Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04432 Corylus avellana HOM05D000329 ORTHO05D005330 6.9e-240 833.6 419 100.0
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.1e-152 543.9 309 92.6
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 5.4e-136 488.4 314 80.9
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 1.9e-125 453.4 314 72.6
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 3.1e-123 446.0 314 72.3
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 5.3e-123 445.3 314 72.6
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 1.9e-120 436.8 314 69.4
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 1.6e-119 433.7 314 69.7
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 2.7e-119 433.0 314 68.5
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 2.3e-118 429.9 315 71.7
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 3.9e-118 429.1 314 70.4
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 3.9e-118 429.1 314 70.4
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 1.5e-117 427.2 315 70.8
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 2.5e-117 426.4 314 69.1
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 4.3e-117 425.6 314 68.2
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 7.4e-117 424.9 315 71.1
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 1.6e-116 423.7 314 68.2
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 4.8e-116 422.2 314 69.1
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.8e-116 422.2 314 69.1
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.8e-116 422.2 314 69.1
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 8.2e-116 421.4 314 67.5
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.8e-115 420.2 314 68.8
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 2.4e-115 419.9 380 60.8
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 3.1e-115 419.5 314 67.2
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 5.3e-115 418.7 314 68.5
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 6.9e-115 418.3 315 68.9
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 3.4e-114 416.0 317 66.9
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 7.6e-114 414.8 314 68.2
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 1.0e-113 414.5 314 68.2
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.3e-113 414.1 314 66.2
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 1.3e-113 414.1 315 68.3
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 1.7e-113 413.7 317 66.9
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 2.2e-113 413.3 315 68.3
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.9e-113 412.1 329 66.0
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 4.9e-113 412.1 315 68.9
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 6.5e-113 411.8 315 67.9
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 8.4e-113 411.4 315 68.9
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 1.4e-112 410.6 314 67.2
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 4.2e-112 409.1 312 67.3
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 7.1e-112 408.3 314 67.8
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 7.1e-112 408.3 314 67.8
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 7.1e-112 408.3 314 67.8
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 7.1e-112 408.3 314 66.9
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 9.3e-112 407.9 315 67.0
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 1.6e-111 407.1 314 67.2
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.6e-111 407.1 314 67.2
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 3.5e-111 406.0 314 66.2
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 3.5e-111 406.0 314 66.9
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 3.5e-111 406.0 314 66.9
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 6.0e-111 405.2 314 66.2
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 7.9e-111 404.8 314 66.2
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 7.9e-111 404.8 316 65.5
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 1.0e-110 404.4 310 67.7
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 1.3e-110 404.1 314 66.2
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 1.1e-109 401.0 314 66.2
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 1.5e-109 400.6 314 64.6
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 1.5e-109 400.6 316 63.6
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 2.5e-109 399.8 314 63.7
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 3.3e-109 399.4 314 65.6
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 4.3e-109 399.1 314 65.6
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 2.8e-108 396.4 314 64.0
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 3.7e-108 396.0 314 65.3
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 6.3e-108 395.2 314 65.0
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 1.4e-107 394.0 403 54.8
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 1.2e-106 391.0 318 63.2
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 1.2e-106 391.0 395 54.7
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 2.6e-106 389.8 314 65.6
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 4.5e-106 389.0 314 65.6
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 1.7e-105 387.1 316 63.0
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 2.9e-105 386.3 314 63.1
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 9.3e-104 381.3 314 62.1
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 1.6e-103 380.6 314 60.5
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 2.7e-103 379.8 316 59.8
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 2.7e-103 379.8 314 62.4
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 2.7e-103 379.8 313 64.9
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 3.6e-103 379.4 314 64.3
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 1.8e-102 377.1 314 59.6
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 1.3e-100 370.9 317 62.1
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 1.7e-100 370.5 314 62.1
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.1e-99 367.9 318 61.0
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 1.1e-99 367.9 314 58.3
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 6.9e-99 365.2 314 61.5
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.2e-98 364.4 318 60.4
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 6.1e-95 352.1 314 58.3
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 1.0e-94 351.3 375 52.5
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 2.6e-93 346.7 314 58.3
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 1.1e-88 331.3 314 54.5
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 9.7e-77 291.6 313 50.5
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 7.0e-75 285.4 315 49.5
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 7.0e-75 285.4 320 47.2
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 1.3e-73 281.2 314 51.9
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 2.0e-69 267.3 321 46.4
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 8.3e-68 261.9 316 45.9
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.8e-67 260.8 322 44.1
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 1.2e-63 248.1 178 72.5
QL03p030502 Quercus lobata HOM05D000329 ORTHO05D005330 3.4e-61 240.0 149 82.6
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 4.5e-58 229.6 318 44.7
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 2.3e-57 227.3 332 41.0
Hma1.2p1_1512F.1_g287930 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 3.4e-53 213.4 238 50.4
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 3.5e-50 203.4 227 47.6
Nitab4.5_0000432g0100 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.2e-47 194.9 167 59.3
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 4.4e-45 186.4 314 37.3
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 9.8e-45 185.3 313 40.3
Hma1.2p1_1512F.1_g287950 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 5.4e-43 179.5 124 71.8
Nitab4.5_0003285g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.0e-41 175.3 197 49.7
ClCG06G009520 Citrullus lanatus HOM05D000329 ORTHO05D005330 8.6e-41 172.2 124 70.2
SalBow6G5354 Salvia bowleyana HOM05D000329 ORTHO05D005330 4.7e-39 166.4 124 68.5
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 7.5e-37 159.1 298 36.2
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 7.5e-37 159.1 298 36.2
ClCG06G009480 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.5e-32 144.8 193 44.6
Nitab4.5_0000432g0110 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.4e-30 138.3 105 67.6
DCAR_000980 Daucus carota HOM05D000329 ORTHO05D005330 1.7e-25 121.3 85 68.2
CAN.G155.4 Capsicum annuum HOM05D000329 ORTHO05D005330 6.2e-23 112.8 78 69.2
Nitab4.5_0025717g0010 Nicotiana tabacum HOM05D000329 ORTHO05D005330 6.2e-23 112.8 161 43.5
Nitab4.5_0003285g0070 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.1e-22 112.1 89 65.2
Rhsim10G0071600 Rhododendron simsii HOM05D000329 ORTHO05D005330 9.0e-22 109.0 78 66.7
Rhsim05G0128300 Rhododendron simsii HOM05D000329 ORTHO05D005330 2.9e-20 104.0 207 37.7
Cre09.g404350 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D005330 1.1e-19 102.1 321 29.6
MBI10_g44932_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D005330 1.6e-18 98.2 86 58.1
SHI23206 Sapria himalayana HOM05D000329 ORTHO05D005330 2.6e-13 80.9 79 51.9
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 2.3e-09 67.8 56 53.6
Solyc12g027560.1 Solanum lycopersicum HOM05D000329 ORTHO05D005330 2.1e-07 61.2 41 65.9
Lsat_1_v5_gn_8_51680 Lactuca sativa HOM05D000144 ORTHO05D005330 6.2e-07 59.7 35 71.4
Lsat_1_v5_gn_7_55340 Lactuca sativa HOM05D000144 ORTHO05D005330 1.1e-06 58.9 35 71.4


User provided reference genes

Program Settings