Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 2.1e-112 409.1 207 100.0
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 4.6e-104 381.3 207 94.2
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 1.3e-58 230.3 215 64.2
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 1.7e-58 229.9 211 63.5
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 2.2e-58 229.6 212 64.6
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 3.8e-58 228.8 180 68.9
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 1.1e-57 227.3 215 61.9
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 1.1e-57 227.3 213 62.9
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 4.2e-57 225.3 212 64.2
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 1.2e-56 223.8 205 64.9
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 2.7e-56 222.6 218 62.4
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 1.4e-55 220.3 212 60.4
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.0e-55 219.2 209 64.6
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 3.0e-55 219.2 215 62.3
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 1.5e-54 216.9 216 58.3
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 2.0e-54 216.5 208 59.6
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 3.4e-54 215.7 206 62.1
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.4e-54 215.3 218 58.7
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 7.5e-54 214.5 204 61.3
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.7e-53 213.4 209 63.2
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 2.2e-53 213.0 216 57.9
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 2.8e-53 212.6 227 56.4
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 3.7e-53 212.2 204 60.8
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 3.7e-53 212.2 208 58.7
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 4.8e-53 211.8 214 60.7
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 4.8e-53 211.8 209 62.7
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 4.8e-53 211.8 210 60.0
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 6.3e-53 211.5 216 58.3
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 3.1e-52 209.1 215 60.0
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 7.0e-52 208.0 216 60.2
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 9.1e-52 207.6 210 60.5
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 1.6e-51 206.8 212 61.3
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 2.0e-51 206.5 206 59.2
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 2.0e-51 206.5 206 59.2
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 2.0e-51 206.5 207 62.3
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 2.7e-51 206.1 211 62.1
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 2.7e-51 206.1 214 59.3
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 3.5e-51 205.7 217 57.6
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 2.3e-50 203.0 211 62.6
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 6.5e-50 201.4 217 57.6
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 6.5e-50 201.4 212 57.5
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 6.5e-50 201.4 206 60.2
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 8.6e-50 201.1 208 60.6
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 1.1e-49 200.7 209 56.5
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 2.6e-46 189.5 206 57.3
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 4.4e-46 188.7 224 56.7
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 4.4e-46 188.7 209 58.9
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 5.7e-46 188.3 216 56.0
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 5.7e-46 188.3 207 58.0
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 9.8e-46 187.6 211 56.9
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 9.8e-46 187.6 206 55.8
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 1.7e-45 186.8 218 54.1
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 2.2e-45 186.4 209 56.5
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 2.8e-45 186.0 209 55.5
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 4.9e-45 185.3 216 52.3
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 8.3e-45 184.5 208 54.3
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.1e-44 184.1 211 54.5
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 1.1e-44 184.1 212 59.0
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 1.4e-44 183.7 216 53.2
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 1.8e-44 183.3 219 53.0
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 2.4e-44 183.0 211 55.5
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 2.4e-44 183.0 214 54.7
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 5.4e-44 181.8 211 54.0
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 7.0e-44 181.4 214 53.7
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 9.2e-44 181.0 210 55.2
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.2e-43 180.6 209 55.5
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.2e-43 180.6 213 56.3
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.0e-43 179.9 208 54.8
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 2.0e-43 179.9 206 55.8
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 2.7e-43 179.5 213 53.5
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 2.7e-43 179.5 211 58.8
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 7.8e-43 177.9 209 56.0
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 1.0e-42 177.6 209 55.5
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 1.3e-42 177.2 205 54.1
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.7e-42 176.8 213 56.3
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.7e-42 176.8 206 53.4
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 2.9e-42 176.0 236 54.2
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 3.8e-42 175.6 211 52.1
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 8.6e-42 174.5 217 50.2
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 8.6e-42 174.5 214 54.2
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 8.6e-42 174.5 206 54.9
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 2.5e-41 172.9 206 54.4
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 7.3e-41 171.4 213 58.2
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 1.2e-40 170.6 209 55.0
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 1.6e-40 170.2 209 55.0
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 1.6e-40 170.2 208 53.8
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.6e-40 170.2 213 53.5
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 4.7e-40 168.7 211 54.5
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.0e-39 167.5 209 52.6
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 1.8e-39 166.8 224 50.4
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 3.0e-39 166.0 209 54.5
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 3.0e-39 166.0 208 52.9
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 4.0e-39 165.6 213 53.1
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 6.8e-39 164.9 212 51.4
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 1.5e-38 163.7 198 56.6
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 2.6e-38 162.9 210 51.4
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 3.4e-38 162.5 207 51.2
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 4.4e-38 162.2 222 51.4
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 5.8e-38 161.8 209 50.2
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 7.5e-38 161.4 218 47.2
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 1.3e-37 160.6 207 49.8
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 2.9e-37 159.5 213 47.4
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 3.7e-37 159.1 215 47.0
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 1.1e-36 157.5 185 54.1
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 5.4e-36 155.2 218 46.3
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 7.0e-36 154.8 213 45.1
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 9.2e-36 154.5 215 46.5
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 1.6e-35 153.7 200 51.5
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 4.6e-35 152.1 207 51.7
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 7.8e-35 151.4 214 50.0
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 7.8e-35 151.4 222 53.6
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.0e-34 151.0 213 48.8
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 2.3e-34 149.8 209 49.3
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 2.3e-34 149.8 206 49.5
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 3.9e-34 149.1 223 45.7
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 3.9e-34 149.1 211 48.3
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 3.9e-34 149.1 174 54.0
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 5.0e-34 148.7 214 50.0
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 6.6e-34 148.3 242 45.0
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 1.1e-33 147.5 198 50.5
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 1.5e-33 147.1 214 49.5
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 1.9e-33 146.7 217 46.5
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 3.3e-33 146.0 210 49.5
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 2.8e-32 142.9 208 49.0
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 1.1e-31 141.0 214 48.6
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 1.4e-31 140.6 208 49.0
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 3.1e-31 139.4 207 47.8
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 3.1e-31 139.4 246 42.7
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 5.2e-31 138.7 222 50.0
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 8.9e-31 137.9 183 50.8
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 1.3e-29 134.0 208 46.6
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 6.4e-29 131.7 210 44.8
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 1.9e-28 130.2 300 35.7
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 2.7e-27 126.3 184 46.7
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 3.5e-27 125.9 206 44.7
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 1.0e-26 124.4 208 46.2
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 1.1e-23 114.4 207 43.0
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 1.8e-23 113.6 208 42.8
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 2.3e-23 113.2 207 42.0
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 6.8e-23 111.7 127 56.7
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 8.9e-23 111.3 167 46.1
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 2.0e-22 110.2 211 41.2
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 4.4e-22 109.0 153 47.7
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 5.8e-22 108.6 207 41.5
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 5.8e-22 108.6 207 41.5
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 2.9e-21 106.3 212 40.1
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 6.4e-21 105.1 200 42.0
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 2.4e-20 103.2 210 41.0
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 9.2e-20 101.3 185 42.7
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 2.1e-19 100.1 210 39.5
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 6.0e-19 98.6 276 34.1
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 7.8e-19 98.2 207 36.7
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 1.4e-15 87.4 164 43.3
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 5.2e-15 85.5 213 37.6
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 6.8e-15 85.1 213 37.6
VMungo1383G2032 Vigna mungo HOM05D004016 ORTHO05D004732 2.2e-13 80.1 117 51.3
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 2.2e-13 80.1 148 40.5
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 2.9e-13 79.7 201 38.8
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 8.4e-13 78.2 98 49.0
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 1.4e-12 77.4 81 60.5
Nn4g22231 Nelumbo nucifera HOM05D004016 ORTHO05D004732 1.4e-12 77.4 68 64.7
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 5.4e-12 75.5 84 54.8
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 8.7e-10 68.2 81 56.8
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 7.3e-09 65.1 58 62.1
VMungo0540G2292 Vigna mungo HOM05D004016 ORTHO05D004732 6.2e-08 62.0 102 47.1
SMO347G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 4.4e-06 55.8 87 40.2
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 5.8e-06 55.5 97 41.2
Gorai.009G455700 Gossypium raimondii HOM05D004016 ORTHO05D004732 7.6e-06 55.1 126 41.3


User provided reference genes

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