Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04768 Corylus avellana HOM05D005701 ORTHO05D007058 2.3e-119 432.2 211 100.0
Cfa006081 Carpinus fangiana HOM05D005701 ORTHO05D007058 3.4e-102 375.2 211 87.2
QL02p002445 Quercus lobata HOM05D005701 ORTHO05D007058 1.7e-90 336.3 210 76.7
CiPaw.08G102100 Carya illinoinensis HOM05D005701 ORTHO05D007058 9.5e-89 330.5 211 75.4
Gohir.A12G006700 Gossypium hirsutum HOM05D005701 ORTHO05D007058 6.4e-85 317.8 214 72.4
Sed0003723 Sechium edule HOM05D005701 ORTHO05D007058 3.2e-84 315.5 211 71.1
Potri.002G212400 Populus trichocarpa HOM05D005701 ORTHO05D007058 5.4e-84 314.7 214 71.0
ClCG09G006770 Citrullus lanatus HOM05D005701 ORTHO05D007058 1.6e-83 313.2 211 71.1
Thecc.01G285600 Theobroma cacao HOM05D005701 ORTHO05D007058 2.7e-83 312.4 215 70.7
Dinv11265 Davidia involucrata HOM05D005701 ORTHO05D007058 1.0e-82 310.5 205 72.2
Actinidia24310 Actinidia chinensis HOM05D005701 ORTHO05D007058 2.3e-82 309.3 206 73.8
Duzib138G1703 Durio zibethinus HOM05D005701 ORTHO05D007058 5.1e-82 308.1 214 71.0
TWI59G0853 Tripterygium wilfordii HOM05D005701 ORTHO05D007058 6.6e-82 307.8 213 70.9
Prupe.8G247700 Prunus persica HOM05D005701 ORTHO05D007058 1.9e-81 306.2 214 71.0
CSS0017429 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 3.3e-81 305.4 206 70.9
PGR119G1915 Punica granatum HOM05D005701 ORTHO05D007058 5.6e-81 304.7 203 72.9
MELO3C015871.2 Cucumis melo HOM05D005701 ORTHO05D007058 7.3e-81 304.3 212 70.3
MD11G1292100 Malus domestica HOM05D005701 ORTHO05D007058 9.6e-81 303.9 215 68.8
vmacro02538 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 9.6e-81 303.9 206 71.4
GSVIVG01011062001 Vitis vinifera HOM05D005701 ORTHO05D007058 9.6e-81 303.9 207 71.0
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.2e-80 303.5 206 71.8
Ciclev10022400m.g Citrus clementina HOM05D005701 ORTHO05D007058 1.6e-80 303.1 206 69.9
Lalb_Chr06g0163181 Lupinus albus HOM05D005701 ORTHO05D007058 4.7e-80 301.6 208 71.2
MD03G1271500 Malus domestica HOM05D005701 ORTHO05D007058 1.4e-79 300.1 216 67.1
CsaV3_7G028500 Cucumis sativus L. HOM05D005701 ORTHO05D007058 2.4e-79 299.3 212 69.8
PSO170G3928 Papaver somniferum HOM05D005701 ORTHO05D007058 3.1e-79 298.9 206 69.9
Eucgr.H01544 Eucalyptus grandis HOM05D005701 ORTHO05D007058 5.2e-79 298.1 198 70.7
Manes.05G072000 Manihot esculenta HOM05D005701 ORTHO05D007058 6.8e-79 297.7 206 70.9
PSO302G0130 Papaver somniferum HOM05D005701 ORTHO05D007058 1.2e-78 297.0 206 69.9
Oeu006228.1 Olea europaea HOM05D005701 ORTHO05D007058 3.4e-78 295.4 204 71.6
Glyma.02G150100 Glycine max HOM05D005701 ORTHO05D007058 5.8e-78 294.7 206 67.5
Lsat_1_v5_gn_5_187740 Lactuca sativa HOM05D005701 ORTHO05D007058 5.8e-78 294.7 206 66.0
PGSC0003DMG401020044 Solanum tuberosum HOM05D005701 ORTHO05D007058 9.9e-78 293.9 206 68.9
CANSAT25G0672 Cannabis sativa HOM05D005701 ORTHO05D007058 2.2e-77 292.7 210 70.5
FAN15G1986 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.9e-77 292.4 210 66.7
Sc24g0004070 Simmondsia chinensis HOM05D005701 ORTHO05D007058 4.9e-77 291.6 206 67.5
Nn1g02106 Nelumbo nucifera HOM05D005701 ORTHO05D007058 8.4e-77 290.8 190 72.6
TAR365G0921 Trochodendron aralioides HOM05D005701 ORTHO05D007058 1.1e-76 290.4 183 72.7
THA.LOC104801212 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 1.4e-76 290.0 192 71.4
FAN27G2557 Fragaria x ananassa HOM05D005701 ORTHO05D007058 1.9e-76 289.7 216 67.1
FAN20G1753 Fragaria x ananassa HOM05D005701 ORTHO05D007058 2.4e-76 289.3 210 68.1
Solyc06g084390.3 Solanum lycopersicum HOM05D005701 ORTHO05D007058 3.2e-76 288.9 206 67.5
Sopen06g035780 Solanum pennellii HOM05D005701 ORTHO05D007058 3.2e-76 288.9 206 67.5
Nitab4.5_0002093g0100 Nicotiana tabacum HOM05D005701 ORTHO05D007058 4.2e-76 288.5 216 66.2
THA.LOC104826003 Tarenaya hassleriana HOM05D005701 ORTHO05D007058 4.2e-76 288.5 191 71.2
Psat6g169920 Pisum sativum HOM05D005701 ORTHO05D007058 5.4e-76 288.1 205 66.3
RcHm_v2.0_Chr6g0291961 Rosa chinensis HOM05D005701 ORTHO05D007058 1.6e-75 286.6 208 66.8
Lj5g0014836 Lotus japonicus HOM05D005701 ORTHO05D007058 2.7e-75 285.8 206 65.5
MSTRG.17433 Avicennia marina HOM05D005701 ORTHO05D007058 3.5e-75 285.4 208 68.3
Ca_10397_v3 Cicer arietinum L. HOM05D005701 ORTHO05D007058 4.6e-75 285.0 204 66.2
FAN24G1361 Fragaria x ananassa HOM05D005701 ORTHO05D007058 4.6e-75 285.0 210 65.2
SalBow6G2366 Salvia bowleyana HOM05D005701 ORTHO05D007058 6.0e-75 284.6 204 65.2
Migut.N02175 Erythranthe guttata HOM05D005701 ORTHO05D007058 1.0e-74 283.9 202 67.3
ECA248G0764 Erigeron canadensis HOM05D005701 ORTHO05D007058 1.7e-74 283.1 191 69.1
Aqoxy2G03192 Aquilegia oxysepala HOM05D005701 ORTHO05D007058 3.0e-74 282.3 204 65.2
TPR.G26671 Trifolium pratense HOM05D005701 ORTHO05D007058 3.0e-74 282.3 217 64.1
Phvul.007G168600 Phaseolus vulgaris HOM05D005701 ORTHO05D007058 3.9e-74 282.0 207 66.2
HanXRQChr14g0430981 Helianthus annuus HOM05D005701 ORTHO05D007058 5.1e-74 281.6 191 69.1
Peaxi162Scf00783g00418 Petunia axillaris HOM05D005701 ORTHO05D007058 5.1e-74 281.6 183 72.1
Migut.N02139 Erythranthe guttata HOM05D005701 ORTHO05D007058 6.6e-74 281.2 202 66.8
Medtr1g089810 Medicago truncatula HOM05D005701 ORTHO05D007058 6.6e-74 281.2 207 64.3
AT4G02980 Arabidopsis thaliana HOM05D005701 ORTHO05D007058 1.1e-73 280.4 213 65.3
Lj2A1180T63 Lonicera japonica HOM05D005701 ORTHO05D007058 1.1e-73 280.4 211 65.4
Cc01_g05150 Coffea canephora HOM05D005701 ORTHO05D007058 2.5e-73 279.3 184 72.3
CAN.G1682.11 Capsicum annuum HOM05D005701 ORTHO05D007058 3.3e-73 278.9 188 70.2
Ah.08g212880 Amaranthus hybridus HOM05D005701 ORTHO05D007058 9.6e-73 277.3 208 64.4
Hma1.2p1_0628F.1_g191820 Hydrangea macrophylla HOM05D005701 ORTHO05D007058 2.8e-72 275.8 183 74.3
AL6G49950 Arabidopsis lyrata HOM05D005701 ORTHO05D007058 6.2e-72 274.6 213 63.8
A09p02300 Brassica napus HOM05D005701 ORTHO05D007058 6.2e-72 274.6 213 63.8
BraA09t35879Z Brassica rapa HOM05D005701 ORTHO05D007058 6.2e-72 274.6 213 63.8
Hund06566 Selenicereus undatus HOM05D005701 ORTHO05D007058 1.1e-71 273.9 211 63.5
Nitab4.5_0010603g0020 Nicotiana tabacum HOM05D005701 ORTHO05D007058 1.4e-71 273.5 185 69.7
BolC9t53172H Brassica oleracea HOM05D005701 ORTHO05D007058 4.0e-71 271.9 204 64.2
ECA248G1579 Erigeron canadensis HOM05D005701 ORTHO05D007058 4.0e-71 271.9 218 61.5
Carub.0006s3407 Capsella rubella HOM05D005701 ORTHO05D007058 5.3e-71 271.6 213 62.9
Aa31LG5G2530 Aethionema arabicum HOM05D005701 ORTHO05D007058 9.0e-71 270.8 208 61.5
C09p02410 Brassica napus HOM05D005701 ORTHO05D007058 9.0e-71 270.8 204 64.2
EL10Ac7g17192 Beta vulgaris HOM05D005701 ORTHO05D007058 2.0e-70 269.6 206 60.7
BolC3t16031H Brassica oleracea HOM05D005701 ORTHO05D007058 2.0e-70 269.6 207 65.2
BcaC01g06714 Brassica carinata HOM05D005701 ORTHO05D007058 2.6e-70 269.2 207 65.2
C03p37390 Brassica napus HOM05D005701 ORTHO05D007058 2.6e-70 269.2 207 65.2
BraA03t12248Z Brassica rapa HOM05D005701 ORTHO05D007058 3.4e-70 268.9 207 65.2
Thhalv10028980m.g Eutrema salsugineum HOM05D005701 ORTHO05D007058 3.4e-70 268.9 207 64.3
A03p30690 Brassica napus HOM05D005701 ORTHO05D007058 5.8e-70 268.1 207 65.2
BcaB01g02494 Brassica carinata HOM05D005701 ORTHO05D007058 7.6e-70 267.7 207 63.8
SGA_v2.0_scaffold1G00437 Striga asiatica HOM05D005701 ORTHO05D007058 1.7e-69 266.5 222 60.4
Migut.D00251 Erythranthe guttata HOM05D005701 ORTHO05D007058 2.9e-69 265.8 210 62.4
Sp6g03020 Schrenkiella parvula HOM05D005701 ORTHO05D007058 2.9e-69 265.8 207 64.3
CARHR251350 Cardamine hirsuta HOM05D005701 ORTHO05D007058 4.9e-69 265.0 184 69.0
Thecc.01G285700 Theobroma cacao HOM05D005701 ORTHO05D007058 9.3e-68 260.8 210 61.9
unitig_8.g3319 Utricularia gibba HOM05D005701 ORTHO05D007058 3.5e-67 258.8 199 62.8
AUR62036778 Chenopodium quinoa HOM05D005701 ORTHO05D007058 2.3e-66 256.1 247 53.4
HPP92_010620 Vanilla planifolia HOM05D005701 ORTHO05D007058 3.0e-66 255.8 206 64.1
Manes.01G211300 Manihot esculenta HOM05D005701 ORTHO05D007058 1.5e-65 253.4 170 72.4
CDE08G1024 Ceratophyllum demersum HOM05D005701 ORTHO05D007058 2.1e-64 249.6 206 62.1
Atru.chr5.1332 Acer truncatum HOM05D005701 ORTHO05D007058 2.4e-63 246.1 173 70.5
Gorai.008G006100 Gossypium raimondii HOM05D005701 ORTHO05D007058 4.0e-63 245.4 181 67.4
SalBow3G3506 Salvia bowleyana HOM05D005701 ORTHO05D007058 3.4e-62 242.3 185 63.2
Cc01_g03720 Coffea canephora HOM05D005701 ORTHO05D007058 4.5e-62 241.9 162 71.0
Zm00001eb410800 Zea mays HOM05D005701 ORTHO05D007058 1.9e-60 236.5 208 58.2
Os12g0529400 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 3.2e-60 235.7 207 57.0
BcaB01g01993 Brassica carinata HOM05D005701 ORTHO05D007058 1.6e-59 233.4 165 67.9
Zm00001eb137840 Zea mays HOM05D005701 ORTHO05D007058 6.0e-59 231.5 200 57.5
SGA_v2.0_scaffold172G39038 Striga asiatica HOM05D005701 ORTHO05D007058 3.0e-58 229.2 179 65.9
Zm00001eb410760 Zea mays HOM05D005701 ORTHO05D007058 3.0e-58 229.2 214 56.5
VMungo0720G2830 Vigna mungo HOM05D005701 ORTHO05D007058 5.1e-58 228.4 172 65.1
Oeu047892.2 Olea europaea HOM05D005701 ORTHO05D007058 1.9e-57 226.5 288 45.8
TPR.G13316 Trifolium pratense HOM05D005701 ORTHO05D007058 2.5e-57 226.1 255 50.6
Rhsim13G0021400 Rhododendron simsii HOM05D005701 ORTHO05D007058 9.6e-57 224.2 149 71.1
MSTRG.12575 Avicennia marina HOM05D005701 ORTHO05D007058 6.9e-55 218.0 213 51.6
Cpa.g.sc9.126 Carica papaya HOM05D005701 ORTHO05D007058 2.3e-50 203.0 155 65.8
Cc00_g05320 Coffea canephora HOM05D005701 ORTHO05D007058 1.6e-48 196.8 187 52.4
FvH4_2g24150 Fragaria vesca HOM05D005701 ORTHO05D007058 6.2e-48 194.9 151 62.9
SMO164G0245 Selaginella moellendorffii HOM05D005701 ORTHO05D007058 1.5e-46 190.3 175 53.1
Pp3c4_12750 Physcomitrium patens HOM05D005701 ORTHO05D007058 1.0e-45 187.6 195 48.2
Pp3c4_12660 Physcomitrium patens HOM05D005701 ORTHO05D007058 2.9e-45 186.0 172 52.3
MBI19_g33449_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 3.5e-43 179.1 129 66.7
QL02p081958 Quercus lobata HOM05D005701 ORTHO05D007058 7.9e-43 177.9 95 87.4
vmacro02539 Vaccinium macrocarpon HOM05D005701 ORTHO05D007058 7.9e-43 177.9 150 61.3
MBI19_g39288_MAGBIO Magnolia biondii HOM05D005701 ORTHO05D007058 3.0e-42 176.0 126 66.7
CAN.G996.16 Capsicum annuum HOM05D005701 ORTHO05D007058 9.7e-41 171.0 152 57.9
Gohir.D12G006100 Gossypium hirsutum HOM05D005701 ORTHO05D007058 1.3e-40 170.6 138 64.5
ATR0626G241 Amborella trichopoda HOM05D005701 ORTHO05D007058 2.4e-39 166.4 152 56.6
Zm00001eb440220 Zea mays HOM05D005701 ORTHO05D007058 1.3e-37 160.6 162 53.1
Rhsim13G0021300 Rhododendron simsii HOM05D005701 ORTHO05D007058 5.0e-37 158.7 246 38.2
AUR62033690 Chenopodium quinoa HOM05D005701 ORTHO05D007058 2.1e-35 153.3 91 74.7
CBR_g38020 Chara braunii HOM05D005701 ORTHO05D007058 3.9e-34 149.1 117 54.7
Ah.04g164000 Amaranthus hybridus HOM05D005701 ORTHO05D007058 2.2e-32 143.3 90 67.8
Os12g0529300 Oryza sativa ssp. japonica HOM05D005701 ORTHO05D007058 5.3e-31 138.7 84 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1970 Anthoceros agrestis HOM05D005701 ORTHO05D007058 1.2e-30 137.5 181 42.5
Zm00001eb410780 Zea mays HOM05D005701 ORTHO05D007058 2.0e-30 136.7 166 48.2
C09p02610 Brassica napus HOM05D005701 ORTHO05D007058 6.7e-26 121.7 81 67.9
CSS0004068 Camellia sinensis var. sinensis HOM05D005701 ORTHO05D007058 2.0e-25 120.2 206 39.8
Lsat_1_v5_gn_4_17561 Lactuca sativa HOM05D005701 ORTHO05D007058 7.7e-22 108.2 120 50.0
HPP92_017198 Vanilla planifolia HOM05D005701 ORTHO05D051565 1.8e-18 97.1 205 35.6
Rhsim11G0018300 Rhododendron simsii HOM05D003327 ORTHO05D004535 1.0e-13 81.3 45 82.2


User provided reference genes

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