Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04431 Corylus avellana HOM05D000329 ORTHO05D005330 1.0e-111 406.8 211 100.0
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 7.5e-102 374.0 200 97.0
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 2.8e-88 328.9 200 82.5
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 1.4e-87 326.6 200 85.0
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 1.6e-80 303.1 200 75.5
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 3.6e-80 302.0 200 78.5
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 8.1e-80 300.8 200 77.5
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 1.4e-79 300.1 200 77.5
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 3.1e-79 298.9 200 77.0
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 4.0e-79 298.5 200 78.0
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 5.2e-79 298.1 200 77.0
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 2.0e-78 296.2 200 76.5
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 7.6e-78 294.3 200 76.0
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 7.6e-78 294.3 200 76.0
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 7.6e-78 294.3 200 77.0
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 1.7e-77 293.1 200 76.0
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 2.9e-77 292.4 200 76.5
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 2.4e-76 289.3 200 75.0
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 2.4e-76 289.3 200 73.0
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 4.2e-76 288.5 200 74.5
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 4.2e-76 288.5 200 74.5
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.6e-75 286.6 200 73.5
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 2.1e-75 286.2 200 73.5
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 2.7e-75 285.8 200 73.0
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 2.7e-75 285.8 200 72.0
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 3.5e-75 285.4 200 71.0
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 3.5e-75 285.4 200 73.0
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 1.0e-74 283.9 202 72.8
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 1.0e-74 283.9 196 76.0
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 1.3e-74 283.5 200 71.0
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 2.3e-74 282.7 200 71.0
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 3.9e-74 282.0 200 74.0
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.1e-73 280.4 200 71.5
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 1.9e-73 279.6 200 72.0
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 2.5e-73 279.3 200 72.0
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 4.3e-73 278.5 200 69.5
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 3.6e-72 275.4 200 71.5
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 3.6e-72 275.4 198 71.7
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 4.8e-72 275.0 200 69.0
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 1.4e-71 273.5 200 69.0
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 4.0e-71 271.9 202 70.8
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 9.0e-71 270.8 200 70.0
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 9.0e-71 270.8 232 62.1
Nitab4.5_0000432g0100 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.2e-70 270.4 198 69.7
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 1.2e-70 270.4 203 71.4
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.5e-70 270.0 231 63.6
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.5e-70 270.0 231 63.6
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 1.5e-70 270.0 200 70.0
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 3.4e-70 268.9 198 69.2
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.4e-70 268.5 231 63.2
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 4.4e-70 268.5 198 69.2
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 9.9e-70 267.3 200 68.5
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 2.9e-69 265.8 200 70.0
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 3.8e-69 265.4 200 70.5
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 3.8e-69 265.4 200 70.0
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 3.8e-69 265.4 200 69.0
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 4.9e-69 265.0 200 71.0
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 6.4e-69 264.6 200 67.5
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 6.4e-69 264.6 198 69.2
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 8.4e-69 264.2 200 70.5
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 8.4e-69 264.2 200 70.0
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 1.1e-68 263.8 200 70.5
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 1.4e-68 263.5 200 69.5
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 3.2e-68 262.3 200 69.5
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 3.2e-68 262.3 200 69.0
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 9.3e-68 260.8 200 69.5
ClCG06G009480 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.2e-67 260.4 202 70.8
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 1.6e-67 260.0 200 69.0
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.6e-67 260.0 200 69.0
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 2.7e-67 259.2 200 68.0
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 4.6e-67 258.5 199 66.3
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 7.9e-67 257.7 199 65.3
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 1.0e-66 257.3 200 67.0
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 3.9e-66 255.4 199 64.8
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 5.1e-66 255.0 196 68.9
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 1.9e-65 253.1 199 64.3
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 4.3e-65 251.9 199 65.3
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 9.6e-65 250.8 218 62.8
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 1.6e-64 250.0 196 67.3
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 1.6e-64 250.0 200 66.0
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 1.6e-64 250.0 200 65.0
Hma1.2p1_3491F.1_g336380 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 1.8e-63 246.5 199 66.3
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 2.4e-63 246.1 222 60.8
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 3.1e-63 245.7 196 66.3
Nitab4.5_0003285g0070 Nicotiana tabacum HOM05D000329 ORTHO05D005330 3.4e-62 242.3 198 65.7
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 7.9e-59 231.1 200 63.5
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.7e-58 228.0 205 61.5
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 4.3e-57 225.3 165 70.9
Rhsim10G0071500 Rhododendron simsii HOM05D000329 ORTHO05D005330 2.4e-55 219.5 175 66.3
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 1.2e-54 217.2 197 60.9
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.0e-50 204.1 188 62.2
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 1.3e-50 203.8 200 56.0
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 2.3e-50 203.0 155 67.1
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 3.7e-48 195.7 195 54.4
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 1.5e-46 190.3 195 52.3
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 3.2e-44 182.6 196 50.5
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 9.3e-44 181.0 196 51.5
Cpa.g.sc162.43 Carica papaya HOM05D000329 ORTHO05D005330 2.1e-43 179.9 121 74.4
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 1.3e-42 177.2 196 52.0
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 3.0e-42 176.0 196 50.5
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.2e-38 164.1 197 46.7
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 2.0e-38 163.3 197 47.2
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 5.1e-34 148.7 199 45.2
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 5.1e-34 148.7 199 45.2
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 7.2e-28 128.3 90 70.0
Rhsim05G0128300 Rhododendron simsii HOM05D000329 ORTHO05D005330 1.6e-27 127.1 155 52.9
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 2.2e-24 116.7 161 46.0
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 7.0e-23 111.7 197 36.5
SHI23201 Sapria himalayana HOM05D000329 ORTHO05D005330 5.2e-18 95.5 85 57.6
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 3.3e-17 92.8 203 32.0
Oeu044815.2 Olea europaea HOM05D002525 ORTHO05D002727 1.5e-09 67.4 42 69.0
SHI23202 Sapria himalayana HOM05D000329 ORTHO05D005330 1.3e-08 64.3 80 45.0


User provided reference genes

Program Settings