Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04490 Corylus avellana HOM05D030883 ORTHO05D163930 3.6e-47 191.0 85 100.0
Haze_01794 Corylus avellana HOM05D030883 ORTHO05D164627 2.0e-13 79.0 50 74.0
Haze_01796 Corylus avellana HOM05D030883 ORTHO05D163719 2.0e-13 79.0 50 74.0
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 9.4e-11 70.1 57 63.2
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 9.4e-11 70.1 57 63.2
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 2.1e-10 68.9 30 96.7
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 2.1e-10 68.9 57 61.4
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 2.7e-10 68.6 30 96.7
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 4.6e-10 67.8 71 50.7
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 4.6e-10 67.8 57 61.4
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 1.4e-09 66.2 30 93.3
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 2.3e-09 65.5 71 49.3
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 2.3e-09 65.5 57 61.4
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 3.0e-09 65.1 57 59.6
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 3.9e-09 64.7 30 90.0
Eucgr.A02780 Eucalyptus grandis HOM05D001607 ORTHO05D001893 3.9e-09 64.7 30 90.0
Haze_01790 Corylus avellana HOM05D030883 ORTHO05D165049 5.1e-09 64.3 80 43.8
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 5.1e-09 64.3 57 57.9
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 5.1e-09 64.3 30 86.7
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
BcaC09g51300 Brassica carinata HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
A01p12270 Brassica napus HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
C01p14680 Brassica napus HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
BolC1t01419H Brassica oleracea HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
BraA01t01171Z Brassica rapa HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 8.8e-09 63.5 30 86.7
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 1.1e-08 63.2 30 86.7
BcaNung04146 Brassica carinata HOM05D001607 ORTHO05D001893 1.1e-08 63.2 30 86.7
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.1e-08 63.2 57 56.1
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 1.1e-08 63.2 30 83.3
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 1.1e-08 63.2 54 59.3
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 1.1e-08 63.2 30 86.7
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 1.1e-08 63.2 30 86.7
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 1.1e-08 63.2 30 86.7
TPR.G26981 Trifolium pratense HOM05D001607 ORTHO05D001893 1.1e-08 63.2 57 59.6
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 1.5e-08 62.8 30 83.3
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 1.5e-08 62.8 30 86.7
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 1.9e-08 62.4 30 86.7
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 1.9e-08 62.4 57 52.6
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 1.9e-08 62.4 30 86.7
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.9e-08 62.4 57 57.9
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 2.5e-08 62.0 30 83.3
Ca_14559_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 4.3e-08 61.2 39 66.7
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 4.3e-08 61.2 30 83.3
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 4.3e-08 61.2 30 83.3
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 7.4e-08 60.5 57 50.9
BraA03t14327Z Brassica rapa HOM05D001607 ORTHO05D001893 7.4e-08 60.5 30 83.3
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 7.4e-08 60.5 30 83.3
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 7.4e-08 60.5 30 83.3
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 7.4e-08 60.5 30 83.3
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 7.4e-08 60.5 30 83.3
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 7.4e-08 60.5 30 83.3
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 7.4e-08 60.5 57 56.1
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 7.4e-08 60.5 30 83.3
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 9.7e-08 60.1 30 80.0
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 9.7e-08 60.1 30 80.0
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 9.7e-08 60.1 29 86.2
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 1.3e-07 59.7 30 83.3
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 1.3e-07 59.7 30 83.3
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 1.3e-07 59.7 30 83.3
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 1.3e-07 59.7 30 83.3
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 1.3e-07 59.7 30 83.3
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 1.3e-07 59.7 30 83.3
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 1.7e-07 59.3 30 83.3
Cpa.g.sc107.66 Carica papaya HOM05D001607 ORTHO05D001893 2.2e-07 58.9 30 80.0
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.2e-07 58.9 30 80.0
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.2e-07 58.9 30 80.0
Lsat_1_v5_gn_8_8420 Lactuca sativa HOM05D001607 ORTHO05D001893 2.2e-07 58.9 30 80.0
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 2.2e-07 58.9 30 83.3
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 2.2e-07 58.9 30 80.0
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 2.8e-07 58.5 30 80.0
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 2.8e-07 58.5 30 80.0
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 2.8e-07 58.5 30 83.3
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 2.8e-07 58.5 30 83.3
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 2.8e-07 58.5 30 80.0
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 3.7e-07 58.2 30 83.3
ECA233G5223 Erigeron canadensis HOM05D001607 ORTHO05D001893 3.7e-07 58.2 30 80.0
SGA_v2.0_scaffold60G21061 Striga asiatica HOM05D001607 ORTHO05D001893 3.7e-07 58.2 30 80.0
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 4.8e-07 57.8 30 76.7
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 6.3e-07 57.4 30 80.0
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 8.2e-07 57.0 30 80.0
Actinidia27741 Actinidia chinensis HOM05D001607 ORTHO05D001893 8.2e-07 57.0 30 80.0
Actinidia28326 Actinidia chinensis HOM05D001607 ORTHO05D001893 8.2e-07 57.0 30 80.0
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 8.2e-07 57.0 30 80.0
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 8.2e-07 57.0 30 83.3
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 8.2e-07 57.0 30 80.0
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 8.2e-07 57.0 43 60.5
HanXRQChr10g0304171 Helianthus annuus HOM05D001607 ORTHO05D001893 8.2e-07 57.0 30 76.7
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 8.2e-07 57.0 30 76.7
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 8.2e-07 57.0 30 80.0
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.1e-06 56.6 30 80.0
SEGI_31249 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 1.1e-06 56.6 30 73.3
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 1.1e-06 56.6 30 80.0
Peaxi162Scf00444g00720 Petunia axillaris HOM05D001607 ORTHO05D001893 1.4e-06 56.2 30 73.3
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 1.4e-06 56.2 30 76.7
Solyc03g025610.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 1.4e-06 56.2 57 49.1
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 1.8e-06 55.8 30 80.0
CDE08G0131 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 1.8e-06 55.8 36 69.4
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 1.8e-06 55.8 30 80.0
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 1.8e-06 55.8 30 80.0
Nitab4.5_0001842g0120 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.8e-06 55.8 30 73.3
Oeu045396.1 Olea europaea HOM05D001607 ORTHO05D001893 1.8e-06 55.8 30 73.3
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 2.4e-06 55.5 30 76.7
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 2.4e-06 55.5 30 80.0
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 3.1e-06 55.1 30 76.7
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 3.1e-06 55.1 30 76.7
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 3.1e-06 55.1 30 76.7
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 3.1e-06 55.1 30 73.3
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 4.1e-06 54.7 30 80.0
Gohir.D08G110724 Gossypium hirsutum HOM05D001607 ORTHO05D001893 4.1e-06 54.7 30 80.0
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 5.3e-06 54.3 30 76.7
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 5.3e-06 54.3 30 76.7
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 5.3e-06 54.3 30 73.3
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 5.3e-06 54.3 57 50.9
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 6.9e-06 53.9 29 79.3
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 6.9e-06 53.9 30 76.7
Lsat_1_v5_gn_3_118641 Lactuca sativa HOM05D001607 ORTHO05D014307 9.1e-06 53.5 44 54.5


User provided reference genes

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