105.5 224 37.5
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 3.6e-20 102.8 209 39.2
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 4.7e-20 102.4 203 40.9
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 8.0e-20 101.7 245 35.9
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 5.2e-19 99.0 184 42.9
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 6.8e-19 98.6 184 40.8
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 8.8e-19 98.2 230 37.8
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 8.8e-19 98.2 195 41.0
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 4.4e-18 95.9 216 35.2
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 4.4e-18 95.9 216 35.2
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 3.7e-17 92.8 218 35.3
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 8.3e-17 91.7 212 35.8
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 7.0e-16 88.6 210 37.1
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 2.0e-15 87.0 149 44.3
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 4.5e-15 85.9 217 34.6
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 7.7e-15 85.1 216 33.3
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 2.3e-14 83.6 216 33.3
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 3.8e-14 82.8 233 33.9
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 2.8e-12 76.6 144 43.8
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 6.1e-12 75.5 238 32.8
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 1.0e-11 74.7 198 33.8
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.2e-10 71.2 133 41.4
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 4.4e-10 69.3 135 36.3
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 7.5e-10 68.6 231 33.8
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 2.8e-09 66.6 125 43.2
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.1e-08 64.7 166 36.1
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 3.1e-08 63.2 166 34.3
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 5.4e-08 62.4 150 36.0
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.6e-07 60.8 169 35.5


User provided reference genes

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