Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04429 Corylus avellana HOM05D000329 ORTHO05D005330 7.2e-43 176.8 86 100.0
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 2.2e-31 138.7 70 95.7
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 7.0e-30 133.7 69 94.2
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 2.2e-28 128.6 69 88.4
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 2.9e-28 128.3 69 88.4
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 6.5e-28 127.1 69 88.4
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 8.5e-28 126.7 69 87.0
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 8.5e-28 126.7 69 88.4
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 8.5e-28 126.7 69 88.4
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 8.5e-28 126.7 69 87.0
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 8.5e-28 126.7 69 87.0
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 8.5e-28 126.7 69 87.0
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 8.5e-28 126.7 69 88.4
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 1.5e-27 125.9 69 85.5
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 1.5e-27 125.9 69 84.1
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 1.9e-27 125.6 69 87.0
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 2.5e-27 125.2 69 85.5
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 3.2e-27 124.8 69 85.5
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 3.2e-27 124.8 69 84.1
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.2e-27 124.8 69 84.1
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.2e-27 124.8 69 84.1
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.2e-27 124.8 69 84.1
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 3.2e-27 124.8 69 84.1
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 3.2e-27 124.8 69 87.0
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 4.2e-27 124.4 69 84.1
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 4.2e-27 124.4 69 84.1
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 5.5e-27 124.0 69 82.6
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 5.5e-27 124.0 69 85.5
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 5.5e-27 124.0 70 84.3
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 9.4e-27 123.2 69 82.6
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 9.4e-27 123.2 69 84.1
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 1.2e-26 122.9 69 87.0
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 1.2e-26 122.9 69 87.0
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 2.1e-26 122.1 69 85.5
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 2.1e-26 122.1 69 85.5
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 2.1e-26 122.1 69 85.5
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 2.1e-26 122.1 69 84.1
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.7e-26 121.7 69 82.6
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 2.7e-26 121.7 69 84.1
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 3.6e-26 121.3 69 81.2
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 4.7e-26 120.9 69 84.1
COL.COLO4_15480 Corchorus olitorius HOM05D000329 ORTHO05D005330 1.0e-25 119.8 67 88.1
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 1.4e-25 119.4 69 82.6
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 1.4e-25 119.4 69 82.6
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 1.4e-25 119.4 69 81.2
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 2.3e-25 118.6 74 77.0
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 3.0e-25 118.2 69 76.8
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 5.2e-25 117.5 69 78.3
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 6.7e-25 117.1 64 90.6
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 6.7e-25 117.1 69 78.3
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 6.7e-25 117.1 69 81.2
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 8.8e-25 116.7 69 81.2
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 1.2e-24 116.3 69 76.8
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 1.5e-24 115.9 69 76.8
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 1.5e-24 115.9 69 79.7
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 2.0e-24 115.5 69 79.7
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 2.0e-24 115.5 69 79.7
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 2.0e-24 115.5 69 81.2
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 3.3e-24 114.8 69 81.2
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 3.3e-24 114.8 69 81.2
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 3.3e-24 114.8 69 78.3
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 5.7e-24 114.0 69 78.3
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 7.5e-24 113.6 69 79.7
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 1.7e-23 112.5 69 78.3
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 1.7e-23 112.5 69 78.3
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 2.2e-23 112.1 69 78.3
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 1.4e-22 109.4 69 75.4
Nitab4.5_0003285g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.4e-22 109.4 80 67.5
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 4.1e-22 107.8 68 75.0
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 5.3e-22 107.5 69 73.9
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 7.0e-22 107.1 69 71.0
Nitab4.5_0000432g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 2.7e-21 105.1 74 70.3
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 3.5e-21 104.8 69 66.7
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 3.5e-21 104.8 68 72.1
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 5.9e-21 104.0 68 70.6
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 1.3e-20 102.8 69 69.6
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 1.3e-20 102.8 69 69.6
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 1.3e-20 102.8 69 69.6
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 1.3e-20 102.8 69 69.6
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.3e-20 102.8 69 69.6
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 6.5e-20 100.5 69 69.6
AT4G38092 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 2.5e-19 98.6 64 76.6
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 4.2e-19 97.8 69 65.2
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 7.2e-19 97.1 69 68.1
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 1.6e-18 95.9 69 63.8
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.3e-15 86.3 62 66.1
SEGI_11781 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 2.8e-15 85.1 74 55.4
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 7.0e-14 80.5 69 59.4
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 2.0e-13 79.0 69 53.6
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 5.9e-13 77.4 69 50.7
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 5.9e-13 77.4 69 50.7
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 7.7e-13 77.0 69 49.3
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 7.7e-13 77.0 69 49.3
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.7e-12 75.9 69 50.7
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 6.1e-10 67.4 63 47.6
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 1.5e-08 62.8 45 62.2
Cpa.g.sc162.42 Carica papaya HOM05D000329 ORTHO05D028196 2.0e-08 62.4 36 83.3
ClCG06G009450 Citrullus lanatus HOM05D000329 ORTHO05D005330 3.4e-08 61.6 35 85.7
ClCG06G009460 Citrullus lanatus HOM05D000329 ORTHO05D005330 9.8e-08 60.1 36 80.6
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 1.8e-06 55.8 34 76.5
Sed0009230 Sechium edule HOM05D000329 ORTHO05D028196 3.1e-06 55.1 29 89.7
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 7.0e-06 53.9 62 54.8


User provided reference genes

Program Settings