Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 1.5e-304 1048.9 585 100.0
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.8e-174 616.7 520 74.2
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 2.8e-154 549.7 540 62.8
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.5e-139 500.7 523 62.3
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 2.5e-131 473.4 477 59.7
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 3.3e-131 473.0 535 54.0
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 6.2e-130 468.8 522 55.0
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 3.4e-128 463.0 523 54.5
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 4.5e-128 462.6 535 58.3
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 7.6e-128 461.8 473 57.9
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 2.2e-127 460.3 527 56.7
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 6.4e-127 458.8 523 54.5
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 2.4e-126 456.8 520 54.8
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 1.2e-125 454.5 529 54.6
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 2.7e-125 453.4 523 56.2
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 3.5e-125 453.0 519 59.0
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 5.1e-124 449.1 520 51.9
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 6.7e-124 448.7 520 58.3
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 1.5e-123 447.6 521 57.8
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.5e-123 446.8 539 52.9
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.5e-123 446.8 539 52.9
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.3e-123 446.0 539 51.8
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 4.3e-123 446.0 529 52.9
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 2.8e-122 443.4 521 56.6
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 3.7e-122 443.0 530 52.6
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 6.2e-122 442.2 521 52.2
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 3.1e-121 439.9 522 56.3
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 3.1e-121 439.9 524 51.5
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.0e-121 439.5 539 50.6
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 1.2e-120 438.0 470 56.2
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 2.0e-120 437.2 520 54.8
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 2.0e-120 437.2 522 51.9
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 5.8e-120 435.6 530 57.5
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 7.6e-120 435.3 527 51.8
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 6.4e-119 432.2 539 51.0
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 2.5e-118 430.3 522 51.5
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 3.2e-118 429.9 521 52.0
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 7.1e-118 428.7 522 50.6
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.6e-117 427.6 522 50.6
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 2.1e-117 427.2 532 50.4
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 4.6e-117 426.0 521 51.2
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 6.0e-117 425.6 523 51.2
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 6.0e-117 425.6 538 51.9
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 5.1e-116 422.5 476 54.0
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.9e-115 420.6 525 53.1
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 5.6e-115 419.1 470 54.5
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 7.4e-115 418.7 470 55.1
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 2.1e-114 417.2 542 50.0
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 3.7e-114 416.4 546 49.5
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 2.4e-113 413.7 524 49.6
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 3.1e-113 413.3 527 51.0
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 5.3e-113 412.5 538 48.3
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 6.9e-113 412.1 548 48.5
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 9.0e-113 411.8 477 53.2
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.0e-112 410.6 531 49.9
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 5.8e-112 409.1 542 51.8
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.1e-110 404.8 525 50.1
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.9e-110 404.1 532 48.9
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 2.5e-110 403.7 546 51.1
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 3.2e-110 403.3 525 49.3
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 3.2e-110 403.3 531 51.4
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 5.5e-110 402.5 545 47.9
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 2.7e-109 400.2 539 51.9
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.7e-109 400.2 539 51.9
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.5e-109 399.8 539 51.8
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 3.5e-109 399.8 554 47.3
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 6.0e-109 399.1 520 50.0
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 7.9e-109 398.7 547 47.3
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 7.9e-109 398.7 525 49.1
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 7.9e-109 398.7 524 50.4
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.3e-108 397.9 480 51.9
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.8e-108 397.5 551 47.4
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 3.0e-108 396.7 469 53.1
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 1.9e-107 394.0 550 48.5
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 1.3e-106 391.3 553 50.3
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 1.6e-106 391.0 552 46.9
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 2.8e-106 390.2 544 47.4
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 8.2e-106 388.7 522 51.7
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 1.1e-105 388.3 522 49.6
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 4.1e-105 386.3 454 52.9
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 9.0e-105 385.2 519 48.4
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 1.5e-104 384.4 523 49.5
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 2.6e-104 383.6 473 49.9
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 3.4e-104 383.3 558 47.7
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 1.7e-103 380.9 448 52.5
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 2.9e-103 380.2 521 47.2
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 1.4e-102 377.9 459 51.9
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 7.2e-102 375.6 531 47.8
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 3.6e-101 373.2 469 50.3
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 4.3e-99 366.3 523 46.7
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 9.7e-99 365.2 545 45.0
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 3.7e-98 363.2 545 44.8
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 9.1e-97 358.6 448 49.6
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.0e-95 355.1 527 46.3
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 3.8e-95 353.2 545 44.4
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 4.7e-93 346.3 423 51.5
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 9.1e-89 332.0 476 47.5
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 3.5e-88 330.1 489 43.8
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 3.6e-85 320.1 443 48.8
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 8.8e-84 315.5 439 46.7
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 1.0e-76 292.0 448 40.6
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 4.0e-76 290.0 383 47.5
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 2.6e-75 287.3 427 44.0
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 4.0e-68 263.5 434 46.1
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.8e-61 240.7 382 40.8
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 6.1e-61 239.6 220 59.1
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 8.9e-60 235.7 451 36.6
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 3.9e-55 220.3 264 61.0
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 4.3e-54 216.9 485 33.2
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 1.0e-52 212.2 447 35.3
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 3.1e-52 210.7 420 37.6
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 4.6e-48 196.8 131 77.1
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 4.3e-46 190.3 204 55.4
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 1.7e-42 178.3 493 29.6
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.1e-32 144.8 88 76.1
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 4.8e-21 107.1 86 66.3
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 4.0e-20 104.0 76 76.3
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 1.1e-12 79.3 176 35.2
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 1.4e-12 79.0 505 23.4
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 2.2e-10 71.6 144 34.7
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 1.1e-09 69.3 46 69.6
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 2.4e-09 68.2 44 72.7
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 5.4e-09 67.0 44 70.5
C03p06830 Brassica napus HOM05D006391 ORTHO05D007767 7.1e-09 66.6 187 31.6
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 6.0e-08 63.5 125 40.8


User provided reference genes

Program Settings