Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_04191 Corylus avellana HOM05D006774 ORTHO05D008411 9.6e-273 943.0 498 100.0
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 2.0e-217 759.2 412 94.2
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 5.6e-188 661.4 412 79.6
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 2.3e-181 639.4 414 77.1
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 1.7e-144 516.9 353 69.7
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 7.1e-143 511.5 417 62.8
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 9.3e-143 511.1 407 63.6
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 4.6e-142 508.8 357 69.7
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 1.0e-141 507.7 361 69.5
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.8e-141 506.9 354 67.8
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 5.6e-140 501.9 362 67.4
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 5.6e-140 501.9 407 64.1
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 2.8e-139 499.6 420 64.3
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 4.8e-139 498.8 361 69.0
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 8.1e-139 498.0 408 64.2
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 5.8e-137 491.9 411 60.6
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 1.7e-136 490.3 362 65.5
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 8.4e-136 488.0 352 67.0
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 1.3e-133 480.7 411 59.1
COL.COLO4_13460 Corchorus olitorius HOM05D006774 ORTHO05D008411 3.9e-133 479.2 409 64.3
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 3.9e-133 479.2 415 59.5
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 5.1e-133 478.8 412 60.0
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 6.7e-133 478.4 417 59.0
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 1.1e-132 477.6 413 58.4
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 1.9e-132 476.9 419 61.1
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 1.3e-131 474.2 420 58.8
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 1.3e-131 474.2 415 59.3
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 1.6e-131 473.8 357 65.0
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 3.7e-131 472.6 357 64.7
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 3.7e-131 472.6 420 61.0
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 6.3e-131 471.9 415 59.0
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 1.1e-130 471.1 362 61.3
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 3.4e-129 466.1 415 61.2
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 4.5e-129 465.7 428 59.3
vmacro05013 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 4.5e-129 465.7 354 62.7
vmacro23279 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 4.5e-129 465.7 354 62.7
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 1.7e-128 463.8 352 63.1
CSS0040526 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 2.9e-128 463.0 400 58.5
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 1.1e-127 461.1 361 64.5
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 1.4e-127 460.7 359 63.0
RhsimUnG0226700 Rhododendron simsii HOM05D006774 ORTHO05D008411 1.9e-127 460.3 351 64.7
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 3.2e-127 459.5 416 55.5
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 9.3e-127 458.0 417 56.6
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 1.6e-126 457.2 412 57.0
Nn1g02268 Nelumbo nucifera HOM05D006774 ORTHO05D008411 3.0e-125 453.0 399 55.9
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 8.7e-125 451.4 364 60.7
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 8.7e-125 451.4 423 55.8
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 1.5e-124 450.7 425 52.7
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 2.5e-124 449.9 357 60.8
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 3.3e-124 449.5 412 54.1
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 7.4e-124 448.4 357 60.5
Lj9C82T10 Lonicera japonica HOM05D006774 ORTHO05D008411 1.8e-122 443.7 409 58.9
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 3.4e-121 439.5 418 55.7
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 3.4e-121 439.5 345 62.3
AL1G65540 Arabidopsis lyrata HOM05D006774 ORTHO05D008411 7.7e-121 438.3 424 53.8
Lj9C83T13 Lonicera japonica HOM05D006774 ORTHO05D008411 1.7e-120 437.2 409 56.5
Sabra13G0023900 Salix brachista HOM05D006774 ORTHO05D008411 1.7e-120 437.2 420 60.0
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 5.0e-120 435.6 417 55.9
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 6.5e-120 435.3 416 54.3
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 2.5e-119 433.3 420 56.4
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 2.5e-119 433.3 420 56.4
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 4.2e-119 432.6 359 58.2
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 5.5e-119 432.2 419 53.7
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 2.7e-118 429.9 417 54.7
BcaC09g49602 Brassica carinata HOM05D006774 ORTHO05D008411 3.6e-118 429.5 417 53.2
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 7.9e-118 428.3 361 57.1
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 2.3e-117 426.8 417 56.4
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 2.3e-117 426.8 363 56.2
AT1G54990 Arabidopsis thaliana HOM05D006774 ORTHO05D008411 3.0e-117 426.4 424 55.7
C01p34610 Brassica napus HOM05D006774 ORTHO05D008411 5.1e-117 425.6 417 52.8
BolC1t03432H Brassica oleracea HOM05D006774 ORTHO05D008411 5.1e-117 425.6 417 52.8
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 8.8e-117 424.9 412 54.6
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 8.8e-117 424.9 363 57.9
Lsat_1_v5_gn_9_86761 Lactuca sativa HOM05D006774 ORTHO05D008411 2.5e-116 423.3 413 53.5
BcaB04g20150 Brassica carinata HOM05D006774 ORTHO05D008411 3.3e-116 422.9 423 55.6
BraA01t02861Z Brassica rapa HOM05D006774 ORTHO05D008411 4.3e-116 422.5 414 53.6
Psat0s3041g0040 Pisum sativum HOM05D006774 ORTHO05D008411 7.4e-116 421.8 353 57.8
A01p27210 Brassica napus HOM05D006774 ORTHO05D008411 1.3e-115 421.0 414 53.6
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 6.3e-115 418.7 363 55.6
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 1.4e-114 417.5 365 57.8
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 4.1e-114 416.0 421 51.5
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 6.9e-114 415.2 363 54.5
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 1.2e-113 414.5 419 52.0
Lj9C84T1 Lonicera japonica HOM05D006774 ORTHO05D008411 7.7e-113 411.8 333 60.4
HanXRQChr11g0338551 Helianthus annuus HOM05D006774 ORTHO05D008411 7.2e-111 405.2 413 53.0
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 1.5e-108 397.5 366 53.3
AUR62000820 Chenopodium quinoa HOM05D006774 ORTHO05D008411 5.7e-108 395.6 316 58.2
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 1.4e-106 391.0 284 66.2
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 1.0e-101 374.8 406 46.8
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 2.3e-101 373.6 279 61.6
CDE05G2690 Ceratophyllum demersum HOM05D006774 ORTHO05D008411 1.2e-94 351.3 361 47.6
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 2.6e-92 343.6 276 59.8
AUR62005151 Chenopodium quinoa HOM05D006774 ORTHO05D008411 1.2e-89 334.7 272 57.7
Dinv40294 Davidia involucrata HOM05D006774 ORTHO05D008411 2.0e-84 317.4 311 53.4
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 6.3e-83 312.4 275 56.4
Actinidia05698 Actinidia chinensis HOM05D006774 ORTHO05D008411 1.2e-70 271.6 191 66.0
unitig_736.g22755 Utricularia gibba HOM05D006774 ORTHO05D008411 2.7e-65 253.8 365 38.1
Zm00001eb197590 Zea mays HOM05D006774 ORTHO05D008411 3.5e-65 253.4 350 40.0
Os11g0544100 Oryza sativa ssp. japonica HOM05D006774 ORTHO05D008411 1.5e-60 238.0 367 37.9
Pp3c11_22860 Physcomitrium patens HOM05D006774 ORTHO05D008411 1.4e-58 231.5 347 36.6
PSO478G2742 Papaver somniferum HOM05D006774 ORTHO05D008411 3.5e-57 226.9 311 44.1
Atru.chr12.689 Acer truncatum HOM05D006774 ORTHO05D008411 7.6e-52 209.1 191 56.0
PSO782G1046 Papaver somniferum HOM05D006774 ORTHO05D008411 2.1e-49 201.1 293 42.3
SMO145G0196 Selaginella moellendorffii HOM05D006774 ORTHO05D008411 2.5e-39 167.5 381 32.8
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 6.0e-33 146.4 176 50.6
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 8.7e-32 142.5 171 48.0
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 1.1e-31 142.1 169 47.3
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 2.5e-31 141.0 162 48.1
HPP92_006104 Vanilla planifolia HOM05D006774 ORTHO05D008411 1.7e-27 128.3 132 49.2
Oeu035485.2 Olea europaea HOM05D006774 ORTHO05D001341 2.9e-11 74.3 84 47.6
VMungo1127G0243 Vigna mungo HOM05D006774 ORTHO05D008411 2.3e-08 64.7 74 45.9
Nitab4.5_0010934g0020 Nicotiana tabacum HOM05D006774 ORTHO05D008411 7.4e-07 59.7 59 45.8


User provided reference genes

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