Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04430 Corylus avellana HOM05D000329 ORTHO05D005330 2.6e-115 418.7 206 100.0
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 4.3e-94 348.2 178 94.4
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 9.6e-86 320.5 184 85.3
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 1.8e-84 316.2 178 86.0
Cpa.g.sc162.43 Carica papaya HOM05D000329 ORTHO05D005330 5.1e-79 298.1 184 77.2
QL93p0164_0019 Quercus lobata HOM05D000329 ORTHO05D005330 2.5e-78 295.8 161 88.8
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 1.6e-77 293.1 178 79.2
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 1.6e-77 293.1 178 79.2
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 2.1e-77 292.7 200 71.0
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 6.3e-77 291.2 182 77.5
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 3.1e-76 288.9 184 75.5
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 6.9e-76 287.7 178 77.0
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 2.0e-75 286.2 176 79.0
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 4.5e-75 285.0 188 72.9
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 5.9e-75 284.6 184 75.5
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 7.6e-75 284.3 178 75.8
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 1.3e-74 283.5 188 73.4
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 2.2e-74 282.7 184 72.8
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 5.0e-74 281.6 184 74.5
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 8.5e-74 280.8 178 74.7
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 8.5e-74 280.8 178 74.7
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 1.4e-73 280.0 184 75.0
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 1.9e-73 279.6 184 73.9
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 2.5e-73 279.3 186 72.0
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 5.5e-73 278.1 184 72.3
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 7.2e-73 277.7 184 75.0
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 1.6e-72 276.6 184 73.4
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 2.1e-72 276.2 184 71.2
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 4.6e-72 275.0 186 72.0
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 1.0e-71 273.9 178 75.8
Hma1.2p1_3491F.1_g336370 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 1.3e-71 273.5 186 70.4
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 1.3e-71 273.5 184 71.7
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 1.8e-71 273.1 184 71.7
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 1.8e-71 273.1 184 73.9
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 1.8e-71 273.1 179 73.2
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 6.7e-71 271.2 183 71.6
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.5e-70 270.0 178 73.6
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 1.9e-70 269.6 178 73.0
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 4.3e-70 268.5 183 70.5
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.3e-70 268.5 183 70.5
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.3e-70 268.5 183 70.5
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 5.7e-70 268.1 183 69.9
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 7.4e-70 267.7 183 71.6
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 9.7e-70 267.3 183 70.5
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.6e-69 266.5 187 68.4
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.6e-69 266.5 187 68.4
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 2.8e-69 265.8 202 64.4
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 3.7e-69 265.4 178 71.3
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 4.8e-69 265.0 184 69.6
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 6.3e-69 264.6 181 69.6
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 1.8e-68 263.1 183 69.4
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 2.4e-68 262.7 185 67.6
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 2.4e-68 262.7 178 68.5
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 2.4e-68 262.7 185 67.6
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 5.3e-68 261.5 181 71.3
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 5.3e-68 261.5 176 71.6
QL04p089247 Quercus lobata HOM05D000176 ORTHO05D000106 1.5e-67 260.0 180 75.6
QL05p031734 Quercus lobata HOM05D000176 ORTHO05D000106 1.5e-67 260.0 180 75.6
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 3.4e-67 258.8 178 68.0
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 3.4e-67 258.8 178 68.0
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 3.4e-67 258.8 178 68.0
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 5.9e-67 258.1 177 68.4
ClCG06G009470 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.3e-66 256.9 177 70.6
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 2.9e-66 255.8 186 65.1
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 2.9e-66 255.8 178 70.2
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 2.9e-66 255.8 178 70.2
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 2.9e-66 255.8 178 66.9
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 3.8e-66 255.4 178 66.9
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 5.0e-66 255.0 180 66.1
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 1.9e-65 253.1 187 64.7
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 4.2e-65 251.9 168 71.4
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 9.4e-65 250.8 178 66.3
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 1.2e-64 250.4 178 65.2
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 1.6e-64 250.0 179 64.2
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 1.6e-64 250.0 187 64.2
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 2.1e-64 249.6 180 66.1
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 2.1e-64 249.6 173 70.5
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 3.6e-64 248.8 178 65.2
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 1.0e-63 247.3 182 67.6
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 3.0e-63 245.7 178 64.6
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 3.0e-63 245.7 179 64.2
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 4.4e-62 241.9 202 58.4
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 1.7e-61 240.0 187 62.0
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 2.2e-61 239.6 187 61.5
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 5.3e-60 235.0 189 60.3
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 3.4e-59 232.3 178 62.4
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 1.6e-56 223.4 183 59.6
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 3.9e-55 218.8 178 60.7
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 6.7e-55 218.0 181 58.6
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 1.3e-50 203.8 182 56.0
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 1.2e-48 197.2 191 49.7
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 8.0e-48 194.5 193 50.8
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.4e-39 167.2 181 48.6
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.8e-39 166.8 189 45.5
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 2.8e-37 159.5 182 45.6
Nitab4.5_0003285g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 7.7e-35 151.4 114 64.0
Nitab4.5_0000432g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.0e-34 151.0 114 64.0
Sed0005472 Sechium edule HOM05D000329 ORTHO05D005330 2.0e-30 136.7 116 59.5
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.1e-28 131.0 176 40.3
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 1.0e-26 124.4 183 42.1
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 5.0e-26 122.1 94 56.4
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 8.9e-23 111.3 190 36.8
Nitab4.5_0000432g0100 Nicotiana tabacum HOM05D000329 ORTHO05D005330 3.4e-22 109.4 61 80.3
SHI23198 Sapria himalayana HOM05D005377 ORTHO05D003034 3.2e-20 102.8 63 68.3
SHI23197 Sapria himalayana HOM05D000329 ORTHO05D005330 7.8e-19 98.2 116 44.0
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 3.0e-18 96.3 174 34.5
Rhsim10G0071500 Rhododendron simsii HOM05D000329 ORTHO05D005330 1.1e-15 87.8 75 54.7
Cfa012903 Carpinus fangiana HOM05D000329 ORTHO05D005330 5.2e-15 85.5 48 87.5
Nitab4.5_0003285g0070 Nicotiana tabacum HOM05D000329 ORTHO05D005330 4.9e-13 79.0 44 81.8
Lsat_1_v5_gn_7_52100 Lactuca sativa HOM05D000329 ORTHO05D005330 3.0e-10 69.7 70 47.1


User provided reference genes

Program Settings