Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 1.6e-93 347.8 170 100.0
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 4.4e-75 286.6 170 84.1
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 4.3e-70 270.0 171 77.8
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 6.4e-58 229.6 169 68.0
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 1.2e-56 225.3 172 65.7
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.3e-55 221.1 172 63.4
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 3.6e-53 213.8 168 62.5
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 5.3e-52 209.9 169 63.3
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 5.3e-52 209.9 169 63.3
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 1.7e-50 204.9 171 63.2
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 2.2e-50 204.5 168 61.3
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 3.8e-50 203.8 168 64.3
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.2e-49 200.7 173 61.3
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.2e-49 200.7 173 61.3
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 9.3e-49 199.1 173 60.1
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.2e-48 198.7 173 60.1
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 2.7e-48 197.6 168 59.5
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 6.0e-48 196.4 170 59.4
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 5.1e-47 193.4 154 63.6
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 8.7e-47 192.6 168 57.1
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 8.7e-47 192.6 171 56.7
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 1.1e-46 192.2 176 59.1
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 6.9e-44 183.0 167 56.9
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 1.2e-43 182.2 167 56.9
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 4.5e-43 180.3 170 52.9
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.8e-43 179.9 172 54.1
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.8e-43 179.9 172 54.1
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 7.6e-43 179.5 170 54.1
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 1.0e-42 179.1 167 55.7
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 2.2e-42 177.9 172 53.5
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 6.5e-42 176.4 171 51.5
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 1.4e-41 175.3 182 53.3
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.9e-41 174.9 172 52.3
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 2.5e-41 174.5 175 56.0
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 2.5e-41 174.5 175 52.6
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 5.5e-41 173.3 171 56.7
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 1.2e-40 172.2 165 54.5
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 1.0e-39 169.1 156 57.1
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 1.3e-39 168.7 175 50.3
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 5.1e-39 166.8 171 48.5
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 5.1e-39 166.8 169 50.3
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 6.7e-39 166.4 124 62.1
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 6.7e-39 166.4 96 78.1
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 6.7e-39 166.4 171 49.1
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 1.9e-38 164.9 178 48.9
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 1.9e-38 164.9 180 50.0
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 2.5e-38 164.5 169 52.1
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 2.5e-38 164.5 172 53.5
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 3.3e-38 164.1 169 52.1
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 7.4e-38 162.9 174 51.7
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 1.6e-37 161.8 172 53.5
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 2.8e-37 161.0 169 50.9
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 2.8e-37 161.0 169 50.9
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 4.8e-37 160.2 174 54.0
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 7.6e-35 152.9 170 48.8
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 1.7e-34 151.8 216 42.1
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 5.0e-34 150.2 97 70.1
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 8.4e-34 149.4 167 50.3
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 1.4e-33 148.7 173 47.4
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.4e-33 148.7 173 50.9
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 2.5e-33 147.9 154 53.9
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 3.2e-33 147.5 137 56.2
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 5.5e-33 146.7 173 48.6
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 7.2e-33 146.4 132 56.8
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 2.1e-32 144.8 179 46.4
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 1.3e-31 142.1 125 55.2
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.8e-31 141.7 169 46.2
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 3.0e-31 141.0 157 48.4
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 1.8e-28 131.7 166 43.4
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 4.5e-27 127.1 96 66.7
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 1.0e-26 125.9 167 43.7
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 1.3e-26 125.6 181 42.0
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 8.5e-26 122.9 182 39.6
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 1.1e-25 122.5 75 74.7
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 1.4e-25 122.1 154 48.1
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 2.7e-24 117.9 137 48.9
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 2.3e-23 114.8 189 38.6
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 3.0e-23 114.4 138 46.4
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 3.0e-23 114.4 147 42.2
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 3.9e-23 114.0 138 45.7
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 5.1e-23 113.6 75 66.7
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 6.7e-23 113.2 219 36.1
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 8.8e-23 112.8 185 38.4
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 7.4e-22 109.8 136 44.1
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 7.4e-22 109.8 135 43.7
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 7.4e-22 109.8 152 44.1
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 9.7e-22 109.4 176 38.6
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 3.7e-21 107.5 142 45.1
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 1.8e-20 105.1 142 40.1
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 9.1e-20 102.8 130 45.4
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 8.5e-18 96.3 69 68.1
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 1.1e-14 85.9 75 57.3
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 4.1e-12 77.4 127 39.4
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 4.1e-12 77.4 127 39.4
Nitab4.5_0006737g0010 Nicotiana tabacum HOM05D007620 ORTHO05D009568 7.0e-12 76.6 43 79.1
Thhalv10022408m.g Eutrema salsugineum HOM05D007620 ORTHO05D009568 9.1e-12 76.3 43 76.7
Sopen04g005200 Solanum pennellii HOM05D007620 ORTHO05D009568 1.2e-11 75.9 43 76.7
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 2.6e-11 74.7 135 37.0
Nitab4.5_0003780g0130 Nicotiana tabacum HOM05D007620 ORTHO05D009568 4.5e-11 73.9 43 76.7
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.5e-09 68.2 99 41.4
COL.COLO4_15482 Corchorus olitorius HOM05D007620 ORTHO05D009568 5.5e-09 67.0 49 65.3
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.6e-08 65.5 130 33.8
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 6.7e-07 60.1 95 36.8
MSTRG.21866 Avicennia marina HOM05D000424 ORTHO05D000355 1.1e-06 59.3 98 27.6
SGA_v2.0_scaffold105G30402 Striga asiatica HOM05D000424 ORTHO05D000355 1.1e-06 59.3 95 29.5
CDE12G0214 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 3.3e-06 57.8 89 31.5
PSO384G3142 Papaver somniferum HOM05D025533 ORTHO05D021545 3.3e-06 57.8 85 34.1
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 4.4e-06 57.4 93 31.2
TAR629G0629 Trochodendron aralioides HOM05D007956 ORTHO05D010152 5.7e-06 57.0 95 32.6
FAN21G0605 Fragaria x ananassa HOM05D007212 ORTHO05D009094 7.5e-06 56.6 98 31.6
VMungo1215G2034 Vigna mungo HOM05D003210 ORTHO05D000001 7.5e-06 56.6 97 33.0
MD15G1097900 Malus domestica HOM05D003689 ORTHO05D003950 9.7e-06 56.2 91 29.7


User provided reference genes

Program Settings