Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 1.4e-120 436.4 235 100.0
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 8.1e-113 410.6 235 96.2
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.8e-80 303.1 235 76.6
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 6.9e-56 221.5 236 59.7
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 1.1e-48 197.6 236 55.5
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 1.7e-38 163.7 232 47.0
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 5.0e-38 162.2 210 51.4
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 4.2e-37 159.1 237 46.4
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 2.7e-36 156.4 232 49.1
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.7e-36 156.4 232 49.1
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.7e-36 156.4 221 49.3
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 2.7e-36 156.4 238 48.3
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 1.0e-35 154.5 238 47.9
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 1.4e-35 154.1 272 43.8
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 4.0e-35 152.5 237 46.4
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 8.8e-35 151.4 232 48.7
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 2.0e-34 150.2 267 44.2
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 2.6e-34 149.8 226 45.1
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 9.8e-34 147.9 226 45.1
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 3.7e-33 146.0 234 45.7
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 6.3e-33 145.2 226 45.6
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 8.3e-33 144.8 232 44.8
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 1.4e-32 144.1 215 45.6
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 3.1e-32 142.9 227 43.2
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 9.1e-32 141.4 273 42.5
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 9.1e-32 141.4 225 45.3
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 2.7e-31 139.8 222 44.6
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 5.9e-31 138.7 197 48.2
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.0e-30 137.9 232 46.1
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 1.0e-30 137.9 227 44.5
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.3e-30 137.5 206 44.7
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 1.7e-30 137.1 225 43.6
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 1.7e-30 137.1 236 43.6
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 1.7e-30 137.1 217 44.7
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 2.2e-30 136.7 231 45.0
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 2.9e-30 136.3 231 43.3
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 1.1e-29 134.4 232 43.5
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 1.9e-29 133.7 235 42.1
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 5.5e-29 132.1 203 45.3
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 7.2e-29 131.7 214 44.4
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 9.5e-29 131.3 214 44.4
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.6e-28 130.6 232 41.8
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 2.1e-28 130.2 240 41.7
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 2.1e-28 130.2 214 43.9
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 3.6e-28 129.4 211 43.1
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 4.7e-28 129.0 211 43.6
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 4.7e-28 129.0 209 44.5
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 8.0e-28 128.3 194 46.9
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 1.0e-27 127.9 230 40.9
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 2.3e-27 126.7 235 43.0
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 3.0e-27 126.3 225 40.4
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 4.0e-27 125.9 201 42.8
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 4.0e-27 125.9 234 42.3
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 5.2e-27 125.6 238 42.4
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 5.2e-27 125.6 212 43.4
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 1.2e-26 124.4 232 41.4
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 2.6e-26 123.2 193 46.1
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 4.4e-26 122.5 246 40.2
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 4.4e-26 122.5 223 43.0
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 5.7e-26 122.1 223 38.6
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 5.7e-26 122.1 208 43.3
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.7e-25 120.6 70 95.7
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 3.7e-25 119.4 226 38.5
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 4.9e-25 119.0 223 41.7
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 4.9e-25 119.0 235 39.6
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 4.1e-24 115.9 225 40.0
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 4.1e-24 115.9 210 45.7
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 9.2e-24 114.8 234 40.2
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 1.2e-23 114.4 215 40.5
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 2.0e-23 113.6 223 39.9
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 2.7e-23 113.2 234 40.6
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 3.5e-23 112.8 213 40.8
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 3.5e-23 112.8 213 39.9
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 3.5e-23 112.8 233 40.3
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 4.5e-23 112.5 212 38.7
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 5.9e-23 112.1 209 40.7
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 7.7e-23 111.7 212 38.7
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 1.0e-22 111.3 228 38.2
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 1.3e-22 110.9 212 39.6
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 2.3e-22 110.2 156 47.4
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 2.9e-22 109.8 114 58.8
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 3.8e-22 109.4 233 36.9
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 1.1e-21 107.8 189 43.4
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 3.3e-21 106.3 210 37.6
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 5.6e-21 105.5 211 39.8
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 1.2e-20 104.4 234 37.6
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 1.2e-20 104.4 246 36.2
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 4.7e-20 102.4 204 40.7
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 1.4e-19 100.9 213 37.6
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 2.3e-19 100.1 134 51.5
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 5.2e-19 99.0 196 41.3
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 6.8e-19 98.6 230 37.0
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 2.6e-18 96.7 222 36.0
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 5.7e-18 95.5 185 42.2
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 1.7e-17 94.0 213 35.7
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 1.7e-17 94.0 213 35.7
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 4.1e-16 89.4 234 35.5
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 5.4e-16 89.0 215 35.3
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 1.2e-15 87.8 149 44.3
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 2.0e-15 87.0 212 37.3
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 3.5e-15 86.3 214 35.0
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 3.0e-14 83.2 213 33.8
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 6.6e-14 82.0 138 42.0
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 8.6e-14 81.6 213 33.8
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 1.5e-13 80.9 135 45.9
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 2.8e-12 76.6 143 42.0
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 1.4e-11 74.3 199 33.7
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 4.4e-10 69.3 123 42.3
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 7.5e-10 68.6 232 33.6
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 1.3e-09 67.8 167 36.5
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 2.9e-09 66.6 135 35.6
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 7.0e-08 62.0 170 35.9
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 2.0e-07 60.5 137 38.7
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 7.8e-07 58.5 137 38.0


User provided reference genes

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