Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04423 Corylus avellana HOM05D004964 ORTHO05D005918 1.9e-98 362.5 175 100.0
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 1.1e-74 283.5 170 83.5
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 1.1e-50 203.8 168 61.9
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 3.6e-49 198.7 165 63.6
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 2.0e-47 193.0 165 63.6
QL03p030283 Quercus lobata HOM05D004964 ORTHO05D005918 2.2e-46 189.5 164 62.2
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 2.2e-46 189.5 164 63.4
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 3.5e-36 155.6 166 52.4
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 8.6e-35 151.0 172 46.5
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 1.5e-34 150.2 164 48.2
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 1.2e-33 147.1 165 47.9
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 3.6e-33 145.6 168 48.8
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.1e-32 142.5 165 46.1
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.1e-32 142.5 165 46.1
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.1e-32 142.5 165 45.5
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 6.8e-32 141.4 163 47.9
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 6.8e-32 141.4 167 47.3
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 6.8e-32 141.4 131 52.7
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.9e-32 141.0 165 44.8
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 1.5e-31 140.2 165 44.8
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 1.5e-31 140.2 164 44.5
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 1.3e-30 137.1 166 46.4
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 1.7e-30 136.7 164 43.3
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 3.7e-30 135.6 164 47.0
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 8.3e-30 134.4 146 50.7
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 1.9e-29 133.3 166 46.4
QL03p030145 Quercus lobata HOM05D004964 ORTHO05D005918 1.9e-29 133.3 144 52.8
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 1.6e-28 130.2 167 44.3
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 3.5e-28 129.0 165 43.6
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 3.5e-28 129.0 167 41.9
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 6.0e-28 128.3 117 53.8
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 7.8e-28 127.9 117 53.8
ClCG11G010620 Citrullus lanatus HOM05D004964 ORTHO05D005918 3.9e-27 125.6 164 42.1
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 1.5e-26 123.6 165 43.0
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 5.6e-26 121.7 139 45.3
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 9.5e-26 120.9 169 43.8
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 1.2e-25 120.6 168 43.5
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 3.6e-25 119.0 165 40.6
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 3.6e-25 119.0 165 39.4
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 1.4e-24 117.1 152 44.1
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 1.8e-24 116.7 166 42.2
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 2.3e-24 116.3 164 40.2
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 6.8e-24 114.8 166 42.8
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 1.2e-23 114.0 162 38.9
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 1.5e-23 113.6 162 40.7
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 2.0e-23 113.2 161 41.0
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 4.4e-23 112.1 163 37.4
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 5.8e-23 111.7 164 42.7
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 5.8e-23 111.7 167 36.5
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 1.3e-22 110.5 164 37.8
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 1.7e-22 110.2 163 37.4
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 2.2e-22 109.8 163 39.9
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 2.2e-22 109.8 162 40.7
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 2.9e-22 109.4 163 36.8
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 8.3e-22 107.8 115 48.7
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 8.3e-22 107.8 119 48.7
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 1.1e-21 107.5 163 37.4
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 1.4e-21 107.1 164 36.6
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 2.4e-21 106.3 159 39.6
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 5.4e-21 105.1 163 39.3
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 7.1e-21 104.8 164 37.8
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 1.2e-20 104.0 164 42.7
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 2.1e-20 103.2 156 39.7
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 2.1e-20 103.2 156 39.7
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 2.7e-20 102.8 128 45.3
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 6.0e-20 101.7 156 39.7
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 1.0e-19 100.9 156 39.1
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 1.0e-19 100.9 156 39.1
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 1.3e-19 100.5 156 39.1
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 1.7e-19 100.1 156 39.7
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 1.7e-19 100.1 144 39.6
QL03p030376 Quercus lobata HOM05D004964 ORTHO05D005918 3.0e-19 99.4 68 66.2
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 3.9e-19 99.0 166 36.7
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 3.9e-19 99.0 155 36.1
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 6.6e-19 98.2 154 36.4
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.5e-18 97.1 166 37.3
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 1.5e-18 97.1 160 38.8
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 1.9e-18 96.7 164 39.6
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 3.3e-18 95.9 166 36.7
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 3.3e-18 95.9 164 39.0
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 4.3e-18 95.5 162 37.0
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 4.3e-18 95.5 156 39.7
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 9.5e-18 94.4 126 44.4
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 9.5e-18 94.4 164 34.1
TPR.G19618 Trifolium pratense HOM05D004964 ORTHO05D005918 1.2e-17 94.0 105 48.6
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 1.6e-17 93.6 138 42.0
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 2.1e-17 93.2 119 48.7
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 4.7e-17 92.0 132 42.4
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 1.1e-16 90.9 149 37.6
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 1.4e-16 90.5 156 36.5
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 1.8e-16 90.1 126 42.1
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 3.1e-16 89.4 166 32.5
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 3.1e-16 89.4 137 36.5
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 8.9e-16 87.8 164 38.4
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 8.9e-16 87.8 164 38.4
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.2e-15 87.4 115 39.1
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 2.6e-15 86.3 168 36.3
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 3.4e-15 85.9 78 56.4
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 7.6e-15 84.7 146 33.6
SalBow6G5984 Salvia bowleyana HOM05D004964 ORTHO05D005918 2.2e-14 83.2 155 34.2
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 2.9e-14 82.8 152 30.9
Aa31LG1G4790 Aethionema arabicum HOM05D004964 ORTHO05D005918 6.4e-14 81.6 125 39.2
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 1.9e-13 80.1 80 50.0
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 5.4e-13 78.6 118 38.1
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 5.4e-13 78.6 140 37.9
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 7.1e-13 78.2 152 30.9
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 2.7e-12 76.3 166 30.1
BolC9t55571H Brassica oleracea HOM05D004964 ORTHO05D005918 1.7e-11 73.6 154 36.4
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 3.0e-11 72.8 126 40.5
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 5.1e-11 72.0 142 37.3
BcaC04g21837 Brassica carinata HOM05D004964 ORTHO05D005918 1.1e-10 70.9 140 36.4
C09p26820 Brassica napus HOM05D004964 ORTHO05D005918 1.2e-09 67.4 71 50.7
CDE04G0768 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 1.2e-09 67.4 160 27.5
Oeu012237.1 Olea europaea HOM05D004964 ORTHO05D005918 5.2e-08 62.0 68 47.1
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 1.7e-06 57.0 110 30.0


User provided reference genes

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