Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04691 Corylus avellana HOM05D003848 ORTHO05D004616 1.3e-178 630.2 479 100.0
Cfa003508 Carpinus fangiana HOM05D003848 ORTHO05D004616 3.1e-167 592.4 480 89.0
Haze_16066 Corylus avellana HOM05D003848 ORTHO05D004616 1.0e-162 577.4 474 92.2
Cfa006159 Carpinus fangiana HOM05D003848 ORTHO05D004616 8.1e-160 567.8 481 89.8
CiPaw.08G106300 Carya illinoinensis HOM05D003848 ORTHO05D004616 5.8e-118 428.7 503 69.8
Glyma.10G027400 Glycine max HOM05D003848 ORTHO05D004616 7.4e-105 385.2 502 73.5
QL01p012613 Quercus lobata HOM05D003848 ORTHO05D004616 4.8e-104 382.5 511 69.5
Glyma.02G146600 Glycine max HOM05D003848 ORTHO05D004616 3.1e-103 379.8 513 71.9
Phvul.007G172800 Phaseolus vulgaris HOM05D003848 ORTHO05D004616 5.3e-103 379.0 496 71.6
VMungo0720G2447 Vigna mungo HOM05D003848 ORTHO05D004616 9.0e-103 378.3 506 71.1
Lalb_Chr06g0162931 Lupinus albus HOM05D003848 ORTHO05D004616 3.2e-100 369.8 544 66.7
Psat4g156760 Pisum sativum HOM05D003848 ORTHO05D004616 7.9e-99 365.2 519 64.0
Cpa.g.sc52.49 Carica papaya HOM05D003848 ORTHO05D004616 8.8e-98 361.7 536 67.7
arahy.Tifrunner.gnm1.ann1.ARWK2P Arachis hypogaea HOM05D003848 ORTHO05D004616 3.3e-97 359.8 544 64.7
Potri.002G051500 Populus trichocarpa HOM05D003848 ORTHO05D004616 1.3e-96 357.8 522 65.9
Lj5g0005692 Lotus japonicus HOM05D003848 ORTHO05D004616 1.7e-96 357.5 488 65.8
arahy.Tifrunner.gnm1.ann1.X3NAFX Arachis hypogaea HOM05D003848 ORTHO05D004616 8.2e-96 355.1 538 62.5
TWI59G1147 Tripterygium wilfordii HOM05D003848 ORTHO05D004616 5.3e-95 352.4 520 66.3
GSVIVG01001165001 Vitis vinifera HOM05D003848 ORTHO05D004616 4.5e-94 349.4 476 66.6
Prupe.8G239200 Prunus persica HOM05D003848 ORTHO05D004616 5.9e-94 349.0 533 66.8
FvH4_4g12190 Fragaria vesca HOM05D003848 ORTHO05D004616 5.5e-92 342.4 520 67.3
COL.COLO4_09072 Corchorus olitorius HOM05D003848 ORTHO05D004616 7.2e-92 342.0 513 49.9
Thecc.01G276600 Theobroma cacao HOM05D003848 ORTHO05D004616 7.2e-92 342.0 535 61.5
FAN07G0259 Fragaria x ananassa HOM05D003848 ORTHO05D004616 2.1e-91 340.5 523 67.1
Medtr8g028640 Medicago truncatula HOM05D003848 ORTHO05D004616 2.1e-91 340.5 501 68.3
FAN17G2080 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.8e-90 337.4 516 66.7
Gohir.A12G004500 Gossypium hirsutum HOM05D003848 ORTHO05D004616 1.8e-90 337.4 518 63.9
Ca_09749_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 5.1e-90 335.9 515 68.0
MD11G1283600 Malus domestica HOM05D003848 ORTHO05D004616 1.5e-89 334.3 537 66.5
Ciclev10019827m.g Citrus clementina HOM05D003848 ORTHO05D004616 2.6e-89 333.6 502 68.7
Potri.005G210900 Populus trichocarpa HOM05D003848 ORTHO05D004616 2.6e-89 333.6 517 65.6
RcHm_v2.0_Chr4g0409951 Rosa chinensis HOM05D003848 ORTHO05D004616 3.3e-89 333.2 506 66.4
Atru.chr5.1462 Acer truncatum HOM05D003848 ORTHO05D004616 6.3e-88 328.9 518 62.0
Gorai.008G004000 Gossypium raimondii HOM05D003848 ORTHO05D004616 3.1e-87 326.6 517 65.6
MELO3C009735.2 Cucumis melo HOM05D003848 ORTHO05D004616 4.1e-87 326.2 551 61.9
PGR119G0967 Punica granatum HOM05D003848 ORTHO05D004616 9.1e-87 325.1 563 64.3
CsaV3_3G039920 Cucumis sativus L. HOM05D003848 ORTHO05D004616 1.2e-86 324.7 544 65.3
Sabra05G0161100 Salix brachista HOM05D003848 ORTHO05D004616 5.0e-85 319.3 523 60.6
Gohir.D12G004200 Gossypium hirsutum HOM05D003848 ORTHO05D004616 8.5e-85 318.5 517 65.4
Manes.05G077600 Manihot esculenta HOM05D003848 ORTHO05D004616 8.5e-85 318.5 537 62.2
Sopen11g029330 Solanum pennellii HOM05D003848 ORTHO05D004616 7.2e-84 315.5 560 56.4
Solyc11g071660.1 Solanum lycopersicum HOM05D003848 ORTHO05D004616 2.7e-83 313.5 563 56.3
Cc00_g04130 Coffea canephora HOM05D003848 ORTHO05D004616 3.6e-83 313.2 463 68.0
CAN.G439.4 Capsicum annuum HOM05D003848 ORTHO05D004616 1.0e-82 311.6 501 60.5
Dinv32920 Davidia involucrata HOM05D003848 ORTHO05D004616 3.0e-82 310.1 417 64.7
MD03G1262900 Malus domestica HOM05D003848 ORTHO05D004616 6.7e-82 308.9 532 63.2
SGA_v2.0_scaffold1G00491 Striga asiatica HOM05D003848 ORTHO05D004616 8.8e-82 308.5 498 67.5
PGSC0003DMG400046756 Solanum tuberosum HOM05D003848 ORTHO05D004616 1.1e-81 308.1 552 58.3
Hma1.2p1_0822F.1_g224390 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 4.4e-81 306.2 481 63.0
ClCG10G016420 Citrullus lanatus HOM05D003848 ORTHO05D004616 7.5e-81 305.4 541 63.8
FAN22G0164 Fragaria x ananassa HOM05D003848 ORTHO05D004616 9.7e-81 305.1 503 66.2
Oeu041715.2 Olea europaea HOM05D003848 ORTHO05D004616 1.3e-80 304.7 519 56.6
THA.LOC104801238 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 1.3e-80 304.7 438 72.1
Nitab4.5_0005156g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 1.7e-80 304.3 430 66.3
Sed0011367 Sechium edule HOM05D003848 ORTHO05D004616 1.7e-80 304.3 527 64.5
Nitab4.5_0006700g0010 Nicotiana tabacum HOM05D003848 ORTHO05D004616 2.2e-80 303.9 426 73.7
Oeu028073.1 Olea europaea HOM05D003848 ORTHO05D004616 2.2e-80 303.9 502 60.0
Aqoxy2G03377 Aquilegia oxysepala HOM05D003848 ORTHO05D004616 2.8e-80 303.5 525 57.9
vmacro18863 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 2.8e-80 303.5 507 63.1
Aa31LG5G2360 Aethionema arabicum HOM05D003848 ORTHO05D004616 8.2e-80 302.0 439 71.1
MSTRG.21553 Avicennia marina HOM05D003848 ORTHO05D004616 1.1e-79 301.6 568 54.8
QL03p072399 Quercus lobata HOM05D003848 ORTHO05D004616 1.1e-79 301.6 489 55.0
TAR369G1095 Trochodendron aralioides HOM05D003848 ORTHO05D004616 1.4e-79 301.2 541 58.2
vmacro19513 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 1.4e-79 301.2 509 59.9
HPP92_009020 Vanilla planifolia HOM05D003848 ORTHO05D004616 1.8e-79 300.8 464 55.6
BcaB01g02014 Brassica carinata HOM05D003848 ORTHO05D004616 5.3e-79 299.3 408 70.3
Nn1g02285 Nelumbo nucifera HOM05D003848 ORTHO05D004616 9.1e-79 298.5 556 57.4
Cc01_g10690 Coffea canephora HOM05D003848 ORTHO05D004616 1.6e-78 297.7 593 53.5
Lj2C1116T3 Lonicera japonica HOM05D003848 ORTHO05D004616 2.0e-78 297.4 515 62.9
THA.LOC104825995 Tarenaya hassleriana HOM05D003848 ORTHO05D004616 1.0e-77 295.0 434 73.3
Migut.D00312 Erythranthe guttata HOM05D003848 ORTHO05D004616 1.3e-77 294.7 548 59.7
unitig_0.g1040 Utricularia gibba HOM05D003848 ORTHO05D004616 1.3e-77 294.7 494 55.7
ECA248G3600 Erigeron canadensis HOM05D003848 ORTHO05D004616 2.2e-77 293.9 540 58.1
Manes.01G206800 Manihot esculenta HOM05D003848 ORTHO05D004616 5.0e-77 292.7 517 54.4
Actinidia24902 Actinidia chinensis HOM05D003848 ORTHO05D004616 6.5e-77 292.4 533 62.7
TAR633G0718 Trochodendron aralioides HOM05D003848 ORTHO05D004616 8.5e-77 292.0 553 59.5
Lj1C175T4 Lonicera japonica HOM05D003848 ORTHO05D004616 1.1e-76 291.6 523 64.2
Thhalv10028691m.g Eutrema salsugineum HOM05D003848 ORTHO05D004616 1.9e-76 290.8 415 73.7
ATR0824G270 Amborella trichopoda HOM05D003848 ORTHO05D004616 3.2e-76 290.0 178 84.8
AT4G02720 Arabidopsis thaliana HOM05D003848 ORTHO05D004616 1.2e-75 288.1 424 72.6
CANSAT01G1819 Cannabis sativa HOM05D003848 ORTHO05D004616 1.2e-75 288.1 171 87.7
TPR.G28157 Trifolium pratense HOM05D003848 ORTHO05D004616 1.6e-75 287.7 168 88.7
Peaxi162Scf00217g00025 Petunia axillaris HOM05D003848 ORTHO05D004616 2.1e-75 287.3 519 64.0
MBI07_g03188_MAGBIO Magnolia biondii HOM05D003848 ORTHO05D004616 2.7e-75 287.0 552 49.6
SHI27493 Sapria himalayana HOM05D004058 ORTHO05D001984 3.6e-75 286.6 174 84.5
ATR0332G007 Amborella trichopoda HOM05D003848 ORTHO05D004616 6.1e-75 285.8 526 55.1
FAN22G1557 Fragaria x ananassa HOM05D003848 ORTHO05D004616 6.1e-75 285.8 172 84.9
AL6G50290 Arabidopsis lyrata HOM05D003848 ORTHO05D004616 2.3e-74 283.9 424 70.8
Carub.0006s3439 Capsella rubella HOM05D003848 ORTHO05D004616 3.0e-74 283.5 430 70.7
SEGI_20713 Sequoiadendron giganteum HOM05D003848 ORTHO05D004616 6.8e-74 282.3 172 86.0
Rhsim01G0273900 Rhododendron simsii HOM05D003848 ORTHO05D004616 5.7e-73 279.3 449 58.4
CDE06G2067 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 7.5e-73 278.9 170 83.5
Sp6g02650 Schrenkiella parvula HOM05D003848 ORTHO05D004616 1.7e-72 277.7 423 71.6
BolC9t53150H Brassica oleracea HOM05D003848 ORTHO05D004616 4.8e-72 276.2 407 66.1
AagrBONN_evm.TU.Sc2ySwM_362.1784 Anthoceros agrestis HOM05D003848 ORTHO05D004616 6.3e-72 275.8 158 88.0
HanXRQChr01g0002971 Helianthus annuus HOM05D003848 ORTHO05D004616 3.1e-71 273.5 572 52.6
Lsat_1_v5_gn_5_184160 Lactuca sativa HOM05D003848 ORTHO05D004616 3.1e-71 273.5 558 59.1
EL10Ac5g10556 Beta vulgaris HOM05D003848 ORTHO05D004616 4.1e-71 273.1 515 61.7
Mapoly0051s0007 Marchantia polymorpha HOM05D003848 ORTHO05D004616 4.1e-71 273.1 161 84.5
DCAR_000720 Daucus carota HOM05D003848 ORTHO05D004616 7.0e-71 272.3 508 61.6
BolC8t51344H Brassica oleracea HOM05D003848 ORTHO05D004616 1.2e-70 271.6 408 63.2
BcaC04g24009 Brassica carinata HOM05D003848 ORTHO05D004616 3.5e-70 270.0 406 65.0
Zm00001eb314820 Zea mays HOM05D003848 ORTHO05D004616 7.7e-70 268.9 163 84.0
A09p02120 Brassica napus HOM05D003848 ORTHO05D004616 1.7e-69 267.7 407 62.4
SMO231G0049 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 3.8e-69 266.5 174 78.2
BraA09t35861Z Brassica rapa HOM05D003848 ORTHO05D004616 5.0e-69 266.2 407 62.2
CARHR251050 Cardamine hirsuta HOM05D003848 ORTHO05D004616 5.0e-69 266.2 409 71.9
Ah.02g110950 Amaranthus hybridus HOM05D003848 ORTHO05D004616 6.5e-69 265.8 169 82.8
Pp3c9_17960 Physcomitrium patens HOM05D003848 ORTHO05D004616 1.1e-68 265.0 170 78.8
SMO351G0411 Selaginella moellendorffii HOM05D003848 ORTHO05D004616 1.5e-68 264.6 174 77.6
C08p37610 Brassica napus HOM05D003848 ORTHO05D004616 3.2e-68 263.5 407 63.1
Sc24g0003320 Simmondsia chinensis HOM05D003848 ORTHO05D004616 3.2e-68 263.5 566 52.8
CBR_g4136 Chara braunii HOM05D003848 ORTHO05D004616 2.1e-67 260.8 166 80.1
AagrBONN_evm.TU.Sc2ySwM_344.5133 Anthoceros agrestis HOM05D003848 ORTHO05D004616 1.4e-66 258.1 146 88.4
BcaC01g01560 Brassica carinata HOM05D003848 ORTHO05D004616 1.2e-65 255.0 178 75.3
AUR62003538 Chenopodium quinoa HOM05D003848 ORTHO05D004616 9.8e-65 251.9 161 81.4
AUR62017852 Chenopodium quinoa HOM05D003848 ORTHO05D004616 9.8e-65 251.9 161 81.4
Hund11854 Selenicereus undatus HOM05D003848 ORTHO05D004616 1.7e-64 251.1 170 80.6
Duzib177G1090 Durio zibethinus HOM05D003848 ORTHO05D004616 3.7e-64 250.0 173 75.7
C03p93080 Brassica napus HOM05D003848 ORTHO05D004616 6.3e-64 249.2 175 75.4
C03p93100 Brassica napus HOM05D003848 ORTHO05D004616 5.4e-63 246.1 407 60.0
BolC3t21613H Brassica oleracea HOM05D003848 ORTHO05D004616 2.0e-62 244.2 407 58.7
C03p93150 Brassica napus HOM05D003848 ORTHO05D004616 2.7e-62 243.8 156 80.8
BcaC01g01561 Brassica carinata HOM05D003848 ORTHO05D004616 7.7e-62 242.3 407 41.3
PSO210G3188 Papaver somniferum HOM05D003848 ORTHO05D004616 8.6e-61 238.8 553 48.8
C09p02210 Brassica napus HOM05D003848 ORTHO05D004616 1.9e-60 237.7 407 59.5
PSO832G2619 Papaver somniferum HOM05D003848 ORTHO05D004616 2.5e-60 237.3 561 51.5
BcaC01g01554 Brassica carinata HOM05D003848 ORTHO05D004616 9.5e-60 235.3 134 87.3
C03p93070 Brassica napus HOM05D003848 ORTHO05D004616 2.1e-59 234.2 133 88.0
BolC3t21610H Brassica oleracea HOM05D003848 ORTHO05D004616 1.4e-58 231.5 126 88.9
BcaC01g01558 Brassica carinata HOM05D003848 ORTHO05D004616 4.0e-58 229.9 133 86.5
BraA04t17534Z Brassica rapa HOM05D003848 ORTHO05D004616 4.0e-58 229.9 171 72.5
A04p19390 Brassica napus HOM05D003848 ORTHO05D004616 2.0e-57 227.6 177 70.6
C09p02220 Brassica napus HOM05D003848 ORTHO05D004616 2.0e-57 227.6 160 74.4
TPR.G23082 Trifolium pratense HOM05D003848 ORTHO05D004616 3.4e-57 226.9 131 87.0
BcaC02g08380 Brassica carinata HOM05D003848 ORTHO05D004616 4.4e-57 226.5 175 70.3
A09p30470 Brassica napus HOM05D003848 ORTHO05D004616 2.9e-56 223.8 133 84.2
C04p54970 Brassica napus HOM05D003848 ORTHO05D004616 1.4e-55 221.5 173 69.9
BolC4t27032H Brassica oleracea HOM05D003848 ORTHO05D004616 1.4e-55 221.5 173 69.9
A09p54740 Brassica napus HOM05D003848 ORTHO05D004616 1.8e-55 221.1 407 45.7
Rhsim10G0030500 Rhododendron simsii HOM05D003848 ORTHO05D004616 4.1e-55 219.9 143 82.5
CDE07G1463 Ceratophyllum demersum HOM05D003848 ORTHO05D004616 6.2e-51 206.1 158 69.6
arahy.Tifrunner.gnm1.ann1.3GG3GM Arachis hypogaea HOM05D004461 ORTHO05D005543 5.8e-49 199.5 387 56.3
SalBow4G2167 Salvia bowleyana HOM05D003848 ORTHO05D004616 1.9e-47 194.5 177 61.6
Ca_04836_v3 Cicer arietinum L. HOM05D001515 ORTHO05D004616 1.5e-44 184.9 118 82.2
Nn4g26302 Nelumbo nucifera HOM05D003848 ORTHO05D004616 2.1e-43 181.0 102 90.2
SGA_v2.0_scaffold138G35328 Striga asiatica HOM05D003848 ORTHO05D004616 3.6e-43 180.3 164 62.8
C03p93140 Brassica napus HOM05D003848 ORTHO05D004616 1.1e-42 178.7 125 76.8
BcaC03g13677 Brassica carinata HOM05D003848 ORTHO05D004616 8.9e-42 175.6 133 72.2
Oeu017054.1 Olea europaea HOM05D004271 ORTHO05D006011 1.5e-41 174.9 132 72.7
MCO02G035 Micromonas commoda HOM05D003848 ORTHO05D004616 1.1e-39 168.7 106 80.2
BcaC03g16168 Brassica carinata HOM05D003848 ORTHO05D004616 7.1e-39 166.0 104 79.8
FAN22G1718 Fragaria x ananassa HOM05D003848 ORTHO05D004616 1.3e-37 161.8 429 60.4
Hma1.2p1_0667F.1_g199770 Hydrangea macrophylla HOM05D003848 ORTHO05D004616 5.6e-36 156.4 166 54.8
PRCOL_00001828 Prasinoderma coloniale HOM05D003848 ORTHO05D004616 1.4e-34 151.8 105 70.5
Cre01.g032250 Chlamydomonas reinhardtii HOM05D003848 ORTHO05D004616 6.8e-34 149.4 128 61.7
BraA09t40884Z Brassica rapa HOM05D003848 ORTHO05D004616 5.4e-31 139.8 85 82.4
BraA09t38617Z Brassica rapa HOM05D003848 ORTHO05D004616 3.5e-30 137.1 85 81.2
Os09g0455400 Oryza sativa ssp. japonica HOM05D003848 ORTHO05D004616 2.3e-29 134.4 70 94.3
Haze_27548 Corylus avellana HOM05D003848 ORTHO05D004616 1.9e-28 131.3 103 57.3
C02p39120 Brassica napus HOM05D003848 ORTHO05D004616 1.4e-26 125.2 86 73.3
Actinidia21120 Actinidia chinensis HOM05D003848 ORTHO05D004616 2.4e-26 124.4 166 50.6
BolC2t09922H Brassica oleracea HOM05D003848 ORTHO05D004616 4.0e-26 123.6 86 72.1
vmacro19512 Vaccinium macrocarpon HOM05D003848 ORTHO05D004616 1.5e-25 121.7 452 47.6
unitig_0.g1042 Utricularia gibba HOM05D003848 ORTHO05D004616 2.1e-22 111.3 64 84.4
BNapus_Darmor_BZH_scaffold_38p02460 Brassica napus HOM05D003848 ORTHO05D004616 2.7e-22 110.9 69 78.3
BNapus_Darmor_BZH_scaffold_38p02440 Brassica napus HOM05D003848 ORTHO05D004616 3.5e-22 110.5 69 81.2
FAN22G0082 Fragaria x ananassa HOM05D003848 ORTHO05D035678 4.6e-22 110.2 200 44.5
Ca_05843_v3 Cicer arietinum L. HOM05D003848 ORTHO05D004616 9.6e-20 102.4 52 94.2
MD07G1100600 Malus domestica HOM05D003848 ORTHO05D004616 2.8e-19 100.9 56 91.1
BolC2t06954H Brassica oleracea HOM05D003848 ORTHO05D004616 4.8e-19 100.1 69 76.8
Lj1A173G45 Lonicera japonica HOM05D003848 ORTHO05D004616 6.2e-19 99.8 157 48.4
Prupe.6G167600 Prunus persica HOM05D003848 ORTHO05D004616 9.9e-17 92.4 56 83.9
BcaC01g01557 Brassica carinata HOM05D003848 ORTHO05D004616 2.4e-15 87.8 58 74.1
C03p93060 Brassica napus HOM05D003848 ORTHO05D004616 7.1e-15 86.3 95 53.7
BraA09t40883Z Brassica rapa HOM05D003848 ORTHO05D004616 1.1e-12 79.0 66 66.7
BolC3t21614H Brassica oleracea HOM05D003848 ORTHO05D004616 2.4e-10 71.2 46 73.9
FvH4_2g11951 Fragaria vesca HOM05D003848 ORTHO05D035678 7.9e-06 56.2 57 56.1


User provided reference genes

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