Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 6.4e-105 384.0 187 100.0
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 1.0e-54 217.2 112 92.0
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 2.8e-44 182.6 145 65.5
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 3.7e-44 182.2 113 77.9
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 1.1e-43 180.6 107 80.4
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.6e-42 176.8 146 61.6
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 2.1e-39 166.4 146 58.9
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 2.1e-39 166.4 146 57.5
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 4.7e-39 165.2 146 56.8
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 1.4e-38 163.7 148 56.8
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 3.0e-38 162.5 143 57.3
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 2.0e-37 159.8 148 55.4
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 2.0e-37 159.8 148 55.4
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 2.6e-37 159.5 144 56.9
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 7.5e-37 157.9 147 57.8
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 1.7e-36 156.8 152 55.9
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 3.7e-36 155.6 147 56.5
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 6.4e-36 154.8 145 58.6
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 6.4e-36 154.8 148 52.7
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 8.3e-36 154.5 111 66.7
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 1.4e-35 153.7 146 54.8
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 1.8e-35 153.3 146 56.2
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 5.4e-35 151.8 112 66.1
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 4.6e-34 148.7 112 66.1
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 4.6e-34 148.7 146 52.7
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 4.6e-34 148.7 144 54.2
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 7.8e-34 147.9 152 53.3
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 1.0e-33 147.5 145 53.8
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 1.7e-33 146.7 110 66.4
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 1.7e-33 146.7 149 53.0
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 3.0e-33 146.0 147 55.1
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 8.6e-33 144.4 145 53.1
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 2.5e-32 142.9 143 55.2
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 4.7e-31 138.7 148 53.4
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 8.0e-31 137.9 144 50.7
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 8.0e-31 137.9 110 60.9
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 1.8e-30 136.7 145 51.0
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 2.3e-30 136.3 147 49.0
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 6.8e-30 134.8 108 61.1
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 2.6e-29 132.9 165 47.9
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 2.6e-29 132.9 108 62.0
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 7.5e-29 131.3 148 50.7
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 3.7e-28 129.0 117 58.1
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 6.4e-28 128.3 150 43.3
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.4e-27 127.1 143 50.3
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 2.4e-27 126.3 141 48.9
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 9.2e-27 124.4 141 48.2
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 1.2e-26 124.0 147 47.6
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 2.0e-26 123.2 105 57.1
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 7.8e-26 121.3 141 47.5
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 7.8e-26 121.3 141 47.5
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 7.8e-26 121.3 143 46.9
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 1.7e-25 120.2 140 47.9
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 2.3e-25 119.8 141 46.8
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 3.0e-25 119.4 114 52.6
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 1.9e-24 116.7 103 62.1
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 5.6e-24 115.2 149 46.3
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 5.6e-24 115.2 149 47.0
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 7.3e-24 114.8 108 57.4
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 9.5e-24 114.4 146 44.5
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 1.2e-23 114.0 152 42.8
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 1.6e-23 113.6 143 45.5
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 3.6e-23 112.5 146 43.8
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 3.6e-23 112.5 145 42.8
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 2.3e-22 109.8 105 53.3
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 4.0e-22 109.0 106 51.9
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 5.2e-22 108.6 91 57.1
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 6.8e-22 108.2 158 43.0
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 8.9e-22 107.8 137 46.0
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 1.2e-21 107.5 113 52.2
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 1.7e-20 103.6 151 42.4
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 2.2e-20 103.2 147 42.9
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 3.7e-20 102.4 149 40.3
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 4.9e-20 102.1 111 50.5
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 4.9e-20 102.1 143 42.7
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 4.9e-20 102.1 143 42.7
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 4.9e-20 102.1 143 42.7
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 4.9e-20 102.1 142 38.0
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 8.3e-20 101.3 143 42.0
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 4.1e-19 99.0 106 48.1
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 6.0e-18 95.1 104 48.1
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 6.0e-18 95.1 146 40.4
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 1.3e-17 94.0 145 41.4
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 1.7e-17 93.6 140 40.0
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 3.0e-17 92.8 143 40.6
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 3.3e-16 89.4 112 44.6
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 5.6e-16 88.6 144 40.3
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 7.3e-16 88.2 105 46.7
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 1.6e-15 87.0 104 49.0
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 4.7e-15 85.5 168 35.7
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.1e-14 84.3 77 51.9
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 4.0e-14 82.4 115 45.2
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 4.4e-13 79.0 150 37.3
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 4.1e-11 72.4 108 40.7
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 6.0e-10 68.6 49 69.4
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 9.6e-08 61.2 112 32.1
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 9.6e-08 61.2 36 75.0
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 9.6e-08 61.2 108 32.4


User provided reference genes

Program Settings