Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04314 Corylus avellana HOM05D004408 ORTHO05D005486 2.5e-184 648.7 339 100.0
Cfa006478 Carpinus fangiana HOM05D004408 ORTHO05D005486 6.7e-153 544.3 340 87.1
QL03p022358 Quercus lobata HOM05D004408 ORTHO05D005486 3.6e-138 495.4 341 79.5
CiPaw.07G007800 Carya illinoinensis HOM05D004408 ORTHO05D005486 5.7e-136 488.0 340 78.2
Dinv05121 Davidia involucrata HOM05D004408 ORTHO05D005486 1.0e-129 467.2 283 86.2
CSS0006895 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 4.1e-126 455.3 340 73.8
CSS0009913 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 7.0e-126 454.5 340 73.8
Ciclev10000022m.g Citrus clementina HOM05D004408 ORTHO05D005486 9.2e-126 454.1 283 83.4
Atru.chr2.666 Acer truncatum HOM05D004408 ORTHO05D005486 1.2e-125 453.8 340 72.4
TWI56G0724 Tripterygium wilfordii HOM05D004408 ORTHO05D005486 3.0e-124 449.1 341 72.4
CANSAT54G0296 Cannabis sativa HOM05D004408 ORTHO05D005486 5.0e-124 448.4 342 71.6
TAR365G0706 Trochodendron aralioides HOM05D004408 ORTHO05D005486 2.5e-123 446.0 340 71.8
Prupe.6G338000 Prunus persica HOM05D004408 ORTHO05D005486 3.3e-123 445.7 340 73.2
Thecc.05G290600 Theobroma cacao HOM05D004408 ORTHO05D005486 9.5e-123 444.1 329 72.0
GSVIVG01021873001 Vitis vinifera HOM05D004408 ORTHO05D005486 6.2e-122 441.4 340 71.2
RcHm_v2.0_Chr3g0461321 Rosa chinensis HOM05D004408 ORTHO05D005486 8.0e-122 441.0 338 71.6
FvH4_6g10420 Fragaria vesca HOM05D004408 ORTHO05D005486 8.9e-121 437.6 338 70.7
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 8.9e-121 437.6 338 70.7
Lalb_Chr06g0167911 Lupinus albus HOM05D004408 ORTHO05D005486 8.9e-121 437.6 340 71.8
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.0e-120 436.4 338 70.4
Manes.09G157400 Manihot esculenta HOM05D004408 ORTHO05D005486 3.4e-120 435.6 340 69.7
COL.COLO4_15257 Corchorus olitorius HOM05D004408 ORTHO05D005486 4.4e-120 435.3 327 71.9
MD04G1218000 Malus domestica HOM05D004408 ORTHO05D005486 4.4e-120 435.3 340 70.9
Potri.013G035100 Populus trichocarpa HOM05D004408 ORTHO05D005486 4.4e-120 435.3 340 71.8
Duzib177G0039 Durio zibethinus HOM05D004408 ORTHO05D005486 9.8e-120 434.1 329 71.1
Medtr1g081710 Medicago truncatula HOM05D004408 ORTHO05D005486 1.7e-119 433.3 342 70.8
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.2e-119 433.0 338 70.1
Rhsim05G0150300 Rhododendron simsii HOM05D004408 ORTHO05D005486 2.9e-119 432.6 283 80.6
Phvul.007G184950 Phaseolus vulgaris HOM05D004408 ORTHO05D005486 1.9e-118 429.9 340 70.0
TPR.G11136 Trifolium pratense HOM05D004408 ORTHO05D005486 1.9e-118 429.9 339 70.5
Lj5g0005673 Lotus japonicus HOM05D004408 ORTHO05D005486 4.1e-118 428.7 341 70.4
PGR083G2727 Punica granatum HOM05D004408 ORTHO05D005486 4.1e-118 428.7 340 69.4
Ca_10066_v3 Cicer arietinum L. HOM05D004408 ORTHO05D005486 9.2e-118 427.6 340 70.6
Glyma.20G229100 Glycine max HOM05D004408 ORTHO05D005486 9.2e-118 427.6 340 71.2
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 1.2e-117 427.2 283 80.2
Glyma.10G159500 Glycine max HOM05D004408 ORTHO05D005486 2.1e-117 426.4 340 70.9
ClCG03G016280 Citrullus lanatus HOM05D004408 ORTHO05D005486 6.6e-116 421.4 340 68.5
VMungo0720G1928 Vigna mungo HOM05D004408 ORTHO05D005486 6.6e-116 421.4 340 69.4
Lj7A478T83 Lonicera japonica HOM05D004408 ORTHO05D005486 5.6e-115 418.3 283 77.4
Nitab4.5_0000162g0030 Nicotiana tabacum HOM05D004408 ORTHO05D005486 5.6e-115 418.3 340 66.8
Nn1g02333 Nelumbo nucifera HOM05D004408 ORTHO05D005486 9.5e-115 417.5 336 69.0
Sc06g0003710 Simmondsia chinensis HOM05D004408 ORTHO05D005486 1.2e-114 417.2 345 68.7
CAN.G167.11 Capsicum annuum HOM05D004408 ORTHO05D005486 2.1e-114 416.4 340 66.8
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea HOM05D004408 ORTHO05D005486 2.8e-114 416.0 340 69.1
CsaV3_1G039670 Cucumis sativus L. HOM05D004408 ORTHO05D005486 2.8e-114 416.0 340 67.9
MELO3C015391.2 Cucumis melo HOM05D004408 ORTHO05D005486 8.1e-114 414.5 340 67.4
Psat6g147800 Pisum sativum HOM05D004408 ORTHO05D005486 8.1e-114 414.5 340 68.8
Solyc09g018370.4 Solanum lycopersicum HOM05D004408 ORTHO05D005486 1.4e-113 413.7 340 66.2
Sopen09g011530 Solanum pennellii HOM05D004408 ORTHO05D005486 1.8e-113 413.3 340 66.2
Gohir.A11G256300 Gossypium hirsutum HOM05D004408 ORTHO05D005486 9.9e-112 407.5 327 68.8
Gohir.D11G266000 Gossypium hirsutum HOM05D004408 ORTHO05D005486 1.3e-111 407.1 327 68.8
Gorai.007G286000 Gossypium raimondii HOM05D004408 ORTHO05D005486 1.3e-111 407.1 327 68.8
MBI05_g21270_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 1.7e-111 406.8 340 67.6
Lalb_Chr21g0310861 Lupinus albus HOM05D004408 ORTHO05D005486 2.2e-111 406.4 340 67.6
Peaxi162Scf01040g00010 Petunia axillaris HOM05D004408 ORTHO05D005486 2.9e-111 406.0 338 65.4
Sed0014385 Sechium edule HOM05D004408 ORTHO05D005486 4.9e-111 405.2 337 66.8
Sp2g20340 Schrenkiella parvula HOM05D004408 ORTHO05D005486 1.1e-110 404.1 330 69.1
Ah.04g162440 Amaranthus hybridus HOM05D004408 ORTHO05D005486 1.4e-110 403.7 340 65.3
THA.LOC104818650 Tarenaya hassleriana HOM05D004408 ORTHO05D005486 1.9e-110 403.3 330 68.2
Thhalv10003510m.g Eutrema salsugineum HOM05D004408 ORTHO05D005486 2.4e-110 402.9 330 67.9
Aqoxy2G03396 Aquilegia oxysepala HOM05D004408 ORTHO05D005486 5.4e-110 401.7 340 67.1
AL6G40140 Arabidopsis lyrata HOM05D004408 ORTHO05D005486 1.6e-109 400.2 330 67.9
EL10Ac4g09198 Beta vulgaris HOM05D004408 ORTHO05D005486 2.7e-109 399.4 331 67.7
BcaC03g17767 Brassica carinata HOM05D004408 ORTHO05D005486 2.7e-109 399.4 330 67.9
C02p57800 Brassica napus HOM05D004408 ORTHO05D005486 2.7e-109 399.4 330 67.9
Cc02_g31380 Coffea canephora HOM05D004408 ORTHO05D005486 2.7e-109 399.4 341 65.7
PSO761G0213 Papaver somniferum HOM05D004408 ORTHO05D005486 3.5e-109 399.1 341 65.4
AUR62005003 Chenopodium quinoa HOM05D004408 ORTHO05D005486 4.6e-109 398.7 340 65.6
DCAR_001927 Daucus carota HOM05D004408 ORTHO05D005486 6.0e-109 398.3 294 73.1
BolC2t11853H Brassica oleracea HOM05D004408 ORTHO05D005486 1.3e-108 397.1 330 67.6
arahy.Tifrunner.gnm1.ann1.N9X86H Arachis hypogaea HOM05D004408 ORTHO05D005486 1.7e-108 396.7 340 67.4
AUR62000963 Chenopodium quinoa HOM05D004408 ORTHO05D005486 1.7e-108 396.7 340 65.3
AT5G27970 Arabidopsis thaliana HOM05D004408 ORTHO05D005486 2.3e-108 396.4 330 67.3
Carub.0006s2545 Capsella rubella HOM05D004408 ORTHO05D005486 3.0e-108 396.0 327 67.0
A02p38480 Brassica napus HOM05D004408 ORTHO05D005486 3.9e-108 395.6 330 67.3
BraA02t08826Z Brassica rapa HOM05D004408 ORTHO05D005486 3.9e-108 395.6 330 67.3
PSO210G7697 Papaver somniferum HOM05D004408 ORTHO05D005486 3.9e-108 395.6 341 64.8
Migut.B01071 Erythranthe guttata HOM05D004408 ORTHO05D005486 2.5e-107 392.9 340 64.4
Eucgr.B01725 Eucalyptus grandis HOM05D004408 ORTHO05D005486 2.5e-107 392.9 344 64.8
BcaB07g34188 Brassica carinata HOM05D004408 ORTHO05D005486 3.3e-107 392.5 330 67.0
MSTRG.20441 Avicennia marina HOM05D004408 ORTHO05D005486 2.1e-106 389.8 285 72.6
A06p37770 Brassica napus HOM05D004408 ORTHO05D005486 1.8e-105 386.7 330 67.0
BraA06t26696Z Brassica rapa HOM05D004408 ORTHO05D005486 1.8e-105 386.7 330 67.0
C07p40460 Brassica napus HOM05D004408 ORTHO05D005486 2.4e-105 386.3 330 67.0
BolC7t44581H Brassica oleracea HOM05D004408 ORTHO05D005486 2.4e-105 386.3 330 67.0
BcaNung04259 Brassica carinata HOM05D004408 ORTHO05D005486 1.5e-104 383.6 329 66.0
ECA232G0933 Erigeron canadensis HOM05D004408 ORTHO05D005486 9.9e-104 380.9 339 64.0
Lsat_1_v5_gn_4_142681 Lactuca sativa HOM05D004408 ORTHO05D005486 1.1e-102 377.5 339 63.1
HanXRQChr11g0322991 Helianthus annuus HOM05D004408 ORTHO05D005486 2.4e-102 376.3 338 63.0
Aa31LG11G8830 Aethionema arabicum HOM05D004408 ORTHO05D005486 3.2e-102 375.9 367 60.2
CDE10G0751 Ceratophyllum demersum HOM05D004408 ORTHO05D005486 5.1e-100 368.6 283 69.6
ATR0697G205 Amborella trichopoda HOM05D004408 ORTHO05D005486 7.3e-99 364.8 342 61.1
SalBow8G3789 Salvia bowleyana HOM05D004408 ORTHO05D005486 9.0e-89 331.3 283 64.0
Nitab4.5_0000921g0010 Nicotiana tabacum HOM05D004408 ORTHO05D005486 2.5e-83 313.2 213 75.6
HPP92_012131 Vanilla planifolia HOM05D004408 ORTHO05D005486 4.8e-82 308.9 212 75.5
SHI08350 Sapria himalayana HOM05D004408 ORTHO05D005486 1.3e-74 284.3 337 50.7
SMO169G0216 Selaginella moellendorffii HOM05D004408 ORTHO05D005486 6.9e-73 278.5 286 51.0
Hund06994 Selenicereus undatus HOM05D004408 ORTHO05D005486 2.0e-72 276.9 342 50.9
AagrBONN_evm.TU.Sc2ySwM_228.3627 Anthoceros agrestis HOM05D004408 ORTHO05D005486 1.6e-69 267.3 359 46.5
Eucgr.L01484 Eucalyptus grandis HOM05D004408 ORTHO05D005486 8.8e-60 235.0 212 60.4
Mapoly0167s0007 Marchantia polymorpha HOM05D004408 ORTHO05D005486 5.7e-59 232.3 376 41.8
vmacro19678 Vaccinium macrocarpon HOM05D004408 ORTHO05D005486 1.4e-57 227.6 501 35.9
CBR_g18881 Chara braunii HOM05D004408 ORTHO05D005486 1.1e-51 208.0 360 38.3
SEGI_02301 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 3.3e-51 206.5 259 45.9
Pp3c17_790 Physcomitrium patens HOM05D004408 ORTHO05D005486 1.0e-47 194.9 323 36.8
HPP92_012122 Vanilla planifolia HOM05D004408 ORTHO05D005486 2.9e-47 193.4 281 43.1
Hma1.2p1_0083F.1_g042740 Hydrangea macrophylla HOM05D004408 ORTHO05D005486 9.4e-46 188.3 127 74.8
arahy.Tifrunner.gnm1.ann1.L7F5GT Arachis hypogaea HOM05D004408 ORTHO05D005486 3.0e-44 183.3 178 57.9
CBR_g23067 Chara braunii HOM05D004408 ORTHO05D005486 8.8e-44 181.8 355 35.5
Cpa.g.sc117.51 Carica papaya HOM05D004408 ORTHO05D005486 1.7e-34 151.0 167 53.9
FAN05G3761 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.0e-32 144.1 152 54.6
Os01g0772700 Oryza sativa ssp. japonica HOM05D004408 ORTHO05D005486 8.8e-28 128.6 265 37.0
SEGI_37886 Sequoiadendron giganteum HOM05D004408 ORTHO05D005486 5.9e-24 115.9 70 87.1
PRCOL_00003187 Prasinoderma coloniale HOM05D004408 ORTHO05D005486 2.1e-21 107.5 328 27.4
Glyma.08G365650 Glycine max HOM05D004408 ORTHO05D005486 1.4e-20 104.8 67 74.6
unitig_0.g2223 Utricularia gibba HOM05D004408 ORTHO05D005486 2.6e-19 100.5 214 38.3
CARHR185700 Cardamine hirsuta HOM05D004408 ORTHO05D005486 5.4e-17 92.8 107 52.3
Cpa.g.sc117.53 Carica papaya HOM05D004408 ORTHO05D005486 3.4e-11 73.6 99 49.5
Cre13.g575250 Chlamydomonas reinhardtii HOM05D004408 ORTHO05D005486 1.0e-07 62.0 51 56.9


User provided reference genes

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