Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 9.4e-136 486.9 248 100.0
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 3.2e-128 461.8 248 95.6
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 8.2e-116 420.6 246 86.6
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 4.8e-108 394.8 247 83.4
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 1.3e-100 370.2 246 76.8
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 8.3e-100 367.5 249 77.5
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 1.1e-99 367.1 250 75.6
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 5.4e-99 364.8 246 76.4
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 9.1e-99 364.0 248 76.2
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 2.7e-98 362.5 248 78.2
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 1.7e-97 359.8 250 75.2
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 5.0e-97 358.2 245 76.3
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 6.6e-97 357.8 249 75.5
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 8.6e-97 357.5 252 76.2
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 2.0e-93 346.3 248 73.0
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 3.4e-93 345.5 241 73.0
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 5.7e-93 344.7 247 72.9
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 2.2e-92 342.8 245 72.7
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 3.7e-92 342.0 246 74.4
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 4.9e-92 341.7 254 70.9
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 6.3e-92 341.3 246 71.1
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 1.4e-91 340.1 251 72.1
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 4.1e-91 338.6 245 73.1
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 5.4e-91 338.2 212 80.7
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 7.0e-91 337.8 251 71.3
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 7.0e-91 337.8 227 76.7
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 2.0e-90 336.3 251 70.5
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 3.5e-90 335.5 246 70.3
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 3.5e-90 335.5 257 71.2
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 2.9e-89 332.4 248 72.6
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.5e-88 330.1 245 69.8
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 2.5e-88 329.3 251 70.9
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 5.6e-88 328.2 258 66.7
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 6.1e-87 324.7 231 73.6
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 6.1e-87 324.7 263 67.3
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.4e-86 323.6 248 69.0
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.4e-86 323.6 248 69.0
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 1.8e-86 323.2 249 70.3
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.3e-86 322.8 245 68.6
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.3e-86 322.8 245 68.6
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 4.0e-86 322.0 249 69.9
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 1.5e-85 320.1 246 69.1
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 1.3e-84 317.0 255 66.7
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 1.7e-84 316.6 236 68.6
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 2.2e-84 316.2 245 67.3
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.9e-84 315.8 291 61.9
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 8.3e-84 314.3 244 66.8
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 1.1e-83 313.9 245 65.7
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 4.1e-83 312.0 245 65.7
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 5.4e-83 311.6 245 66.1
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 5.4e-83 311.6 278 61.2
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 7.0e-83 311.2 245 65.3
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 9.2e-83 310.8 245 66.5
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 1.6e-82 310.1 245 66.5
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 2.0e-82 309.7 245 65.7
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 2.7e-82 309.3 248 66.9
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 2.7e-82 309.3 234 69.2
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 4.6e-82 308.5 245 69.0
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 6.6e-81 304.7 245 65.7
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 8.6e-81 304.3 254 64.6
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 1.5e-80 303.5 246 65.0
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 1.9e-80 303.1 251 63.3
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.9e-80 303.1 241 66.8
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 2.5e-80 302.8 174 82.2
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 4.3e-80 302.0 246 66.3
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 5.6e-80 301.6 229 68.1
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 1.2e-79 300.4 236 68.2
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 1.2e-79 300.4 238 68.5
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.6e-79 300.1 253 65.6
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 1.1e-78 297.4 255 63.9
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 1.1e-78 297.4 257 63.0
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 1.1e-78 297.4 257 63.0
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 1.1e-78 297.4 252 63.5
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 1.4e-78 297.0 231 66.7
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 6.8e-78 294.7 177 80.8
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 2.0e-77 293.1 232 67.2
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 4.4e-77 292.0 239 64.4
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 5.8e-77 291.6 239 64.9
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 9.8e-77 290.8 232 65.5
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 1.3e-76 290.4 232 65.1
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 1.3e-76 290.4 246 63.8
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 1.9e-75 286.6 218 66.5
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 4.1e-75 285.4 247 65.2
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 7.0e-75 284.6 256 58.2
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 1.6e-74 283.5 241 62.2
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 1.6e-74 283.5 162 82.1
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 3.5e-74 282.3 249 62.7
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 2.3e-73 279.6 252 59.1
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 5.1e-73 278.5 252 59.1
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 1.9e-72 276.6 237 62.4
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 6.2e-71 271.6 208 66.8
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 1.1e-70 270.8 242 57.4
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 6.8e-70 268.1 273 57.9
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 1.9e-67 260.0 232 62.5
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 4.1e-67 258.8 230 57.4
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 4.1e-67 258.8 237 59.5
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 6.0e-66 255.0 217 60.4
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 3.0e-65 252.7 185 62.7
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 3.3e-64 249.2 144 85.4
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 2.1e-63 246.5 217 61.8
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 3.6e-63 245.7 217 58.5
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 6.2e-63 245.0 144 83.3
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.7e-57 226.9 166 71.7
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 4.3e-56 222.2 175 65.1
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.5e-53 213.8 238 55.5
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 1.0e-49 201.1 134 73.1
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 1.6e-47 193.7 175 60.0
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 6.2e-47 191.8 156 67.9
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 5.3e-46 188.7 191 48.2
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 1.6e-42 177.2 192 46.4
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 1.9e-40 170.2 176 46.0
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 1.3e-39 167.5 95 86.3
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 6.2e-39 165.2 167 48.5
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.4e-38 164.1 136 67.6
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 9.0e-38 161.4 145 63.4
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 9.9e-37 157.9 164 56.1
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 2.0e-29 133.7 96 67.7
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 7.4e-24 115.2 68 79.4
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 2.4e-14 83.6 177 29.9
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 9.1e-14 81.6 132 34.1
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 2.1e-10 70.5 238 26.1
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 2.2e-07 60.5 49 59.2
HPP92_013649 Vanilla planifolia HOM05D006710 ORTHO05D008353 3.7e-07 59.7 35 77.1


User provided reference genes

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