Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 3.5e-67 258.1 124 100.0
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 2.1e-64 248.8 124 98.4
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 2.6e-54 215.3 123 84.6
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 8.4e-53 210.3 124 83.1
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 9.3e-52 206.8 126 79.4
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 1.6e-51 206.1 127 81.1
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 3.5e-51 204.9 128 79.7
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 3.5e-51 204.9 118 82.2
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 4.6e-51 204.5 128 80.5
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 1.0e-50 203.4 128 81.2
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 1.3e-50 203.0 130 77.7
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 1.8e-50 202.6 124 77.4
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 3.0e-50 201.8 128 80.5
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 8.7e-50 200.3 124 79.0
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 1.5e-49 199.5 126 78.6
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 3.3e-49 198.4 128 78.9
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 3.3e-49 198.4 128 78.9
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 3.3e-49 198.4 124 79.8
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 4.3e-49 198.0 129 76.7
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 4.3e-49 198.0 127 77.2
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 5.7e-49 197.6 129 76.7
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 5.7e-49 197.6 129 76.0
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 5.7e-49 197.6 125 78.4
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 7.4e-49 197.2 129 76.0
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 9.7e-49 196.8 130 77.7
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 9.7e-49 196.8 128 78.1
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 9.7e-49 196.8 127 81.1
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 1.3e-48 196.4 125 80.0
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.2e-48 195.7 129 75.2
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 2.2e-48 195.7 129 76.0
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 8.2e-48 193.7 131 74.0
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.4e-47 193.0 129 74.4
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.4e-47 193.0 129 74.4
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 1.8e-47 192.6 129 76.0
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 2.4e-47 192.2 131 75.6
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 3.1e-47 191.8 126 77.0
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 3.1e-47 191.8 123 76.4
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 2.6e-46 188.7 131 74.0
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 3.4e-46 188.3 127 74.8
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 4.5e-46 188.0 131 74.0
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 1.0e-45 186.8 126 77.0
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 1.7e-45 186.0 124 76.6
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 8.5e-45 183.7 127 72.4
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 1.1e-44 183.3 130 73.1
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 1.4e-44 183.0 104 80.8
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 2.5e-44 182.2 125 75.2
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 4.2e-44 181.4 97 86.6
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 4.2e-44 181.4 105 81.0
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 5.5e-44 181.0 108 76.9
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 1.6e-43 179.5 128 71.9
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 2.1e-43 179.1 124 71.8
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 2.1e-43 179.1 125 72.8
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 4.6e-43 177.9 122 75.4
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 4.6e-43 177.9 168 59.5
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 7.9e-43 177.2 124 71.0
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 7.9e-43 177.2 124 71.0
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 1.0e-42 176.8 122 75.4
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.0e-42 176.8 124 71.0
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 1.4e-42 176.4 125 72.8
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.4e-42 176.4 124 70.2
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 1.8e-42 176.0 124 70.2
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 2.3e-42 175.6 125 72.0
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 2.3e-42 175.6 125 72.0
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 2.3e-42 175.6 123 69.1
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 3.9e-42 174.9 128 71.9
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 5.1e-42 174.5 126 65.9
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 6.7e-42 174.1 127 71.7
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 8.8e-42 173.7 124 70.2
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 8.8e-42 173.7 141 66.0
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 1.1e-41 173.3 126 71.4
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 1.5e-41 172.9 124 69.4
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 2.0e-41 172.6 124 71.0
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 3.3e-41 171.8 124 71.0
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 4.3e-41 171.4 124 73.4
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 5.7e-41 171.0 124 70.2
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 1.3e-40 169.9 120 70.0
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 2.8e-40 168.7 125 68.0
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 2.8e-40 168.7 124 70.2
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 2.8e-40 168.7 124 67.7
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 1.1e-39 166.8 126 67.5
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 1.1e-39 166.8 133 68.4
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 1.4e-39 166.4 124 69.4
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 1.4e-39 166.4 124 68.5
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 4.1e-39 164.9 114 71.1
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 4.1e-39 164.9 125 67.2
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 5.3e-39 164.5 124 65.3
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 5.3e-39 164.5 124 67.7
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 6.9e-39 164.1 124 68.5
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 9.1e-39 163.7 130 66.9
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 1.5e-38 162.9 122 66.4
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 5.9e-38 161.0 126 66.7
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 3.8e-37 158.3 128 64.8
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 5.0e-37 157.9 115 70.4
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 1.4e-36 156.4 105 78.1
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 1.9e-36 156.0 109 70.6
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 5.5e-36 154.5 126 64.3
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 9.4e-36 153.7 105 75.2
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 9.4e-36 153.7 124 62.1
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 1.2e-35 153.3 131 59.5
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 1.6e-35 152.9 124 64.5
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 6.1e-35 151.0 123 60.2
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 1.0e-34 150.2 136 64.0
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 1.1e-31 140.2 103 70.9
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 1.9e-28 129.4 128 59.4
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 3.3e-25 118.6 71 76.1
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 7.5e-25 117.5 125 52.8
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 1.7e-24 116.3 128 52.3
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 1.7e-24 116.3 128 52.3
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 2.8e-24 115.5 112 56.2
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 6.3e-24 114.4 91 70.3
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 7.0e-23 110.9 81 75.3
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.0e-18 97.1 116 44.0
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 7.5e-17 90.9 114 41.2
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 1.3e-13 80.1 125 37.6
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 3.4e-09 65.5 126 34.1
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 3.1e-07 58.9 50 68.0


User provided reference genes

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