Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04563 Corylus avellana HOM05D003846 ORTHO05D009922 5.6e-37 157.1 82 100.0
CiPaw.07G080900 Carya illinoinensis HOM05D007881 ORTHO05D009922 1.3e-09 66.2 44 75.0
Cfa019801 Carpinus fangiana HOM05D003846 ORTHO05D004726 5.5e-08 60.8 62 53.2
Haze_18631 Corylus avellana HOM05D003846 ORTHO05D004726 7.1e-08 60.5 62 53.2
CiPaw.15G127700 Carya illinoinensis HOM05D003846 ORTHO05D004726 2.1e-07 58.9 31 80.6
QL10p023733 Quercus lobata HOM05D003846 ORTHO05D004726 3.5e-07 58.2 61 52.5
QL12p018644 Quercus lobata HOM05D007881 ORTHO05D009922 3.5e-07 58.2 49 65.3
CiPaw.16G084800 Carya illinoinensis HOM05D003846 ORTHO05D004726 6.1e-07 57.4 31 83.9
PSO063G1115 Papaver somniferum HOM05D003846 ORTHO05D004726 1.0e-06 56.6 31 80.6
TAR374G1390 Trochodendron aralioides HOM05D003846 ORTHO05D004726 1.0e-06 56.6 31 80.6
CSS0009272 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 1.3e-06 56.2 31 80.6
MELO3C002078.2 Cucumis melo HOM05D003846 ORTHO05D004726 1.3e-06 56.2 62 46.8
PSO782G3649 Papaver somniferum HOM05D003846 ORTHO05D004726 1.3e-06 56.2 31 80.6
CSS0028088 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 1.8e-06 55.8 31 80.6
CSS0029565 Camellia sinensis var. sinensis HOM05D003846 ORTHO05D004726 1.8e-06 55.8 31 80.6
Actinidia39818 Actinidia chinensis HOM05D003846 ORTHO05D004726 2.3e-06 55.5 53 52.8
Manes.06G071100 Manihot esculenta HOM05D003846 ORTHO05D004726 2.3e-06 55.5 31 77.4
Actinidia31024 Actinidia chinensis HOM05D003846 ORTHO05D004726 3.0e-06 55.1 31 77.4
MBI19_g21095_MAGBIO Magnolia biondii HOM05D003846 ORTHO05D004726 3.0e-06 55.1 31 77.4
TAR622G0464 Trochodendron aralioides HOM05D003846 ORTHO05D004726 3.0e-06 55.1 31 77.4
Solyc03g119700.3 Solanum lycopersicum HOM05D003846 ORTHO05D004726 3.9e-06 54.7 31 77.4
Sopen03g038530 Solanum pennellii HOM05D003846 ORTHO05D004726 3.9e-06 54.7 31 77.4
ATR0665G367 Amborella trichopoda HOM05D003846 ORTHO05D004726 5.1e-06 54.3 33 69.7
ClCG04G011240 Citrullus lanatus HOM05D003846 ORTHO05D004726 5.1e-06 54.3 33 69.7
CsaV3_1G006510 Cucumis sativus L. HOM05D003846 ORTHO05D004726 5.1e-06 54.3 62 45.2
Lalb_Chr14g0371301 Lupinus albus HOM05D003846 ORTHO05D004726 5.1e-06 54.3 31 71.0
Manes.14G098800 Manihot esculenta HOM05D003846 ORTHO05D004726 5.1e-06 54.3 31 77.4
PGSC0003DMG400005627 Solanum tuberosum HOM05D003846 ORTHO05D004726 5.1e-06 54.3 31 77.4
Nitab4.5_0001599g0080 Nicotiana tabacum HOM05D003846 ORTHO05D004726 6.7e-06 53.9 28 82.1
Nitab4.5_0010565g0020 Nicotiana tabacum HOM05D003846 ORTHO05D004726 6.7e-06 53.9 28 82.1
Peaxi162Scf00015g00824 Petunia axillaris HOM05D003846 ORTHO05D004726 6.7e-06 53.9 28 82.1
Dinv21120 Davidia involucrata HOM05D003846 ORTHO05D004726 8.7e-06 53.5 33 69.7
Phvul.003G028500 Phaseolus vulgaris HOM05D003846 ORTHO05D004726 8.7e-06 53.5 29 82.8


User provided reference genes

Program Settings