Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04636 Corylus avellana HOM05D007181 ORTHO05D008722 3.9e-111 404.8 208 100.0
Haze_04637 Corylus avellana HOM05D000129 ORTHO05D000144 1.3e-106 389.8 201 99.5
CiPaw.08G110300 Carya illinoinensis HOM05D007181 ORTHO05D008722 1.4e-63 246.9 196 67.3
Prupe.8G234100 Prunus persica HOM05D007181 ORTHO05D008722 6.8e-63 244.6 212 59.0
Potri.002G047400 Populus trichocarpa HOM05D007181 ORTHO05D008722 1.9e-57 226.5 207 55.1
Thecc.01G270500 Theobroma cacao HOM05D007181 ORTHO05D008722 7.3e-57 224.6 193 59.6
Duzib211G0516 Durio zibethinus HOM05D007181 ORTHO05D008722 1.6e-56 223.4 200 58.5
Ciclev10022317m.g Citrus clementina HOM05D007181 ORTHO05D008722 6.1e-56 221.5 204 58.3
Gorai.004G217700 Gossypium raimondii HOM05D007181 ORTHO05D008722 6.1e-56 221.5 200 54.0
RcHm_v2.0_Chr6g0289821 Rosa chinensis HOM05D007181 ORTHO05D008722 1.0e-55 220.7 210 54.3
Gohir.A05G078500 Gossypium hirsutum HOM05D000144 ORTHO05D008722 1.4e-55 220.3 195 51.3
MD03G1257200 Malus domestica HOM05D007181 ORTHO05D008722 8.9e-55 217.6 207 56.0
Atru.chr5.1530 Acer truncatum HOM05D007181 ORTHO05D008722 4.4e-54 215.3 203 58.1
Gorai.007G100900 Gossypium raimondii HOM05D007181 ORTHO05D008722 4.4e-54 215.3 200 53.0
Gohir.D11G094500 Gossypium hirsutum HOM05D007181 ORTHO05D008722 9.8e-54 214.2 200 53.5
arahy.Tifrunner.gnm1.ann1.M9RGYA Arachis hypogaea HOM05D007181 ORTHO05D008722 8.3e-53 211.1 189 54.0
CSS0010421 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 1.1e-52 210.7 206 50.0
Manes.05G082200 Manihot esculenta HOM05D007181 ORTHO05D008722 2.4e-52 209.5 204 54.4
Hma1.2p1_0760F.1_g214120 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 4.1e-52 208.8 209 52.2
CSS0018066 Camellia sinensis var. sinensis HOM05D007181 ORTHO05D008722 5.4e-52 208.4 202 51.0
Actinidia19968 Actinidia chinensis HOM05D007181 ORTHO05D008722 9.2e-52 207.6 195 53.8
MD11G1277900 Malus domestica HOM05D007181 ORTHO05D008722 2.0e-51 206.5 183 59.6
CANSAT25G0029 Cannabis sativa HOM05D007181 ORTHO05D008722 7.8e-51 204.5 204 48.5
Gohir.A08G187400 Gossypium hirsutum HOM05D007181 ORTHO05D008722 2.3e-50 203.0 200 50.5
Lj1g0009574 Lotus japonicus HOM05D007181 ORTHO05D008722 5.0e-50 201.8 195 53.8
Glyma.19G160000 Glycine max HOM05D007181 ORTHO05D008722 1.5e-49 200.3 204 53.9
Cpa.g.sc52.129 Carica papaya HOM05D007181 ORTHO05D008722 1.9e-49 199.9 208 54.8
Sabra02G0038300 Salix brachista HOM05D007181 ORTHO05D008722 3.3e-49 199.1 159 58.5
QL12p042395 Quercus lobata HOM05D007181 ORTHO05D008722 2.1e-48 196.4 195 59.0
Dinv32881 Davidia involucrata HOM05D007181 ORTHO05D008722 2.8e-48 196.1 213 52.1
FvH4_2g22890 Fragaria vesca HOM05D007181 ORTHO05D008722 3.6e-48 195.7 207 48.8
COL.COLO4_09179 Corchorus olitorius HOM05D007181 ORTHO05D008722 4.7e-48 195.3 188 56.4
Phvul.001G155300 Phaseolus vulgaris HOM05D007181 ORTHO05D008722 6.2e-48 194.9 206 50.0
VMungo1383G2224 Vigna mungo HOM05D007181 ORTHO05D008722 2.3e-47 193.0 206 50.0
Hma1.2p1_1332F.1_g276040 Hydrangea macrophylla HOM05D007181 ORTHO05D008722 6.8e-47 191.4 208 50.0
Gohir.D08G205700 Gossypium hirsutum HOM05D007181 ORTHO05D008722 9.8e-46 187.6 173 53.2
GSVIVG01003131001 Vitis vinifera HOM05D007181 ORTHO05D008722 1.7e-45 186.8 197 49.7
Medtr7g095740 Medicago truncatula HOM05D007181 ORTHO05D008722 4.9e-45 185.3 194 54.6
AUR62032277 Chenopodium quinoa HOM05D007181 ORTHO05D008722 6.0e-43 178.3 196 46.9
TPR.G19095 Trifolium pratense HOM05D007181 ORTHO05D008722 1.7e-42 176.8 194 51.0
Gohir.A11G090066 Gossypium hirsutum HOM05D007181 ORTHO05D008722 2.3e-42 176.4 179 49.2
Sed0014767 Sechium edule HOM05D007181 ORTHO05D008722 3.0e-42 176.0 191 53.9
AUR62011964 Chenopodium quinoa HOM05D007181 ORTHO05D008722 8.6e-42 174.5 204 45.1
PGSC0003DMG400004278 Solanum tuberosum HOM05D007181 ORTHO05D008722 1.9e-41 173.3 195 45.6
Aqoxy7G04176 Aquilegia oxysepala HOM05D007181 ORTHO05D008722 3.3e-41 172.6 193 48.7
ClCG07G000510 Citrullus lanatus HOM05D007181 ORTHO05D008722 3.3e-41 172.6 193 48.7
Nitab4.5_0003555g0080 Nicotiana tabacum HOM05D007181 ORTHO05D008722 1.6e-40 170.2 209 43.5
Sopen12g034950 Solanum pennellii HOM05D007181 ORTHO05D008722 4.7e-40 168.7 195 44.1
EL10Ac5g10486 Beta vulgaris HOM05D007181 ORTHO05D008722 1.1e-39 167.5 154 51.3
Solyc12g100320.2 Solanum lycopersicum HOM05D007181 ORTHO05D008722 1.4e-39 167.2 155 51.0
Nn8g40635 Nelumbo nucifera HOM05D007181 ORTHO05D008722 2.3e-39 166.4 200 44.5
Aa31LG10G17220 Aethionema arabicum HOM05D007181 ORTHO05D008722 6.8e-39 164.9 199 47.7
Nn8g40634 Nelumbo nucifera HOM05D007181 ORTHO05D008722 2.0e-38 163.3 200 43.5
HPP92_028259 Vanilla planifolia HOM05D007181 ORTHO05D008722 2.0e-38 163.3 133 54.9
MBI13_g01691_MAGBIO Magnolia biondii HOM05D007181 ORTHO05D008722 4.4e-38 162.2 195 45.6
PGR044G0699 Punica granatum HOM05D007181 ORTHO05D008722 5.8e-38 161.8 194 52.1
SGA_v2.0_scaffold1G00542 Striga asiatica HOM05D007181 ORTHO05D008722 2.2e-37 159.8 139 61.2
SalBow4G0298 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.4e-36 157.1 204 47.1
SalBow4G3342 Salvia bowleyana HOM05D007181 ORTHO05D008722 1.4e-36 157.1 204 47.1
vmacro02617 Vaccinium macrocarpon HOM05D007181 ORTHO05D008722 2.4e-36 156.4 198 43.9
CAN.G575.12 Capsicum annuum HOM05D007181 ORTHO05D008722 3.2e-36 156.0 207 41.1
Oeu025775.1 Olea europaea HOM05D007181 ORTHO05D008722 4.1e-36 155.6 138 55.1
Peaxi162Scf00146g10111 Petunia axillaris HOM05D007181 ORTHO05D008722 4.1e-36 155.6 205 42.0
SalBow6G6987 Salvia bowleyana HOM05D007181 ORTHO05D008722 4.1e-36 155.6 194 47.4
Ah.11g050140 Amaranthus hybridus HOM05D007181 ORTHO05D008722 5.4e-36 155.2 190 43.7
BcaC07g40807 Brassica carinata HOM05D007181 ORTHO05D008722 5.4e-36 155.2 154 49.4
C08p38020 Brassica napus HOM05D007181 ORTHO05D008722 5.4e-36 155.2 154 49.4
BolC8t51376H Brassica oleracea HOM05D007181 ORTHO05D008722 5.4e-36 155.2 154 49.4
MELO3C001156.2 Cucumis melo HOM05D007181 ORTHO05D008722 5.4e-36 155.2 142 58.5
THA.LOC104817569 Tarenaya hassleriana HOM05D007181 ORTHO05D008722 5.4e-36 155.2 195 46.7
BraA09t40915Z Brassica rapa HOM05D007181 ORTHO05D008722 1.6e-35 153.7 154 50.6
A09p55080 Brassica napus HOM05D007181 ORTHO05D008722 3.5e-35 152.5 148 52.0
Cc00_g18800 Coffea canephora HOM05D007181 ORTHO05D008722 3.5e-35 152.5 156 51.9
PSO210G2677 Papaver somniferum HOM05D007181 ORTHO05D008722 7.8e-35 151.4 147 49.0
Lj2P1163T10 Lonicera japonica HOM05D007181 ORTHO05D008722 1.0e-34 151.0 175 42.3
CDE06G2554 Ceratophyllum demersum HOM05D007181 ORTHO05D008722 1.3e-34 150.6 209 42.1
CsaV3_2G013840 Cucumis sativus L. HOM05D007181 ORTHO05D008722 1.7e-34 150.2 142 57.0
Rhsim13G0029700 Rhododendron simsii HOM05D007181 ORTHO05D008722 6.6e-34 148.3 191 44.5
Ca_20981_v3 Cicer arietinum L. HOM05D007181 ORTHO05D008722 1.2e-32 144.1 134 57.5
Lsat_1_v5_gn_5_185100 Lactuca sativa HOM05D007181 ORTHO05D008722 1.2e-32 144.1 141 53.2
Sc05g0001150 Simmondsia chinensis HOM05D007181 ORTHO05D008722 2.8e-32 142.9 211 43.6
Sp5g00160 Schrenkiella parvula HOM05D007181 ORTHO05D008722 1.2e-30 137.5 154 46.1
PSO210G2070 Papaver somniferum HOM05D007181 ORTHO05D008722 3.4e-30 136.0 147 44.9
SHI10021 Sapria himalayana HOM05D007181 ORTHO05D008722 3.4e-30 136.0 143 49.7
Carub.0005s3001 Capsella rubella HOM05D007181 ORTHO05D008722 7.6e-30 134.8 169 43.8
AT3G63390 Arabidopsis thaliana HOM05D007181 ORTHO05D008722 2.9e-29 132.9 177 47.5
Thhalv10006272m.g Eutrema salsugineum HOM05D007181 ORTHO05D008722 2.9e-29 132.9 135 50.4
BcaB03g13697 Brassica carinata HOM05D007181 ORTHO05D008722 4.9e-29 132.1 136 50.7
FAN24G0107 Fragaria x ananassa HOM05D007181 ORTHO05D008722 1.1e-28 131.0 170 43.5
AL5G46250 Arabidopsis lyrata HOM05D007181 ORTHO05D008722 5.4e-28 128.6 168 39.3
Os11g0616200 Oryza sativa ssp. japonica HOM05D007181 ORTHO05D008722 7.1e-28 128.3 186 46.2
SEGI_03897 Sequoiadendron giganteum HOM05D007181 ORTHO05D008722 1.6e-27 127.1 138 45.7
CARHR291580 Cardamine hirsuta HOM05D007181 ORTHO05D008722 2.3e-26 123.2 102 53.9
Pp3c24_16150 Physcomitrium patens HOM05D007181 ORTHO05D008722 1.9e-25 120.2 143 40.6
TAR624G0264 Trochodendron aralioides HOM05D007181 ORTHO05D008722 1.9e-25 120.2 221 36.7
VMungo1215G0236 Vigna mungo HOM05D007181 ORTHO05D008722 2.5e-25 119.8 126 47.6
HanXRQChr01g0005991 Helianthus annuus HOM05D007181 ORTHO05D008722 4.3e-25 119.0 141 49.6
Psat3g061320 Pisum sativum HOM05D007181 ORTHO05D008722 9.6e-25 117.9 200 42.0
SMO143G0136 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.6e-24 117.1 132 41.7
Zm00001eb166760 Zea mays HOM05D007181 ORTHO05D008722 3.1e-23 112.8 137 51.1
Pp3c8_19140 Physcomitrium patens HOM05D007181 ORTHO05D008722 7.6e-22 108.2 146 36.3
AagrBONN_evm.TU.Sc2ySwM_362.2054 Anthoceros agrestis HOM05D007181 ORTHO05D008722 3.8e-21 105.9 107 46.7
CiPaw.01G042700 Carya illinoinensis HOM05D007181 ORTHO05D008722 9.3e-20 101.3 103 65.0
Mapoly0126s0033 Marchantia polymorpha HOM05D007181 ORTHO05D008722 8.7e-18 94.7 106 44.3
BcaC07g42693 Brassica carinata HOM05D007181 ORTHO05D008722 3.3e-17 92.8 154 36.4
ATR0099G083 Amborella trichopoda HOM05D007181 ORTHO05D008722 8.4e-13 78.2 62 54.8
ATR0099G072 Amborella trichopoda HOM05D007181 ORTHO05D008722 2.7e-11 73.2 122 38.5
SMO203G0031 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.0e-10 71.2 60 45.0
CBR_g39816 Chara braunii HOM05D007181 ORTHO05D008722 5.1e-10 68.9 160 40.0
SMO203G0072 Selaginella moellendorffii HOM05D007181 ORTHO05D008722 1.4e-07 60.8 57 42.1


User provided reference genes

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