Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 9.0e-41 169.9 88 100.0
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 2.3e-36 155.2 88 88.6
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 2.1e-34 148.7 88 85.2
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 1.1e-33 146.4 88 86.4
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 2.4e-33 145.2 88 83.0
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 5.3e-33 144.1 88 83.0
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 9.0e-33 143.3 88 80.7
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 1.2e-32 142.9 89 80.9
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 1.5e-32 142.5 87 80.5
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 3.4e-32 141.4 88 81.8
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 4.5e-32 141.0 88 83.0
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 9.9e-32 139.8 88 81.8
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 1.7e-31 139.0 88 79.5
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 1.7e-31 139.0 88 79.5
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 2.2e-31 138.7 88 80.7
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 2.2e-31 138.7 88 81.8
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 6.4e-31 137.1 88 77.3
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.1e-30 136.3 88 79.5
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.1e-30 136.3 88 79.5
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 1.4e-30 136.0 84 81.0
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 3.2e-30 134.8 88 76.1
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 3.2e-30 134.8 90 78.9
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 5.5e-30 134.0 84 79.8
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 1.2e-29 132.9 88 79.5
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 1.6e-29 132.5 88 77.3
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 3.5e-29 131.3 87 79.3
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 7.9e-29 130.2 81 81.5
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 2.3e-28 128.6 101 70.3
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 3.0e-28 128.3 88 72.7
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 3.9e-28 127.9 81 80.2
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 6.7e-28 127.1 88 71.6
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 1.9e-27 125.6 81 81.5
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 2.5e-27 125.2 79 78.5
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 3.3e-27 124.8 81 74.1
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 4.3e-27 124.4 89 73.0
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 4.3e-27 124.4 88 69.3
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 7.4e-27 123.6 88 75.0
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 1.3e-26 122.9 89 74.2
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 2.8e-26 121.7 77 80.5
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 2.8e-26 121.7 81 77.8
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 6.2e-26 120.6 88 65.9
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 1.4e-25 119.4 81 71.6
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 5.3e-25 117.5 103 64.1
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 9.0e-25 116.7 84 69.0
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 2.0e-24 115.5 84 66.7
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 2.0e-24 115.5 84 67.9
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 2.6e-24 115.2 84 66.7
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 2.6e-24 115.2 84 67.9
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 2.6e-24 115.2 80 73.8
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 7.6e-24 113.6 84 66.7
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 1.0e-23 113.2 83 69.9
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 1.4e-22 109.4 81 66.7
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 3.2e-22 108.2 84 63.1
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 3.2e-22 108.2 84 63.1
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 9.3e-22 106.7 84 61.9
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 9.3e-22 106.7 85 60.0
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 1.2e-21 106.3 87 64.4
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 1.6e-21 105.9 84 60.7
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 1.6e-21 105.9 84 60.7
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 2.7e-21 105.1 117 54.7
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 3.5e-21 104.8 84 58.3
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 6.1e-21 104.0 69 76.8
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 1.3e-20 102.8 79 68.4
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 2.3e-20 102.1 79 65.8
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 3.9e-20 101.3 84 58.3
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 3.9e-20 101.3 84 57.1
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 2.2e-18 95.5 129 46.5
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 2.8e-18 95.1 86 51.2
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 1.1e-17 93.2 85 58.8
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 5.0e-15 84.3 86 55.8
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 2.1e-13 79.0 80 51.2
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 4.6e-13 77.8 48 81.2
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 6.1e-13 77.4 42 90.5
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 3.3e-11 71.6 50 74.0
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 7.4e-11 70.5 49 67.3
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 1.7e-10 69.3 50 70.0
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 8.2e-10 67.0 44 72.7
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 2.6e-08 62.0 58 55.2
ATR0609G113 Amborella trichopoda HOM05D008013 ORTHO05D010149 9.4e-06 53.5 50 46.0
Eucgr.B01381 Eucalyptus grandis HOM05D008013 ORTHO05D010149 9.4e-06 53.5 80 42.5


User provided reference genes

Program Settings