Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04466 Corylus avellana HOM05D006721 ORTHO05D000476 1.6e-56 222.6 117 100.0
QL01p041965 Quercus lobata HOM05D006721 ORTHO05D000476 8.2e-50 200.3 116 88.8
QL03p032184 Quercus lobata HOM05D006721 ORTHO05D000476 5.3e-49 197.6 116 87.9
QL03p032281 Quercus lobata HOM05D006721 ORTHO05D000476 5.3e-49 197.6 116 87.9
CiPaw.07G077700 Carya illinoinensis HOM05D006721 ORTHO05D000476 4.0e-44 181.4 113 85.0
Atru.chr2.886 Acer truncatum HOM05D006721 ORTHO05D000476 4.8e-42 174.5 114 82.5
Glyma.03G251900 Glycine max HOM05D006721 ORTHO05D000476 6.3e-42 174.1 117 78.6
Manes.09G149900 Manihot esculenta HOM05D006721 ORTHO05D000476 1.1e-41 173.3 115 80.0
Ciclev10022930m.g Citrus clementina HOM05D006721 ORTHO05D000476 5.4e-41 171.0 114 81.6
Potri.019G014100 Populus trichocarpa HOM05D006721 ORTHO05D000476 5.4e-41 171.0 114 82.5
Lalb_Chr04g0262001 Lupinus albus HOM05D006721 ORTHO05D000476 7.0e-41 170.6 117 76.9
Lj1g0023872 Lotus japonicus HOM05D006721 ORTHO05D000476 7.7e-40 167.2 114 78.9
Phvul.006G106600 Phaseolus vulgaris HOM05D006721 ORTHO05D000476 7.7e-40 167.2 117 76.1
COL.COLO4_15417 Corchorus olitorius HOM05D006721 ORTHO05D000476 2.3e-39 165.6 114 73.7
PGR142G1199 Punica granatum HOM05D006721 ORTHO05D000476 2.3e-39 165.6 117 76.9
Eucgr.B02129 Eucalyptus grandis HOM05D006721 ORTHO05D000476 2.9e-39 165.2 115 75.7
THA.LOC104808031 Tarenaya hassleriana HOM05D006721 ORTHO05D000476 2.9e-39 165.2 115 76.5
Gohir.A13G168900 Gossypium hirsutum HOM05D006721 ORTHO05D000476 3.8e-39 164.9 114 74.6
Gohir.D13G174300 Gossypium hirsutum HOM05D006721 ORTHO05D000476 3.8e-39 164.9 114 74.6
Gorai.013G186500 Gossypium raimondii HOM05D006721 ORTHO05D000476 3.8e-39 164.9 114 74.6
Medtr7g116300 Medicago truncatula HOM05D006721 ORTHO05D000476 6.6e-39 164.1 111 77.5
CsaV3_2G003760 Cucumis sativus L. HOM05D006721 ORTHO05D000476 8.6e-39 163.7 113 74.3
Dinv14631 Davidia involucrata HOM05D006721 ORTHO05D000476 8.6e-39 163.7 111 77.5
TWI56G0396 Tripterygium wilfordii HOM05D006721 ORTHO05D000476 1.5e-38 162.9 115 75.7
Cfa006323 Carpinus fangiana HOM05D006721 ORTHO05D000476 4.2e-38 161.4 90 96.7
TPR.G6950 Trifolium pratense HOM05D006721 ORTHO05D000476 5.5e-38 161.0 111 75.7
GSVIVG01036217001 Vitis vinifera HOM05D006721 ORTHO05D000476 5.5e-38 161.0 113 77.9
Sabra19G0016300 Salix brachista HOM05D006721 ORTHO05D000476 7.2e-38 160.6 114 78.1
Sabra19G0026800 Salix brachista HOM05D006721 ORTHO05D000476 7.2e-38 160.6 114 78.1
Psat3g006080 Pisum sativum HOM05D006721 ORTHO05D000476 9.5e-38 160.2 111 74.8
Sed0018278 Sechium edule HOM05D006721 ORTHO05D000476 9.5e-38 160.2 113 72.6
Thecc.05G276800 Theobroma cacao HOM05D006721 ORTHO05D000476 2.1e-37 159.1 114 74.6
FAN05G5208 Fragaria x ananassa HOM05D006721 ORTHO05D000476 6.1e-37 157.5 122 73.0
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 6.1e-37 157.5 122 73.0
Prupe.6G347400 Prunus persica HOM05D006721 ORTHO05D000476 6.1e-37 157.5 121 73.6
RcHm_v2.0_Chr3g0450141 Rosa chinensis HOM05D006721 ORTHO05D000476 6.1e-37 157.5 119 73.9
Lsat_1_v5_gn_2_107641 Lactuca sativa HOM05D006721 ORTHO05D000476 1.4e-36 156.4 111 74.8
Oeu058331.1 Olea europaea HOM05D006721 ORTHO05D000476 2.3e-36 155.6 105 78.1
Aa31LG8G12480 Aethionema arabicum HOM05D006721 ORTHO05D000476 3.0e-36 155.2 114 73.7
Nitab4.5_0000930g0080 Nicotiana tabacum HOM05D006721 ORTHO05D000476 3.0e-36 155.2 110 75.5
Carub.0003s2825 Capsella rubella HOM05D006721 ORTHO05D000476 4.0e-36 154.8 108 77.8
FvH4_6g02371 Fragaria vesca HOM05D006721 ORTHO05D000476 4.0e-36 154.8 119 73.1
Cpa.g.sc162.11 Carica papaya HOM05D006721 ORTHO05D000476 6.8e-36 154.1 105 77.1
CANSAT54G3036 Cannabis sativa HOM05D006721 ORTHO05D000476 8.9e-36 153.7 114 71.1
Actinidia38949 Actinidia chinensis HOM05D006721 ORTHO05D000476 1.2e-35 153.3 108 75.0
CSS0047325 Camellia sinensis var. sinensis HOM05D006721 ORTHO05D000476 1.2e-35 153.3 108 79.6
HanXRQChr11g0322821 Helianthus annuus HOM05D006721 ORTHO05D000476 1.2e-35 153.3 111 74.8
CARHR104660 Cardamine hirsuta HOM05D006721 ORTHO05D000476 1.5e-35 152.9 114 71.9
Nn1g02669 Nelumbo nucifera HOM05D006721 ORTHO05D000476 1.5e-35 152.9 108 76.9
Sp3g27300 Schrenkiella parvula HOM05D006721 ORTHO05D000476 2.0e-35 152.5 114 73.7
Gorai.008G193300 Gossypium raimondii HOM05D006721 ORTHO05D000476 3.4e-35 151.8 108 73.1
BraA03t13647Z Brassica rapa HOM05D006721 ORTHO05D000476 4.4e-35 151.4 114 73.7
Thhalv10023143m.g Eutrema salsugineum HOM05D006721 ORTHO05D000476 4.4e-35 151.4 114 72.8
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 4.4e-35 151.4 118 72.9
Ah.04g163750 Amaranthus hybridus HOM05D006721 ORTHO05D000476 7.5e-35 150.6 107 72.9
AT2G14045 Arabidopsis thaliana HOM05D006721 ORTHO05D000476 9.8e-35 150.2 110 74.5
FAN02G4370 Fragaria x ananassa HOM05D006721 ORTHO05D000476 1.3e-34 149.8 119 71.4
Gohir.D12G180151 Gossypium hirsutum HOM05D006721 ORTHO05D000476 1.3e-34 149.8 108 74.1
Sopen04g004980 Solanum pennellii HOM05D006721 ORTHO05D000476 1.3e-34 149.8 108 75.9
TAR365G0041 Trochodendron aralioides HOM05D006721 ORTHO05D000476 1.3e-34 149.8 108 75.9
Aqoxy2G03596 Aquilegia oxysepala HOM05D006721 ORTHO05D000476 1.7e-34 149.4 108 74.1
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.2e-34 149.1 122 69.7
BcaC01g03109 Brassica carinata HOM05D006721 ORTHO05D000476 3.7e-34 148.3 89 86.5
BolC3t17881H Brassica oleracea HOM05D006721 ORTHO05D000476 3.7e-34 148.3 89 86.5
SGA_v2.0_scaffold90G27702 Striga asiatica HOM05D006721 ORTHO05D000476 3.7e-34 148.3 99 76.8
Dinv18276 Davidia involucrata HOM05D006721 ORTHO05D000476 4.9e-34 147.9 101 78.2
Ca_09468_v3 Cicer arietinum L. HOM05D006721 ORTHO05D000476 6.3e-34 147.5 111 73.9
Peaxi162Scf00135g00914 Petunia axillaris HOM05D006721 ORTHO05D000476 6.3e-34 147.5 105 77.1
ECA238G3797 Erigeron canadensis HOM05D006721 ORTHO05D000476 1.1e-33 146.7 108 72.2
MD12G1244800 Malus domestica HOM05D006721 ORTHO05D000476 1.4e-33 146.4 118 71.2
Cc02_g09090 Coffea canephora HOM05D006721 ORTHO05D000476 1.8e-33 146.0 109 71.6
MBI19_g37090_MAGBIO Magnolia biondii HOM05D006721 ORTHO05D000476 1.8e-33 146.0 108 72.2
PGSC0003DMG400025428 Solanum tuberosum HOM05D006721 ORTHO05D000476 1.8e-33 146.0 108 73.1
Actinidia34741 Actinidia chinensis HOM05D006721 ORTHO05D000476 2.4e-33 145.6 108 72.2
EL10Ac4g09049 Beta vulgaris HOM05D006721 ORTHO05D000476 3.1e-33 145.2 107 69.2
vmacro10349 Vaccinium macrocarpon HOM05D006721 ORTHO05D000476 4.1e-33 144.8 108 72.2
A03p45120 Brassica napus HOM05D006721 ORTHO05D000476 9.2e-33 143.7 109 73.4
AUR62001066 Chenopodium quinoa HOM05D006721 ORTHO05D000476 9.2e-33 143.7 107 68.2
HPP92_000759 Vanilla planifolia HOM05D006721 ORTHO05D000476 1.2e-32 143.3 89 84.3
Nitab4.5_0002651g0060 Nicotiana tabacum HOM05D006721 ORTHO05D000476 2.0e-32 142.5 114 70.2
CAN.G186.72 Capsicum annuum HOM05D006721 ORTHO05D000476 2.7e-32 142.1 99 77.8
Migut.F00814 Erythranthe guttata HOM05D006721 ORTHO05D000476 2.7e-32 142.1 105 72.4
Hund06940 Selenicereus undatus HOM05D006721 ORTHO05D000476 2.7e-32 142.1 102 69.6
AL3G45710 Arabidopsis lyrata HOM05D006721 ORTHO05D000476 7.8e-32 140.6 121 66.9
C03p55970 Brassica napus HOM05D006721 ORTHO05D000476 7.8e-32 140.6 84 86.9
AUR62004887 Chenopodium quinoa HOM05D006721 ORTHO05D000476 7.8e-32 140.6 107 67.3
PSO210G7245 Papaver somniferum HOM05D006721 ORTHO05D000476 2.3e-31 139.0 111 70.3
MSTRG.9005 Avicennia marina HOM05D006721 ORTHO05D000476 2.9e-31 138.7 110 70.0
PSO832G0589 Papaver somniferum HOM05D006721 ORTHO05D000476 5.0e-31 137.9 111 70.3
CDE06G1546 Ceratophyllum demersum HOM05D006721 ORTHO05D000476 1.1e-30 136.7 110 67.3
ATR0665G282 Amborella trichopoda HOM05D006721 ORTHO05D000476 1.5e-30 136.3 99 70.7
Os07g0185800 Oryza sativa ssp. japonica HOM05D006721 ORTHO05D000476 4.3e-30 134.8 89 75.3
Sc15g0002500 Simmondsia chinensis HOM05D006721 ORTHO05D000476 7.3e-30 134.0 82 81.7
Zm00001eb301780 Zea mays HOM05D006721 ORTHO05D000476 1.2e-29 133.3 88 75.0
GSVIVG01014622001 Vitis vinifera HOM05D006721 ORTHO05D000476 5.2e-28 127.9 81 77.8
GSVIVG01015127001 Vitis vinifera HOM05D006721 ORTHO05D000476 1.5e-27 126.3 82 78.0
Duzib128G0372 Durio zibethinus HOM05D006721 ORTHO05D000476 1.4e-25 119.8 114 63.2
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 5.0e-23 111.3 105 61.9
arahy.Tifrunner.gnm1.ann1.DA1MAK Arachis hypogaea HOM05D006721 ORTHO05D000476 1.2e-21 106.7 87 65.5
arahy.Tifrunner.gnm1.ann1.P0L55B Arachis hypogaea HOM05D006721 ORTHO05D000476 1.2e-21 106.7 87 65.5
SMO367G0192 Selaginella moellendorffii HOM05D001348 ORTHO05D002788 2.1e-21 105.9 83 65.1
Mapoly0013s0055 Marchantia polymorpha HOM05D006721 ORTHO05D000476 2.8e-21 105.5 83 61.4
MELO3C004419.2 Cucumis melo HOM05D006721 ORTHO05D000476 3.6e-21 105.1 125 48.8
BraA09t38027Z Brassica rapa HOM05D006721 ORTHO05D000476 3.1e-20 102.1 82 68.3
BraA10t43135Z Brassica rapa HOM05D006721 ORTHO05D000476 3.1e-20 102.1 82 68.3
BraA06t26268Z Brassica rapa HOM05D006721 ORTHO05D000476 5.2e-20 101.3 83 69.9
Pp3c7_11510 Physcomitrium patens HOM05D006721 ORTHO05D000476 6.8e-20 100.9 82 56.1
A07p07050 Brassica napus HOM05D006721 ORTHO05D000476 1.2e-19 100.1 81 67.9
ClCG02G016980 Citrullus lanatus HOM05D006721 ORTHO05D000476 6.4e-18 94.4 115 47.8
A09p24350 Brassica napus HOM05D006721 ORTHO05D000476 1.3e-15 86.7 58 75.9
MCO10G233 Micromonas commoda HOM05D006721 ORTHO05D000476 3.9e-15 85.1 80 53.8
A01p30750 Brassica napus HOM05D001035 ORTHO05D000476 6.6e-15 84.3 58 74.1
C07p11900 Brassica napus HOM05D006721 ORTHO05D000476 8.6e-15 84.0 76 67.1
CBR_g51472 Chara braunii HOM05D006721 ORTHO05D000476 1.9e-14 82.8 89 46.1
BcaB06g29605 Brassica carinata HOM05D001035 ORTHO05D021752 7.3e-14 80.9 58 69.0
FAN09G4219 Fragaria x ananassa HOM05D006721 ORTHO05D000476 3.6e-13 78.6 81 54.3
BolC7t41661H Brassica oleracea HOM05D006721 ORTHO05D000476 4.7e-13 78.2 78 62.8
Rhsim09G0138600 Rhododendron simsii HOM05D006721 ORTHO05D000476 4.7e-13 78.2 70 61.4
Cre02.g105950 Chlamydomonas reinhardtii HOM05D006721 ORTHO05D000476 1.4e-12 76.6 85 49.4
Zm00001eb112450 Zea mays HOM05D006721 ORTHO05D000476 3.1e-12 75.5 51 66.7
PRCOL_00003504 Prasinoderma coloniale HOM05D006721 ORTHO05D000476 6.8e-12 74.3 73 50.7
A05p09770 Brassica napus HOM05D006721 ORTHO05D000476 5.8e-11 71.2 45 80.0
DCAR_030976 Daucus carota HOM05D006721 ORTHO05D000476 5.4e-09 64.7 58 60.3
SHI31376 Sapria himalayana HOM05D006721 ORTHO05D000476 3.0e-07 58.9 46 60.9
BolC5t30890H Brassica oleracea HOM05D000263 ORTHO05D028311 8.6e-07 57.4 41 68.3
C08p15110 Brassica napus HOM05D000263 ORTHO05D028311 1.1e-06 57.0 41 68.3
BolC8t49141H Brassica oleracea HOM05D000263 ORTHO05D028311 1.1e-06 57.0 41 68.3
A09p05680 Brassica napus HOM05D006721 ORTHO05D000476 9.5e-06 53.9 27 96.3


User provided reference genes

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