Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.3e-152 543.1 288 100.0
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 4.0e-98 362.1 320 67.8
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 2.5e-84 316.2 305 63.0
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 3.7e-83 312.4 300 64.3
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 3.7e-83 312.4 305 63.6
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 1.7e-80 303.5 307 62.2
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 2.9e-80 302.8 304 61.5
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 2.5e-79 299.7 309 61.2
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 4.6e-78 295.4 312 62.8
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 1.0e-77 294.3 308 60.1
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 6.7e-77 291.6 314 60.2
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 8.7e-77 291.2 307 58.6
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 8.7e-77 291.2 312 59.3
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 2.5e-76 289.7 307 58.3
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 2.5e-76 289.7 307 59.6
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 7.4e-76 288.1 271 61.3
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 2.2e-75 286.6 309 58.6
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.8e-75 286.2 307 59.6
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 3.7e-75 285.8 307 59.6
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 3.7e-75 285.8 315 60.6
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 6.3e-75 285.0 307 59.6
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 2.4e-74 283.1 311 59.5
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 3.4e-73 279.3 292 59.2
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 5.9e-73 278.5 304 58.9
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 7.7e-73 278.1 282 62.1
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 7.7e-73 278.1 282 62.1
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 1.3e-72 277.3 309 58.6
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 1.7e-72 276.9 308 58.8
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 1.1e-71 274.2 293 58.0
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 9.4e-71 271.2 310 56.5
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 2.7e-70 269.6 311 59.2
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 2.7e-70 269.6 294 57.5
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 3.6e-70 269.2 300 56.7
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 4.6e-70 268.9 295 57.6
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 1.0e-69 267.7 289 59.2
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 2.3e-69 266.5 319 57.4
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 8.8e-69 264.6 291 57.0
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 1.1e-68 264.2 311 54.7
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 1.1e-68 264.2 324 53.7
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 2.0e-68 263.5 245 67.8
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 2.0e-68 263.5 287 58.2
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 2.6e-68 263.1 311 55.0
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 7.4e-68 261.5 316 55.7
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 9.7e-68 261.2 287 58.2
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 1.3e-67 260.8 300 58.0
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 2.8e-67 259.6 310 55.2
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 6.3e-67 258.5 304 55.3
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 2.4e-66 256.5 307 53.1
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 5.3e-66 255.4 306 55.9
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 6.9e-66 255.0 295 55.6
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 2.0e-65 253.4 289 56.7
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 1.0e-64 251.1 310 52.9
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 1.3e-64 250.8 305 53.8
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 2.2e-64 250.0 293 55.3
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 5.0e-64 248.8 365 49.9
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 1.1e-63 247.7 213 64.8
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 1.4e-63 247.3 303 53.5
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 1.9e-63 246.9 309 55.0
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 2.5e-63 246.5 298 54.0
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 4.2e-63 245.7 277 57.4
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 4.2e-63 245.7 288 57.6
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 1.2e-62 244.2 303 51.8
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 2.1e-62 243.4 267 57.3
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 2.7e-62 243.0 312 51.9
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 3.6e-62 242.7 298 52.3
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 5.2e-61 238.8 305 51.1
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 5.2e-61 238.8 305 51.1
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 8.8e-61 238.0 309 52.4
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.1e-60 237.7 325 49.5
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 1.5e-60 237.3 305 51.1
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 2.0e-60 236.9 305 51.1
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.6e-60 236.5 325 49.5
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 2.6e-60 236.5 324 50.6
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 3.3e-60 236.1 325 50.2
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 5.7e-60 235.3 306 50.7
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 7.4e-60 235.0 325 49.2
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 9.7e-60 234.6 216 60.6
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 1.3e-59 234.2 306 52.3
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 1.7e-59 233.8 308 51.3
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 1.7e-59 233.8 307 51.5
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 2.2e-59 233.4 307 52.1
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 9.1e-58 228.0 307 51.1
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 1.6e-57 227.3 302 50.7
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 1.3e-56 224.2 252 54.4
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 3.2e-55 219.5 225 56.4
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 5.5e-55 218.8 301 50.2
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 2.7e-54 216.5 210 61.4
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 8.8e-53 211.5 276 47.5
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 2.0e-52 210.3 254 49.2
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 5.7e-52 208.8 138 79.0
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 6.3e-51 205.3 252 57.9
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 1.4e-50 204.1 151 73.5
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 2.4e-50 203.4 221 56.6
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 7.0e-50 201.8 320 46.6
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 2.9e-48 196.4 268 46.6
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 4.4e-44 182.6 219 53.0
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 1.7e-43 180.6 274 47.1
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 3.6e-38 162.9 132 68.2
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 3.4e-36 156.4 118 72.0
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 7.5e-36 155.2 211 46.9
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 1.1e-34 151.4 304 39.1
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.4e-34 150.2 115 67.8
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 2.1e-30 137.1 117 64.1
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 8.0e-30 135.2 120 60.0
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 1.4e-29 134.4 117 64.1
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 7.5e-28 128.6 270 35.6
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 2.9e-27 126.7 198 51.5
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 2.3e-24 117.1 255 35.7
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 6.6e-24 115.5 110 66.4
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 8.0e-22 108.6 117 59.0
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 1.6e-17 94.4 180 38.9
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 3.5e-17 93.2 180 41.1
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 1.3e-16 91.3 118 55.1
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 5.0e-16 89.4 201 37.8
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 5.6e-15 85.9 117 53.0
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 2.8e-14 83.6 120 50.0
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.7e-11 73.2 133 38.3
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 1.6e-09 67.8 50 66.0
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.6e-09 67.8 50 66.0
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 3.0e-08 63.5 55 63.6
FAN16G0199 Fragaria x ananassa HOM05D000780 ORTHO05D210745 4.7e-06 56.2 55 50.9


User provided reference genes

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