Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04209 Corylus avellana HOM05D006625 ORTHO05D008060 4.2e-141 504.6 242 100.0
Cfa006572 Carpinus fangiana HOM05D006625 ORTHO05D008060 6.3e-121 437.6 237 89.0
QL03p005837 Quercus lobata HOM05D006625 ORTHO05D008060 3.2e-104 382.1 236 77.1
CiPaw.07G016100 Carya illinoinensis HOM05D006625 ORTHO05D008060 3.5e-103 378.6 237 76.4
arahy.Tifrunner.gnm1.ann1.P1SK02 Arachis hypogaea HOM05D006625 ORTHO05D008060 2.1e-92 342.8 237 67.1
arahy.Tifrunner.gnm1.ann1.A4Z4CH Arachis hypogaea HOM05D006625 ORTHO05D008060 4.7e-92 341.7 237 67.1
Dinv40271 Davidia involucrata HOM05D006625 ORTHO05D008060 1.7e-89 333.2 237 67.9
GSVIVG01000035001 Vitis vinifera HOM05D006625 ORTHO05D008060 1.7e-89 333.2 237 67.1
CANSAT54G0428 Cannabis sativa HOM05D006625 ORTHO05D008060 2.9e-89 332.4 237 65.4
Ciclev10002145m.g Citrus clementina HOM05D006625 ORTHO05D008060 4.9e-89 331.6 237 66.7
Lalb_Chr21g0310751 Lupinus albus HOM05D006625 ORTHO05D008060 4.2e-88 328.6 237 66.2
Prupe.6G327800 Prunus persica HOM05D006625 ORTHO05D008060 4.2e-88 328.6 228 69.7
Glyma.10G155500 Glycine max HOM05D006625 ORTHO05D008060 5.4e-88 328.2 234 66.2
Glyma.20G232800 Glycine max HOM05D006625 ORTHO05D008060 5.4e-88 328.2 234 66.2
Lj5g0018133 Lotus japonicus HOM05D006625 ORTHO05D008060 3.5e-87 325.5 237 65.8
Psat6g149480 Pisum sativum HOM05D006625 ORTHO05D008060 3.9e-86 322.0 237 64.1
Manes.09G165400 Manihot esculenta HOM05D006625 ORTHO05D008060 2.5e-85 319.3 239 65.3
Hma1.2p1_0617F.1_g190230 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 4.3e-85 318.5 237 64.1
Ca_10103_v3 Cicer arietinum L. HOM05D006625 ORTHO05D008060 2.1e-84 316.2 237 64.6
Medtr1g082740 Medicago truncatula HOM05D006625 ORTHO05D008060 1.8e-83 313.2 241 64.3
VMungo0720G0027 Vigna mungo HOM05D006625 ORTHO05D008060 4.0e-83 312.0 234 62.8
Potri.005G035600 Populus trichocarpa HOM05D006625 ORTHO05D008060 6.9e-83 311.2 233 63.1
TPR.G6108 Trifolium pratense HOM05D006625 ORTHO05D008060 2.6e-82 309.3 238 63.0
Cpa.g.sc48.33 Carica papaya HOM05D006625 ORTHO05D008060 3.4e-82 308.9 237 63.7
Actinidia19797 Actinidia chinensis HOM05D006625 ORTHO05D008060 9.9e-82 307.4 234 65.4
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 9.9e-82 307.4 244 62.3
CSS0023168 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 2.2e-81 306.2 237 63.7
RcHm_v2.0_Chr3g0454381 Rosa chinensis HOM05D006625 ORTHO05D008060 8.4e-81 304.3 231 64.5
Sabra05G0036200 Salix brachista HOM05D006625 ORTHO05D008060 8.4e-81 304.3 233 61.4
FAN14G5181 Fragaria x ananassa HOM05D001310 ORTHO05D008060 1.4e-80 303.5 231 65.4
TAR362G1087 Trochodendron aralioides HOM05D006625 ORTHO05D008060 1.4e-80 303.5 237 62.0
Duzib106G0694 Durio zibethinus HOM05D006625 ORTHO05D008060 1.9e-80 303.1 236 63.6
FAN05G0213 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.4e-80 302.8 231 64.9
MD04G1207100 Malus domestica HOM05D006625 ORTHO05D008060 3.2e-80 302.4 230 64.3
Phvul.007G181000 Phaseolus vulgaris HOM05D006625 ORTHO05D008060 4.2e-80 302.0 234 61.1
FAN14G5649 Fragaria x ananassa HOM05D001310 ORTHO05D008060 5.4e-80 301.6 231 64.9
FvH4_6g05630 Fragaria vesca HOM05D006625 ORTHO05D008060 1.2e-79 300.4 231 63.6
FAN09G2049 Fragaria x ananassa HOM05D001310 ORTHO05D008060 2.1e-79 299.7 231 64.5
FAN02G3749 Fragaria x ananassa HOM05D006625 ORTHO05D008060 2.7e-79 299.3 231 64.1
Rhsim05G0143100 Rhododendron simsii HOM05D006625 ORTHO05D008060 2.7e-79 299.3 237 61.6
Thecc.05G305300 Theobroma cacao HOM05D006625 ORTHO05D008060 2.3e-78 296.2 239 60.3
CsaV3_2G005130 Cucumis sativus L. HOM05D006625 ORTHO05D008060 3.0e-78 295.8 237 59.9
THA.LOC104821879 Tarenaya hassleriana HOM05D006625 ORTHO05D008060 3.9e-78 295.4 234 58.5
ClCG02G015910 Citrullus lanatus HOM05D006625 ORTHO05D008060 4.3e-77 292.0 237 59.9
Lj5A588T21 Lonicera japonica HOM05D006625 ORTHO05D008060 9.6e-77 290.8 244 58.2
vmacro19631 Vaccinium macrocarpon HOM05D006625 ORTHO05D008060 1.3e-76 290.4 237 60.8
Lj5A9T24 Lonicera japonica HOM05D006625 ORTHO05D008060 2.1e-76 289.7 245 58.8
Lj5A588T22 Lonicera japonica HOM05D006625 ORTHO05D008060 6.2e-76 288.1 244 58.6
COL.COLO4_13497 Corchorus olitorius HOM05D006625 ORTHO05D008060 1.1e-75 287.3 234 60.3
Lj5A576T32 Lonicera japonica HOM05D006625 ORTHO05D008060 3.1e-75 285.8 244 58.2
Lj5A11T18 Lonicera japonica HOM05D006625 ORTHO05D008060 4.0e-75 285.4 244 58.2
Aa31LG5G15780 Aethionema arabicum HOM05D006625 ORTHO05D008060 9.0e-75 284.3 240 57.9
Sc16g0008430 Simmondsia chinensis HOM05D006625 ORTHO05D008060 9.0e-75 284.3 233 58.4
TWI56G0867 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 2.2e-73 279.6 248 58.1
Nitab4.5_0002031g0060 Nicotiana tabacum HOM05D006625 ORTHO05D008060 8.4e-73 277.7 237 57.8
Hund07059 Selenicereus undatus HOM05D006625 ORTHO05D008060 1.9e-72 276.6 238 55.9
Sopen01g042370 Solanum pennellii HOM05D006625 ORTHO05D008060 3.2e-72 275.8 237 56.5
Eucgr.H04479 Eucalyptus grandis HOM05D006625 ORTHO05D008060 5.4e-72 275.0 237 56.5
Nitab4.5_0005388g0010 Nicotiana tabacum HOM05D006625 ORTHO05D008060 5.4e-72 275.0 237 57.0
Oeu043355.5 Olea europaea HOM05D006625 ORTHO05D008060 5.4e-72 275.0 237 57.4
Cc00_g15580 Coffea canephora HOM05D006625 ORTHO05D008060 1.2e-71 273.9 236 58.1
Solyc01g098830.3 Solanum lycopersicum HOM05D006625 ORTHO05D008060 1.2e-71 273.9 237 56.1
Gohir.A11G000800 Gossypium hirsutum HOM05D006625 ORTHO05D008060 2.1e-71 273.1 239 57.7
PGSC0003DMG400028585 Solanum tuberosum HOM05D006625 ORTHO05D008060 2.1e-71 273.1 237 56.1
Gohir.D11G000400 Gossypium hirsutum HOM05D006625 ORTHO05D008060 6.0e-71 271.6 235 57.9
Gorai.007G001300 Gossypium raimondii HOM05D006625 ORTHO05D008060 6.0e-71 271.6 239 56.9
C05p61940 Brassica napus HOM05D006625 ORTHO05D008060 7.9e-71 271.2 238 55.0
Thhalv10021312m.g Eutrema salsugineum HOM05D006625 ORTHO05D008060 1.8e-70 270.0 239 54.4
BolC5t34854H Brassica oleracea HOM05D006625 ORTHO05D008060 5.1e-70 268.5 238 54.6
DCAR_029427 Daucus carota HOM05D006625 ORTHO05D008060 5.1e-70 268.5 231 55.4
AL3G15690 Arabidopsis lyrata HOM05D006625 ORTHO05D008060 1.5e-69 266.9 240 56.2
BraA05t23018Z Brassica rapa HOM05D006625 ORTHO05D008060 2.1e-68 263.1 238 54.6
BcaC05g30013 Brassica carinata HOM05D006625 ORTHO05D008060 4.8e-68 261.9 238 54.2
A05p42330 Brassica napus HOM05D006625 ORTHO05D008060 4.8e-68 261.9 238 54.2
Peaxi162Scf00037g00234 Petunia axillaris HOM05D006625 ORTHO05D008060 1.4e-67 260.4 247 55.5
Nn4g26222 Nelumbo nucifera HOM05D006625 ORTHO05D008060 2.4e-67 259.6 237 51.9
Sp3g04100 Schrenkiella parvula HOM05D006625 ORTHO05D008060 4.0e-67 258.8 238 52.9
Carub.0003s0450 Capsella rubella HOM05D006625 ORTHO05D008060 1.2e-66 257.3 241 53.1
PGR031G0551 Punica granatum HOM05D006625 ORTHO05D008060 3.4e-66 255.8 237 54.0
ECA238G3785 Erigeron canadensis HOM05D006625 ORTHO05D008060 1.0e-65 254.2 233 55.8
MSTRG.28006 Avicennia marina HOM05D006625 ORTHO05D008060 2.2e-65 253.1 233 54.9
EL10Ac4g09338 Beta vulgaris HOM05D006625 ORTHO05D008060 3.8e-65 252.3 241 51.9
BcaC05g30142 Brassica carinata HOM05D006625 ORTHO05D008060 3.8e-65 252.3 239 53.1
Sed0016985 Sechium edule HOM05D006625 ORTHO05D008060 4.9e-65 251.9 236 53.4
Aqoxy2G03295 Aquilegia oxysepala HOM05D006625 ORTHO05D008060 8.4e-65 251.1 233 50.2
Lsat_1_v5_gn_2_64300 Lactuca sativa HOM05D006625 ORTHO05D008060 2.1e-63 246.5 235 54.9
HanXRQChr10g0295051 Helianthus annuus HOM05D006625 ORTHO05D008060 1.8e-62 243.4 233 53.2
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 6.2e-60 235.0 231 50.2
PSO339G1258 Papaver somniferum HOM05D006625 ORTHO05D008060 2.6e-58 229.6 244 48.8
AT3G05250 Arabidopsis thaliana HOM05D006625 ORTHO05D008060 3.4e-58 229.2 207 55.6
ATR0626G410 Amborella trichopoda HOM05D006625 ORTHO05D008060 1.0e-57 227.6 233 50.2
Migut.N01952 Erythranthe guttata HOM05D006625 ORTHO05D008060 6.5e-57 224.9 235 48.1
TWI77G0294 Tripterygium wilfordii HOM05D006625 ORTHO05D008060 1.1e-56 224.2 199 57.8
SGA_v2.0_scaffold81G26083 Striga asiatica HOM05D006625 ORTHO05D008060 4.2e-56 222.2 236 50.0
CARHR079590 Cardamine hirsuta HOM05D006625 ORTHO05D008060 6.1e-55 218.4 209 51.7
Rhsim05G0144100 Rhododendron simsii HOM05D006625 ORTHO05D008060 2.3e-54 216.5 240 49.6
AUR62005130 Chenopodium quinoa HOM05D006625 ORTHO05D008060 2.4e-51 206.5 174 57.5
QL03p006436 Quercus lobata HOM05D006625 ORTHO05D008060 3.4e-50 202.6 117 76.9
MELO3C004279.2 Cucumis melo HOM05D006625 ORTHO05D008060 7.9e-47 191.4 142 60.6
CDE11G1261 Ceratophyllum demersum HOM05D006625 ORTHO05D008060 3.3e-45 186.0 233 40.8
PSO801G0350 Papaver somniferum HOM05D000048 ORTHO05D000207 4.3e-45 185.7 180 50.6
MD12G1221000 Malus domestica HOM05D006625 ORTHO05D008060 1.3e-44 184.1 136 66.2
Zm00001eb212380 Zea mays HOM05D006625 ORTHO05D008060 1.7e-44 183.7 238 42.4
AUR62000843 Chenopodium quinoa HOM05D006625 ORTHO05D008060 4.2e-40 169.1 173 48.0
MBI19_g05826_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 1.2e-39 167.5 116 68.1
Lj5A1T20 Lonicera japonica HOM05D006625 ORTHO05D008060 4.7e-39 165.6 246 42.7
unitig_578.g16758 Utricularia gibba HOM05D004142 ORTHO05D005411 1.8e-38 163.7 221 40.7
SEGI_37357 Sequoiadendron giganteum HOM05D006625 ORTHO05D008060 1.5e-37 160.6 200 41.0
Lj5A1T18 Lonicera japonica HOM05D006625 ORTHO05D008060 2.8e-36 156.4 247 41.7
Lj5A11T17 Lonicera japonica HOM05D006625 ORTHO05D008060 3.6e-31 139.4 131 58.0
COL.COLO4_10909 Corchorus olitorius HOM05D006625 ORTHO05D008060 1.0e-30 137.9 218 41.3
Os03g0809800 Oryza sativa ssp. japonica HOM05D006625 ORTHO05D008060 8.8e-30 134.8 176 43.8
Hma1.2p1_0617F.1_g190240 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 9.7e-29 131.3 103 61.2
FAN05G4155 Fragaria x ananassa HOM05D001310 ORTHO05D001283 2.2e-28 130.2 116 59.5
Lj5A18T33 Lonicera japonica HOM05D006625 ORTHO05D008060 5.0e-25 119.0 108 56.5
AagrBONN_evm.TU.Sc2ySwM_362.2578 Anthoceros agrestis HOM05D006625 ORTHO05D008060 6.5e-25 118.6 203 33.5
Lj5A10T21 Lonicera japonica HOM05D006625 ORTHO05D008060 1.9e-24 117.1 110 55.5
Mapoly0224s0007 Marchantia polymorpha HOM05D006625 ORTHO05D008060 5.5e-24 115.5 201 34.8
BolC3t17028H Brassica oleracea HOM05D006625 ORTHO05D008060 1.2e-21 107.8 221 32.6
MD12G1221200 Malus domestica HOM05D006625 ORTHO05D008060 2.7e-18 96.7 59 74.6
MBI19_g05827_MAGBIO Magnolia biondii HOM05D006625 ORTHO05D008060 2.9e-17 93.2 130 40.0
Pp3c3_27350 Physcomitrium patens HOM05D006625 ORTHO05D008060 9.4e-16 88.2 221 28.1
Atru.chr2.446 Acer truncatum HOM05D000091 ORTHO05D009985 2.0e-13 80.5 59 62.7
HPP92_025561 Vanilla planifolia HOM05D006625 ORTHO05D008060 8.3e-12 75.1 64 57.8
CBR_g7977 Chara braunii HOM05D006625 ORTHO05D008060 7.0e-11 72.0 122 36.9
CSS0021359 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 1.0e-06 58.2 86 38.4
MD13G1171700 Malus domestica HOM05D007775 ORTHO05D009858 1.4e-06 57.8 90 41.1
CiPaw.02G085200 Carya illinoinensis HOM05D007775 ORTHO05D009858 3.0e-06 56.6 90 34.4
Prupe.1G140100 Prunus persica HOM05D007775 ORTHO05D009858 5.2e-06 55.8 92 42.4
Cfa015361 Carpinus fangiana HOM05D007775 ORTHO05D009858 8.9e-06 55.1 89 40.4
FAN07G2931 Fragaria x ananassa HOM05D007775 ORTHO05D009858 8.9e-06 55.1 95 32.6


User provided reference genes

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